prot_E-siliculosus-1a_M_contig8.16157.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16157.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16157.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length636
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A6H5JYU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU7_9PHAE)

HSP 1 Score: 478 bits (1231), Expect = 2.840e-160
Identity = 438/637 (68.76%), Postives = 443/637 (69.54%), Query Frame = 0
Query:    1 MRAEARGGGSPKTVDRVLGVLVAACASALLVALGARAGARARASFTTLLRLAYEGSSXXXXXXXXXXXXXXXXXXGDAYFEYAHGSRSTAAAGXXXXXXXXXXGLVLHAGSCHCGGLAFEVEAPEHLAAIEGPSKVRYPFITVPAEQFRLTSDDTNGSLYLLKCRPPAGSDNTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSLAVAFPRRGGGELPGIGDPV--MYEVGRESWSDAVQERVSVALRDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGQGGLGQGVGDERGASRAELLVGXXXXXXXXXVSRGTAPDFSTLRRGAEEREXXXXXXXXXXXXXXXXXXXXXXXXXRDTWGDVLMHVASLPSXXXXXXXXXXXXXXXXXXLLPRKPSSTRQQPHXXXXXQPNGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGGGELSRRAGDGRGAGAPGANSWGVNGYPVGGGVPGSGMQRRRSRSVDSTPATPHASAVISSPGAEGVASKDSDDGEESSGGSRSFASMVGRXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXSVMSGGYAAAQA 635
            MRA A  GGSPKTVDRVLGVLVAACASALLVALGARAG    ASFTTLLRLAY+GSS         XXXXXX   GDAYFEYAHGSRSTAAA XXXXXX    GLVLHAGSCHCGGLAFEVEAPEHLAAIEGPSKVRYPFITVPAEQFRLTSDDTNGSLYLL+ RPPAGSD+TPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSLAVAFPRRGGGELPGIGDPV  MYE  R S                                                                   G   G  RG                                                              XRDTWGDVLMHVASLPSXXXXXXXXXXXXXXXXXX              XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GEGGGGELSRRAGDGR AGAPG NSWGVNGYPVGGGVPGSG QRRRSRSVDSTPATPHAS VI+SPGAEGVASKDSDDGEESSGGSRSFASMVGRXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXS M+GGYAAAQA
Sbjct:    1 MRAAAPVGGSPKTVDRVLGVLVAACASALLVALGARAGXXXGASFTTLLRLAYQGSSTSSKRRSSRXXXXXX---GDAYFEYAHGSRSTAAARXXXXXXAGRGGLVLHAGSCHCGGLAFEVEAPEHLAAIEGPSKVRYPFITVPAEQFRLTSDDTNGSLYLLQYRPPAGSDDTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSLAVAFPRRGGGELPGIGDPVEGMYEARRHS------------------------------------------------------------------SGTDSGGRRGXXXXXXXX------------------------------------------------------XRDTWGDVLMHVASLPSXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPRGEGGGGELSRRAGDGRRAGAPGTNSWGVNGYPVGGGVPGSGGQRRRSRSVDSTPATPHASTVIASPGAEGVASKDSDDGEESSGGSRSFASMVGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAMTGGYAAAQA 507          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A835Z3S2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S2_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.690e-34
Identity = 80/183 (43.72%), Postives = 104/183 (56.83%), Query Frame = 0
Query:   77 DAYFEYAHGSRSTAAAGXXXXXXXXXXGLVLHAGSCHCGGLAFEVEAPEHLAAIEGPSKVRYPFITVPAEQFRLTSDDTNGSLYLLKCRPPAGSDNTPK-------------------------VSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSLAVAFPRRGGGELPGIGDP 234
            DAY++ A+GSRS +              +V+H GSCHCG + FEV+APEHLAA+EG SK+RYPFI VPA +F+LTSD++  SLYL+K    A     P                          V+AH FC  CGVH+ HAP+FP++AVA VN  C+   ++ SLAVA        LPG+G P
Sbjct:   75 DAYYQXAYGSRSQSGV------------MVMHTGSCHCGNMTFEVQAPEHLAAVEGGSKLRYPFIIVPAGRFKLTSDESYCSLYLVKSPSAAAPHAQPTLDSSSCXXXXXXXXXXXXXXADVIHVAAHLFCSNCGVHVCHAPNFPNSAVAHVNAQCLDARSVASLAVAV-LSDAALLPGVGAP 244          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A2A4VQ08_9PROT (Aldehyde-activating protein n=1 Tax=Kordiimonadales bacterium TaxID=2030814 RepID=A0A2A4VQ08_9PROT)

HSP 1 Score: 66.2 bits (160), Expect = 1.830e-9
Identity = 38/116 (32.76%), Postives = 59/116 (50.86%), Query Frame = 0
Query:  105 LVLHAGSCHCGGLAFEVEAPEHLAAIEGP----SKVRYPFITVPAEQFRLTSDDTNGSLYLLKCRPPAGSDNTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSL 216
            +V H GSCHCG +AFEV+AP  + A+       ++  +  + V  + FR+T+ + N + Y  K R           + H FC+ CGV   + P   H     VN++CI P T+ S+
Sbjct:    3 IVTHKGSCHCGSVAFEVDAPADIDAVSCTCSICTRTGFIHVFVGRDAFRITAGEDNLTEYRFKTR----------TAKHLFCKTCGVKAFYVPR-SHPNGWSVNLNCIDPETVTSV 107          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A661DA95_9GAMM (GFA family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661DA95_9GAMM)

HSP 1 Score: 66.2 bits (160), Expect = 1.930e-9
Identity = 44/121 (36.36%), Postives = 57/121 (47.11%), Query Frame = 0
Query:  108 HAGSCHCGGLAFEVEAPEHLAAIEGP----SKVRYPFITVPAEQFRLTSDDTNGSLYLLKCRPPAGSDNTPKVS------AHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSLAV 218
            H GSCHCG + FEVEAPEHL  +E      SK  Y  + VP  QF L                  GSDN  K +       H+FC+ CG+   + P      V+ VNV C+  +TIK + +
Sbjct:    3 HKGSCHCGAVVFEVEAPEHLHVLECNCSICSKSGYLHLIVPKSQFNLLK----------------GSDNLVKYTFDTHQEKHWFCQTCGIKSFYIPRSNPDGVS-VNVRCLDSSTIKRIDI 106          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A2N1XD30_9GAMM (Aldehyde-activating protein n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-4 TaxID=2013800 RepID=A0A2N1XD30_9GAMM)

HSP 1 Score: 64.7 bits (156), Expect = 7.010e-9
Identity = 41/115 (35.65%), Postives = 58/115 (50.43%), Query Frame = 0
Query:  108 HAGSCHCGGLAFEVEAPEHLAAIEGP----SKVRYPFITVPAEQFRLTSDDTNGSLYLLKCRPPAGSDNTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSLAV 218
            H GSCHCG +  EV+APE++ A E       +  +  + VP   FRL   +   S+Y           NT  V+ H+FC+ CG    + P       + VNV C+H ATIKSL++
Sbjct:    3 HTGSCHCGAVEVEVDAPENIEAYECNCSMCERTGFLHLIVPRSAFRLVRGERALSVYTF---------NTG-VAKHYFCKHCGCKPYYVPRSNPDGFS-VNVRCLHGATIKSLSI 106          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A7S1Y434_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y434_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 9.580e-9
Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 0
Query:  105 LVLHAGSCHCGGLAFEVEAPEHLAAIEGPSK--VRYPFITVPAEQFRLT-SDDTNGSLYLLKCRPPAGSDNTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCI 208
            +++H G CHC  + FE+ AP+ L       +  ++YPF+T  A  F+L    D  G  Y+           +  V+AH FC+RCGVH++ APD  H     VN +C+
Sbjct:  135 VMMHRGHCHCKAIEFELLAPKLLRTTISSQRGEIQYPFVTTEAPNFKLVRGSDVLGIYYVSVPTVTKSPGISATVAAHSFCKRCGVHVLQAPD-SHTNSLRVNANCL 240          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A8J7J3I8_9CYAN (GFA family protein n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7J3I8_9CYAN)

HSP 1 Score: 63.5 bits (153), Expect = 1.690e-8
Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 0
Query:  106 VLHAGSCHCGGLAFEVEAPEHLAAIEGP----SKVRYPFITVPAEQFRLTSDDTNGSLYLLKCRPPAGSDNTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCI 208
            +++ GSCHCG + FEVEAPEHL   E      SK  Y  + VP  +F+L S + N + Y  +            V+ H FC+ CG+   + P      V DVNV C+
Sbjct:    1 MIYQGSCHCGAITFEVEAPEHLEVDECNCSICSKSGYLHLIVPKNKFKLLSGEDNLATYTFQTG----------VAKHKFCKTCGIKSFYIPRSNPDGV-DVNVRCL 96          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A7Y3CPG4_9GAMM (GFA family protein n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y3CPG4_9GAMM)

HSP 1 Score: 62.0 bits (149), Expect = 5.840e-8
Identity = 40/118 (33.90%), Postives = 56/118 (47.46%), Query Frame = 0
Query:  105 LVLHAGSCHCGGLAFEVEAPEHLAAIEGPSKV----RYPFITVPAEQFRLTSDDTNGSLYLLKCRPPAGSDNTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSLAV 218
            +  H GSCHCG + FEV+AP  + A +    +     +  + V A  FRL   +   S Y           NT  V+ H+FCR CG+   + P   H     VNVHC+   TI+S+ V
Sbjct:    1 MTTHKGSCHCGQVRFEVDAPATIRADDCNCSICRKSGFLHLLVSAADFRLLQGEDELSSYTF---------NTG-VAKHYFCRHCGIKSFYIPR-SHPEGVSVNVHCLEMETIESIEV 107          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A2E6E9Y8_9GAMM (Aldehyde-activating protein n=1 Tax=Woeseia sp. TaxID=1980636 RepID=A0A2E6E9Y8_9GAMM)

HSP 1 Score: 62.0 bits (149), Expect = 6.590e-8
Identity = 41/118 (34.75%), Postives = 57/118 (48.31%), Query Frame = 0
Query:  105 LVLHAGSCHCGGLAFEVEAPEHLAAIEGPSKVRY----PFITVPAEQFRLTSDDTNGSLYLLKCRPPAGSDNTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSLAV 218
            +V+H GSCHCG + FEV+AP +L   E    + Y      I VP  +FRL       ++Y           NT KV+ H+FC  CGV   + P   H     VN  C++  T+ S+ V
Sbjct:    1 MVVHRGSCHCGKVKFEVDAPTNLEISECNCSICYMVGFQHIHVPKSRFRLLEGKDVLAVYKF---------NT-KVARHYFCPYCGVKSFYVPR-SHPDGISVNARCLNQETVSSIQV 107          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Match: A0A2S5MDM8_HYPSQ (Aldehyde-activating protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MDM8_HYPSQ)

HSP 1 Score: 60.8 bits (146), Expect = 1.550e-7
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0
Query:  106 VLHAGSCHCGGLAFEVEAPEHLAAIEGP----SKVRYPFITVPAEQFRLTSDDTNGSLYLLKCRPPAGSDNTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCI 208
            +LH GSCHCG +AFEVEAP+ + A +      +K  +  + VPA++FR+T    N + Y           NT  V+ H FC+ CG+   + P      + DVNV C+
Sbjct:    1 MLHTGSCHCGTVAFEVEAPDDIVAQDCNCSLCAKSGFLHLIVPAQKFRITRGAENLTTYTF---------NTG-VAKHTFCKICGIKPFYIPRSNPDGI-DVNVRCL 96          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYU7_9PHAE2.840e-16068.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z3S2_9STRA2.690e-3443.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2A4VQ08_9PROT1.830e-932.76Aldehyde-activating protein n=1 Tax=Kordiimonadale... [more]
A0A661DA95_9GAMM1.930e-936.36GFA family protein n=1 Tax=Gammaproteobacteria bac... [more]
A0A2N1XD30_9GAMM7.010e-935.65Aldehyde-activating protein n=1 Tax=Gammaproteobac... [more]
A0A7S1Y434_9STRA9.580e-934.58Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A8J7J3I8_9CYAN1.690e-836.45GFA family protein n=1 Tax=Lusitaniella coriacea L... [more]
A0A7Y3CPG4_9GAMM5.840e-833.90GFA family protein n=1 Tax=Woeseiaceae bacterium T... [more]
A0A2E6E9Y8_9GAMM6.590e-834.75Aldehyde-activating protein n=1 Tax=Woeseia sp. Ta... [more]
A0A2S5MDM8_HYPSQ1.550e-736.45Aldehyde-activating protein n=1 Tax=Hyphomicrobium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 452..479
NoneNo IPR availableGENE3D2.170.150.70coord: 109..224
e-value: 2.7E-9
score: 38.9
NoneNo IPR availablePANTHERPTHR28620FAMILY NOT NAMEDcoord: 104..266
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..635
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..43
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 107..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1454307..1461418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16157.1mRNA_E-siliculosus-1a_M_contig8.16157.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1453335..1462106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16157.1 ID=prot_E-siliculosus-1a_M_contig8.16157.1|Name=mRNA_E-siliculosus-1a_M_contig8.16157.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=636bp
MRAEARGGGSPKTVDRVLGVLVAACASALLVALGARAGARARASFTTLLR
LAYEGSSSSSSKRRSSRREEEEEEEGDAYFEYAHGSRSTAAAGARGAGGA
GGGGLVLHAGSCHCGGLAFEVEAPEHLAAIEGPSKVRYPFITVPAEQFRL
TSDDTNGSLYLLKCRPPAGSDNTPKVSAHFFCRRCGVHIVHAPDFPHAAV
ADVNVHCIHPATIKSLAVAFPRRGGGELPGIGDPVMYEVGRESWSDAVQE
RVSVALRDQQQQQQYQHGSVGGTGATPAGSSSSSSRALSPRRRSASDTTR
RGGGSGQGGLGQGVGDERGASRAELLVGGGGGAASGGVSRGTAPDFSTLR
RGAEERERARRHSSGTDSGGRRGSGSGGGGGGRDTWGDVLMHVASLPSSS
SSSTSASTAAGTAGSSLLPRKPSSTRQQPHYHHHQQPNGVGVGSGWGAGT
SELLLRTERERQQEQLQQQQQQQQQQRQRQPQQQIPRGEGGGGELSRRAG
DGRGAGAPGANSWGVNGYPVGGGVPGSGMQRRRSRSVDSTPATPHASAVI
SSPGAEGVASKDSDDGEESSGGSRSFASMVGRGGGGGGGAATSIFGVGKG
GSNGAQSYQQNGGGGGGLLLRPPSVMSGGYAAAQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011057Mss4-like_sf