prot_E-siliculosus-1a_M_contig8.16058.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16058.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16058.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length153
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16058.1 vs. uniprot
Match: D8LQM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQM0_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 1.730e-94
Identity = 144/156 (92.31%), Postives = 148/156 (94.87%), Query Frame = 0 
Query:    1 MQQAPVQLQYPGQQPQAAAIPPVGIPAMMPTTPGSMNMGTPGTVLPNGQFVPNAAPAQMSILPNGQVMAPPAGGGMTATAPGFPVHTQPPGVGP----VITREQQEFVGVPPGMTRESMAPGYDPRLKKQRRVFDPRYSFKDSFGNSRNKSCCTIS 152
            MQQAPVQ +YPGQQPQ+AAIPPVGIPAMMP TPGSMNMGTPGTVLPNGQFVPNA+PAQMS+LPNGQVMAPPAGGGMTA APGFPVHTQPPGVGP    VITREQQE VGVPPGMTRESMAPGYDPRLKKQRRVFDPRYSFKDSFGNSRNKSCCTIS
Sbjct:  120 MQQAPVQQRYPGQQPQSAAIPPVGIPAMMPATPGSMNMGTPGTVLPNGQFVPNASPAQMSVLPNGQVMAPPAGGGMTAGAPGFPVHTQPPGVGPNMGPVITREQQEIVGVPPGMTRESMAPGYDPRLKKQRRVFDPRYSFKDSFGNSRNKSCCTIS 275
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16058.1 vs. uniprot
Match: A0A6H5LQM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQM1_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.500e-73
Identity = 112/128 (87.50%), Postives = 116/128 (90.62%), Query Frame = 0 
Query:   29 MPTTPGSMNMGTPGTVLPNGQFVPNAAPAQMSILPNGQVMAPPAGGGMTATAPGFPVHTQPPGV----GPVITREQQEFVGVPPGMTRESMAPGYDPRLKKQRRVFDPRYSFKDSFGNSRNKSCCTIS 152
            M  TPGSMNMGTPGTVLPNGQFVPNA PAQMS+LPNGQVMAP A GGMTA A GFPVHTQPPGV    GPVITREQQ+ VGVPPGMTRESMAPGYDPRLKKQRRVFDPRYSFKDSFGNSRN+SCCT+S
Sbjct:    1 MSATPGSMNMGTPGTVLPNGQFVPNATPAQMSVLPNGQVMAPSAAGGMTAAAAGFPVHTQPPGVEPNLGPVITREQQQVVGVPPGMTRESMAPGYDPRLKKQRRVFDPRYSFKDSFGNSRNRSCCTVS 128
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQM0_ECTSI1.730e-9492.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LQM1_9PHAE2.500e-7387.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:307659..308117 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16058.1mRNA_E-siliculosus-1a_M_contig8.16058.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 307541..310962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16058.1 ID=prot_E-siliculosus-1a_M_contig8.16058.1|Name=mRNA_E-siliculosus-1a_M_contig8.16058.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=153bp
MQQAPVQLQYPGQQPQAAAIPPVGIPAMMPTTPGSMNMGTPGTVLPNGQF
VPNAAPAQMSILPNGQVMAPPAGGGMTATAPGFPVHTQPPGVGPVITREQ
QEFVGVPPGMTRESMAPGYDPRLKKQRRVFDPRYSFKDSFGNSRNKSCCT
IS*
back to top