prot_E-siliculosus-1a_M_contig8.16210.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16210.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16210.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length155
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: D7FX78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX78_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 5.560e-108
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQKGGGL 154
            MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAG+EKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQKGGGL
Sbjct:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGVEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQKGGGL 154          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: A0A835Z8X1_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X1_9STRA)

HSP 1 Score: 184 bits (468), Expect = 3.680e-57
Identity = 88/146 (60.27%), Postives = 113/146 (77.40%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRES 146
            MS VRTVRMRVPAG AKPGPAIGQALGPLGINMM+FCK FN +T+H++ +TP P  L+A+++R+F F + TP T+W+LKRCA I+KG    G E  G VG KA+YEIAK+K  + H   LPL+ + +SV +TALSMGL+I DD ++
Sbjct:    1 MSLVRTVRMRVPAGMAKPGPAIGQALGPLGINMMDFCKSFNAKTQHLLPDTPTPVVLSAFSNRTFEFVIKTPPTSWLLKRCAKIDKGAKMPGLEIVGSVGTKAIYEIAKIKARDQHLDWLPLDGIARSVASTALSMGLKIRDDMKA 146          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: A0A7S2CHZ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHZ2_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.330e-55
Identity = 85/144 (59.03%), Postives = 110/144 (76.39%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDR 144
            MS VRTVR+RVPAG AKPGPAIGQALGPLGINMMEFCK FN+ T  +V++TP+P  LTAY +R+FTF   +P TTW LK  AG+EKG +R GHE  G+V LK ++EIAK+K  ++H   +PL  +C+S+  TA SMG+ ++ D+
Sbjct:   12 MSIVRTVRLRVPAGNAKPGPAIGQALGPLGINMMEFCKAFNDSTTKLVKDTPIPVLLTAYANRTFTFVNKSPPTTWFLKNAAGLEKGTTRPGHEMVGEVTLKQVFEIAKIKQQDEHLAHVPLRGLCRSIVGTAGSMGITVISDQ 155          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: A0A7S2STT6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STT6_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.460e-54
Identity = 82/140 (58.57%), Postives = 107/140 (76.43%), Query Frame = 0
Query:    5 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDR 144
            R V++RVPAG+AKPGPAIGQALGPLGINMMEFCK FN+ T+ +  NTP+P  LTA T+R+FTF   +P T+W LKRCAGI+KG  R GH   G V ++ +YEIAK K  +DH   L L+S+C+S+ A+A SMG+++ +DR
Sbjct:    6 RIVKLRVPAGSAKPGPAIGQALGPLGINMMEFCKAFNQATEQLAPNTPIPVRLTAMTNRTFTFVTKSPPTSWFLKRCAGIDKGAQRPGHSVVGSVSVQQVYEIAKAKQQDDHLQHLHLKSLCQSIIASATSMGIQVTNDR 145          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: A0A7R9UAQ2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAQ2_9STRA)

HSP 1 Score: 171 bits (432), Expect = 5.780e-51
Identity = 81/141 (57.45%), Postives = 104/141 (73.76%), Query Frame = 0
Query:    5 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRE 145
            R V++ VPAG AKPGPAIGQ+LGPLG+NM EFCK FN +T    QN P+P  L AY DRSF   L +P+T+W LK+CAGIEKG ++ G+E  G V LK +Y IAK+K  + H  L PL+S+C+SV  +A S+GLE+VDDR+
Sbjct:   57 RLVKLLVPAGAAKPGPAIGQSLGPLGLNMAEFCKTFNAKTSSYEQNVPIPVVLFAYEDRSFELWLKSPRTSWFLKQCAGIEKGAAKPGYETVGHVTLKEVYHIAKLKQRDHHLWLTPLQSICRSVLGSAASLGLEVVDDRQ 197          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: A0A6V2RJT6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RJT6_HETAK)

HSP 1 Score: 168 bits (425), Expect = 1.010e-50
Identity = 82/142 (57.75%), Postives = 100/142 (70.42%), Query Frame = 0
Query:    5 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRES 146
            R V +RV AG AKPGPAIGQALGPLGINMMEFCK FNE TK +    P P +L+AY DRSF F   +P T+W LKRCAGI+KG  R G+E  G V LK +YEI   K  + H   LP E++ +S+  +A SMGL++VDDRE+
Sbjct:    7 RVVNLRVAAGVAKPGPAIGQALGPLGINMMEFCKAFNERTKDLTPEIPTPVKLSAYEDRSFDFTTQSPPTSWFLKRCAGIQKGSGRPGYEAAGTVTLKQVYEIVLAKQKDAHLWHLPPEALARSIIGSAASMGLKVVDDRET 148          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: A0A7S2RUG3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RUG3_9STRA)

HSP 1 Score: 158 bits (400), Expect = 4.800e-47
Identity = 71/135 (52.59%), Postives = 102/135 (75.56%), Query Frame = 0
Query:    6 TVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEI 140
            T R+ VPAG AKP PAIGQALGPLG+NMM+FCK FN +T++   N P+P +LTAY DR+F F + TP T+W++K+ +GIEKG S  G E  G + +KA+YEIAK+K ++ +   +PL+S+CK+V ++  SMG+++
Sbjct:    8 TCRLLVPAGAAKPSPAIGQALGPLGVNMMDFCKGFNAQTENFQPNIPLPVKLTAYGDRTFKFDVKTPHTSWLIKKASGIEKGSSTPGSEIVGTLSVKAVYEIAKLKQSDPNLASIPLKSLCKTVMSSCKSMGIKV 142          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: A0A7S1BAR1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAR1_9STRA)

HSP 1 Score: 158 bits (399), Expect = 8.460e-47
Identity = 76/145 (52.41%), Postives = 105/145 (72.41%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYC-GKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDR 144
            MS+VR+V +RVPA  A+PGPAIGQALGPLG+NM EFCK+FNE T   V +  +P  L A+ DR+F F + +P T+ M+KR AG+EKG  R G +   G + ++A+YEIAK+K  + H   +P+ SV KS+  TALSMG+E++DD+
Sbjct:    1 MSYVRSVLLRVPAAAARPGPAIGQALGPLGVNMAEFCKQFNERTAGYVSSWTLPVRLDAFADRTFEFHVRSPPTSHMIKRAAGLEKGAGRPGAQSAVGSIRVEAVYEIAKIKVQDTHLADMPIRSVAKSIVGTALSMGVEVIDDK 145          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: A0A7S1C344_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C344_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.760e-46
Identity = 76/135 (56.30%), Postives = 100/135 (74.07%), Query Frame = 0
Query:    8 RMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVGLKALYEIAKVKNA-EDHSVLLPLESVCKSVRATALSMGLEIV 141
            RMRV AG AKP PAIGQALGPLG+NMMEFCK FN+ T  +V  TPM   LTA+ DR+FTF + +P  +W LKR AG++KG +  GH+  GKVGL+A+YEIA +K   +DH   LP+ ++ ++V ATA SMG+++V
Sbjct:    9 RMRVLAGAAKPSPAIGQALGPLGVNMMEFCKSFNDRTGALVSETPMRVHLTAFQDRTFTFDVLSPDVSWFLKRAAGVDKGATSPGHDSPGKVGLRAVYEIAALKQRHDDHLSALPMPALVRNVCATAKSMGIKVV 143          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Match: A0A3R7K313_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K313_9STRA)

HSP 1 Score: 156 bits (395), Expect = 3.030e-46
Identity = 75/135 (55.56%), Postives = 95/135 (70.37%), Query Frame = 0
Query:    7 VRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIV 141
            VR+RV AG A P PAIGQALGPLG+NMMEFCK FNE T  IV+N P+P  LTAYTDR+F F   TP T+W LK+ AGI  G +  G    G V L+ +YEIAKVK  ++    + L+S+CK++  +A SMGL++V
Sbjct:   12 VRLRVLAGKASPSPAIGQALGPLGVNMMEFCKAFNERTSKIVENVPVPVVLTAYTDRTFNFATKTPPTSWFLKKAAGISSGSATPGQAVVGSVSLRQIYEIAKVKQQDEMVDYIDLQSICKTLIGSAKSMGLDVV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX78_ECTSI5.560e-10899.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z8X1_9STRA3.680e-5760.27Ribosomal protein L11 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2CHZ2_9STRA1.330e-5559.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2STT6_9STRA1.460e-5458.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9UAQ2_9STRA5.780e-5157.45Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6V2RJT6_HETAK1.010e-5057.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RUG3_9STRA4.800e-4752.59Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S1BAR1_9STRA8.460e-4752.41Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1C344_9STRA2.760e-4656.30Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A3R7K313_9STRA3.030e-4655.56Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 7..141
e-value: 5.7E-55
score: 198.6
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 5..142
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 3..142
score: 22.964
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 4..65
e-value: 1.7E-26
score: 91.8
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMTIGR01632TIGR01632coord: 4..142
e-value: 6.4E-45
score: 150.5
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 68..141
e-value: 2.6E-25
score: 90.2
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 66..140
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 71..140
e-value: 2.3E-20
score: 72.8
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 2..67
e-value: 7.8E-29
score: 101.2
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 4..70
NoneNo IPR availablePANTHERPTHR11661:SF139S RIBOSOMAL PROTEIN L11, MITOCHONDRIALcoord: 5..142
NoneNo IPR availablePRODOMPD001367coord: 34..72
e-value: 5.0E-8
score: 134.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:2054187..2058023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16210.1mRNA_E-siliculosus-1a_M_contig8.16210.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 2053994..2058523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16210.1 ID=prot_E-siliculosus-1a_M_contig8.16210.1|Name=mRNA_E-siliculosus-1a_M_contig8.16210.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=155bp
MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQN
TPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYCGKVG
LKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQK
GGGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036796Ribosomal_L11/L12_N_sf
IPR020783Ribosomal_L11_C
IPR036769Ribosomal_L11_C_sf
IPR006519Ribosomal_L11_bac-typ
IPR020784Ribosomal_L11_N
IPR000911Ribosomal_L11/L12