mRNA_E-siliculosus-1a_M_contig8.16161.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: D8LQC4_ECTSI (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC4_ECTSI) HSP 1 Score: 557 bits (1435), Expect = 1.540e-195 Identity = 281/303 (92.74%), Postives = 286/303 (94.39%), Query Frame = 1
Query: 178 MYSSGHHSAMGPPSRRQHXXXXXXXXXPSDTSSADEMDTSPDMSPRSGDGLGGAKRWPPAEEHGGAAAGVFENGEYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGNGKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQ 1086
MYSSGHH+AMGPPSRRQHXXXXXXXXXPSDTSSADEMDTSPD+SPRSGDGLGGAKRWPPAEEHGGAAAGVFENGEYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFP+NRQPGTE GGSYGLEGNGKVFSG+GVGQTFG PF TGDTVGLGVNFKKMEVFLTHNGRLLG AFP IRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFD+SASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQ
Sbjct: 1 MYSSGHHAAMGPPSRRQHXXXXXXXXXPSDTSSADEMDTSPDISPRSGDGLGGAKRWPPAEEHGGAAAGVFENGEYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPVNRQPGTE-------------GGSYGLEGNGKVFSGSGVGQTFGAPFCTGDTVGLGVNFKKMEVFLTHNGRLLGAAFPTIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDVSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQ 290
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: A0A6H5JHG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHG5_9PHAE) HSP 1 Score: 567 bits (1461), Expect = 1.770e-188 Identity = 291/325 (89.54%), Postives = 297/325 (91.38%), Query Frame = 1
Query: 178 MYSSGHHSAMGPPSRRQHXXXXXXXXXPSDTSSADEMDTSPDMSPRSGDGLGGAKRWPPAEEHGGAAAGVFENGEYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGNGKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEADECGAANVTA 1152
MYSSGHH+AMGPPSRRQHXXXXXXXX PSDT SADEMDTSPD+SPR DGLGGAKRWPPAEEHG AAGVFENGEYLPSAMDTTQPCYHAVC RDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTE GGSYGLEGNGKVFSG+GVGQTFG PF TGDTVGLGVNFKKME FLTHNGRLLG AFPAIR ALDVHGLYPCVGLHSRGEAVHLNFGRRPYLF++SASVA EDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEAD+ GAA VTA
Sbjct: 1 MYSSGHHAAMGPPSRRQHXXXXXXXXQPSDTLSADEMDTSPDISPRRVDGLGGAKRWPPAEEHGDVAAGVFENGEYLPSAMDTTQPCYHAVCARDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTE-------------GGSYGLEGNGKVFSGSGVGQTFGDPFCTGDTVGLGVNFKKMEGFLTHNGRLLGSAFPAIRSALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFNVSASVAKEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEADKGGAAKVTA 312
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: A0A1Y1I3W8_KLENI (Spla ryanodine receptor domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3W8_KLENI) HSP 1 Score: 180 bits (456), Expect = 1.060e-46 Identity = 104/248 (41.94%), Postives = 136/248 (54.84%), Query Frame = 1
Query: 382 GVFENG--EYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGN-GKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLD 1116
G E G E PS ++T +DKL VRY G G H D G+++AN P+PR + ++YFE T+ +G+ CI +G +F +RQPG EA GSYG G+ GK + +G G +G F TGD VG GVN E+F T NG+ LG AF +R LYP VGLHS+ E V +NFG+RP+ FDL A V E R Q AV V + + S+VR YLLH G + TL + D
Sbjct: 67 GTDEEGAEEEAPSELNTRNYGGFLEVGKDKLSVRYTGHGQHGHDVGSIQANRPVPRERLLYYFELTVRDRGDRNCIAIGFTDENFKHSRQPGWEA-------------GSYGYHGDDGKAYHASGRGDAYGPTFTTGDVVGAGVNHATQEIFFTKNGKHLGVAFADVR-----EILYPTVGLHSKNERVEVNFGKRPFKFDLEALVQEERERRQRAVELVEMPSSISHSIVRGYLLHYGYQDTLNAFD 296
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: A0A836BBQ5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBQ5_9CHLO) HSP 1 Score: 175 bits (444), Expect = 5.720e-45 Identity = 104/253 (41.11%), Postives = 143/253 (56.52%), Query Frame = 1
Query: 400 EYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGN-GKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEADECGAANVTAA 1155
E LPSA++T + H + +DKL VRY G H D G ++ANHP+P + ++Y+E TI G + I +G +F + RQPG E GSYG G+ GK F G+G+G+ +G F GDTVG G++ + E+F T NG L A +R GLYP +GLHS+GE V LNFG +P++FD+ +A E ++AAV +PV P +LVR YLLH G TL + D A A +TAA
Sbjct: 5 EPLPSALNTARQG-HGLELKDKLTVRYAGDARHNNDVGAIQANHPVPVNCTVYYYELTILDGGISGKIAIGFADKNFKVTRQPGWEV-------------GSYGYHGDDGKKFIGSGMGEDYGPTFGAGDTVGAGIHLGRQELFFTKNGTKLKAAHRPVR-----GGLYPTIGLHSKGEMVQLNFGAKPFVFDIEGMLAEERAAQRAAVERIPVAPGTSHALVRQYLLHYGYADTLAAFDAA-----AGITAA 233
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: A0A835TEN8_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TEN8_CHLIN) HSP 1 Score: 173 bits (439), Expect = 2.840e-44 Identity = 103/253 (40.71%), Postives = 143/253 (56.52%), Query Frame = 1
Query: 400 EYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGN-GKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEADECGAANVTAA 1155
E LPSA+++ + H + +DKL VRY G H D G ++ANHP+P + ++Y+E T+ G + I +G +F + RQPG E GSYG G+ GK F G+G+G+ +G F GDTVG G++ + E+F T NG L A +R GLYP +GLHS+GE V LNFG RP++FDL +A E ++AAV +PV P +LVR YLL+ G TL + D A A +TAA
Sbjct: 5 EPLPSALNSARQG-HGLELKDKLTVRYAGDARHNNDVGAIQANHPVPVNCTVFYYELTVLDGGISGKIAIGFADKNFKLTRQPGWEV-------------GSYGYHGDDGKKFIGSGMGEDYGPTFGAGDTVGAGIHLGRQELFFTKNGTKLKAAHRPVR-----GGLYPTIGLHSKGEMVQLNFGARPFVFDLEGMLAEERAAQRAAVERIPVSPGTSHALVRQYLLYHGYADTLAAFDRA-----AGITAA 233
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: A0A8J4BLG1_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BLG1_9CHLO) HSP 1 Score: 172 bits (435), Expect = 5.770e-44 Identity = 93/228 (40.79%), Postives = 130/228 (57.02%), Query Frame = 1
Query: 442 HAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGN-GKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEA 1122
H + +DK VRY H D G ++ANHP+P + ++Y+E T+ G I +G SF + RQPG EA GS+G G+ GK F G G G+ +G F TGDTVG G++ + E+F T NG L A+ +R GLYP +GLHS+GE V +NFG++P++FDL +A E +AA+ +PV P + +VR YLLH G E TL++ DEA
Sbjct: 22 HGLELKDKFTVRYASDARHTNDVGAIQANHPVPPNCTVYYYELTVLDSGIYGKIAIGFADKSFKLTRQPGWEA-------------GSFGYHGDDGKKFIGLGNGEDYGPTFGTGDTVGAGIHLGRQELFFTKNGTKLKVAYRPVRA-----GLYPTIGLHSKGETVLVNFGQKPFVFDLEGMLAEEKAAHRAAIDRIPVSPGITHEIVRQYLLHYGYEDTLRAFDEA 231
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: A0A835XIV1_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XIV1_9CHLO) HSP 1 Score: 171 bits (433), Expect = 9.820e-44 Identity = 99/242 (40.91%), Postives = 135/242 (55.79%), Query Frame = 1
Query: 442 HAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGN-GKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEADECGAANVTAAATA 1164
H + +DKL VRY G H D G ++ANH +P + ++Y+E TI QG I +G +F + RQPG E GSYG G+ GK F G+G+G+ +G F GDTVG G++ + E+F T NG L A +R GLYP VGLHS+GE V +NFG +P++FDL +A E ++AAV +PV LVR YLLH G E TL++ DEA G +++A A
Sbjct: 23 HGLELKDKLTVRYASDGRHNNDVGAIQANHSVPSNCTVYYYEVTILDQGIAGKIAVGFADKNFKLTRQPGWEV-------------GSYGYHGDDGKKFCGSGMGEEYGPTFGAGDTVGAGIHLGRQELFFTKNGTKLKLAHRPVRA-----GLYPTVGLHSKGEMVQVNFGAKPWVFDLEGMLAEERAVQRAAVQRIPVSSGTSHQLVRQYLLHYGYEDTLRAFDEAAGLGGEGASSSAPA 246
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: A8J131_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J131_CHLRE) HSP 1 Score: 168 bits (426), Expect = 2.040e-43 Identity = 97/242 (40.08%), Postives = 137/242 (56.61%), Query Frame = 1
Query: 400 EYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGN-GKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEA 1122
E LPSA+++ + H + +DKL VRY G H D G ++ANHP+ + ++Y+E T+ G + I +G +F + RQPG E GSYG G+ GK F G+G+G+ +G F GDTVG G++ + E+F T NG L A +R GLYP +GLHS+GE V +NFG +P++FDL +A E ++AAV +PV P +LVR YLLH G TL + D A
Sbjct: 5 EPLPSALNSARQG-HGLELKDKLTVRYAGDARHNNDVGAIQANHPVSVNCTVFYYELTVLDGGISGKIAIGFADKNFKLTRQPGWEV-------------GSYGYHGDDGKKFIGSGMGEDYGPTFGGGDTVGAGIHLGRQELFFTKNGTKLKAAHRPVR-----GGLYPTIGLHSKGEMVQVNFGAKPFVFDLEGMLAEERAAQRAAVERIPVSPGTSHALVRQYLLHYGYADTLAAFDAA 227
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: A0A2K3DDV6_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DDV6_CHLRE) HSP 1 Score: 168 bits (426), Expect = 1.790e-42 Identity = 97/242 (40.08%), Postives = 137/242 (56.61%), Query Frame = 1
Query: 400 EYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGN-GKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEA 1122
E LPSA+++ + H + +DKL VRY G H D G ++ANHP+ + ++Y+E T+ G + I +G +F + RQPG E GSYG G+ GK F G+G+G+ +G F GDTVG G++ + E+F T NG L A +R GLYP +GLHS+GE V +NFG +P++FDL +A E ++AAV +PV P +LVR YLLH G TL + D A
Sbjct: 5 EPLPSALNSARQG-HGLELKDKLTVRYAGDARHNNDVGAIQANHPVSVNCTVFYYELTVLDGGISGKIAIGFADKNFKLTRQPGWEV-------------GSYGYHGDDGKKFIGSGMGEDYGPTFGGGDTVGAGIHLGRQELFFTKNGTKLKAAHRPVR-----GGLYPTIGLHSKGEMVQVNFGAKPFVFDLEGMLAEERAAQRAAVERIPVSPGTSHALVRQYLLHYGYADTLAAFDAA 227
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Match: A0A8J4BYU5_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4BYU5_9CHLO) HSP 1 Score: 168 bits (425), Expect = 2.020e-42 Identity = 94/228 (41.23%), Postives = 129/228 (56.58%), Query Frame = 1
Query: 442 HAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEARKAYSLCFACLTGGSYGLEGN-GKVFSGTGVGQTFGTPFFTGDTVGLGVNFKKMEVFLTHNGRLLGPAFPAIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDLSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQGCEKTLKSLDEA 1122
H + +DK VRY H D G ++ANHP+P + ++Y+E T+ G I +G SF + RQPG EA GSYG G+ GK F G G G+ +G F TGDTVG G++ + E+F T NG L A +R GLYP +GLHS+GE V +NFG++P++FDL +A E ++AAV +PV + LVR YLLH G ++TL + DEA
Sbjct: 22 HGLELKDKFTVRYANDARHSNDVGAIQANHPVPPNCTVYYYELTVLDSGIFGKIAIGFADKSFKLTRQPGWEA-------------GSYGYHGDDGKKFIGHGNGEDYGPTFGTGDTVGAGIHLGRQELFFTKNGTRLKVAHRPVRA-----GLYPTIGLHSKGEIVQVNFGQKPFVFDLEGMLAEEKAAQRAAVDRIPVSSGVTHKLVRQYLLHYGYKETLCAFDEA 231 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16161.1 >prot_E-siliculosus-1a_M_contig8.16161.1 ID=prot_E-siliculosus-1a_M_contig8.16161.1|Name=mRNA_E-siliculosus-1a_M_contig8.16161.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=551bp NAVLRDEAWPVASRRRRHTNWVKEEQQSGCEASSVRHNLLLQRNRDGAQSback to top mRNA from alignment at E-siliculosus-1a_M_contig8:1479511..1485519+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16161.1 ID=mRNA_E-siliculosus-1a_M_contig8.16161.1|Name=mRNA_E-siliculosus-1a_M_contig8.16161.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6009bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1479511..1485519+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1479511..1485519+ >mRNA_E-siliculosus-1a_M_contig8.16161.1 ID=mRNA_E-siliculosus-1a_M_contig8.16161.1|Name=mRNA_E-siliculosus-1a_M_contig8.16161.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3306bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1479511..1485519+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |