mRNA_E-siliculosus-1a_M_contig8.16155.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Match: A0A6H5K1C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C8_9PHAE) HSP 1 Score: 265 bits (677), Expect = 8.830e-87 Identity = 145/189 (76.72%), Postives = 153/189 (80.95%), Query Frame = -2
Query: 39 PAKGKRHQAGRAAHV----ELRRIL*MIAAGGVPRFHVNGEAA*APLPRRLHPQVRLASQLSEWRDPARVAEIREAVQDLEGNAERDGRWGRGGRPTLRGGWQTRSSVSSKRRRGTRLRSAESERLPKLNVRSWRLRANVQLNSDVGVAVESLEQLVLAPPSGVQREDSLILE*GMLRSEQRKKNARNL 593
P K KRHQ GRA HV ELRRIL M+AAGG R VNGEAA APLP+RLHPQVRLASQL EWRDPARVAEIREA+QD GNAERDGRWGRGG+P+ RGGWQTRS+VSSKRRRG RSAESERLPKLNVRSW L A+ Q NS V VAVESLEQL LAP SGVQREDSLILE G+LRSE RK L
Sbjct: 42 PLKEKRHQGGRATHVIAPHELRRILLMVAAGGGLRLLVNGEAAWAPLPQRLHPQVRLASQLCEWRDPARVAEIREAIQDPAGNAERDGRWGRGGKPSFRGGWQTRSTVSSKRRRGNMRRSAESERLPKLNVRSWSLEASGQSNSGVEVAVESLEQLALAPSSGVQREDSLILELGILRSEPRKNTQETL 230
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Match: A0A6H5KF76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF76_9PHAE) HSP 1 Score: 139 bits (350), Expect = 3.030e-36 Identity = 76/108 (70.37%), Postives = 83/108 (76.85%), Query Frame = -2
Query: 228 MIAAGGVPRFHVNGEAA*APLPRRLHPQVRLASQLSEWRDPARVAEIREAVQDLEGNAERDGRWGRGGRPTLRGGWQTRSSVSSKR--------RRGTRLRSAESERL 527
M+AAGG R VNGEAA AP P+RLHPQVRLASQLSEWRDPARV EIREAVQD GNAERDGRWGRGG P+LRG WQTRS+VSSK+ RR + AE E+L
Sbjct: 1 MVAAGGGLRLLVNGEAAWAPPPQRLHPQVRLASQLSEWRDPARVVEIREAVQDPVGNAERDGRWGRGGEPSLRGEWQTRSTVSSKKEARQQAKVRREREIAEAEREKL 108
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Match: A0A6H5JUC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC7_9PHAE) HSP 1 Score: 113 bits (282), Expect = 3.780e-25 Identity = 64/100 (64.00%), Postives = 65/100 (65.00%), Query Frame = -1
Query: 4 MADEEFXXXXXXXXXXXXXXXXXXXXXXXXXXLASEGKRTVEFRRRSCGGKLGTAGSRSTKRSATRRQSDPGVRNAQIGTEKKKRKKPCRREESGWFTNN 303
MADEE+ L S GKRTVEFRRRSCGGKLGTAGSRS KRSA RRQSDPGVRN QIG EKK RKKPCRR E GWFTNN
Sbjct: 1 MADEEYSEQQKEARQHAKVRREREIAEAEREKLESGGKRTVEFRRRSCGGKLGTAGSRSVKRSAARRQSDPGVRNTQIGAEKKTRKKPCRRAECGWFTNN 100
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Match: A0A6H5JM20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM20_9PHAE) HSP 1 Score: 113 bits (282), Expect = 3.810e-25 Identity = 64/100 (64.00%), Postives = 65/100 (65.00%), Query Frame = -1
Query: 4 MADEEFXXXXXXXXXXXXXXXXXXXXXXXXXXLASEGKRTVEFRRRSCGGKLGTAGSRSTKRSATRRQSDPGVRNAQIGTEKKKRKKPCRREESGWFTNN 303
MADEE+ L S GKRTVEFRRRSCGGKLGTAGSRS KRSA RRQSDPGVRN QIG EKK RKKPCRR E GWFTNN
Sbjct: 1 MADEEYSEQKKEARQHAMVRREREIAEAERDKLESGGKRTVEFRRRSCGGKLGTAGSRSVKRSAARRQSDPGVRNTQIGAEKKTRKKPCRRAECGWFTNN 100
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Match: A0A6H5K178_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K178_9PHAE) HSP 1 Score: 110 bits (274), Expect = 4.060e-24 Identity = 63/100 (63.00%), Postives = 64/100 (64.00%), Query Frame = -1
Query: 4 MADEEFXXXXXXXXXXXXXXXXXXXXXXXXXXLASEGKRTVEFRRRSCGGKLGTAGSRSTKRSATRRQSDPGVRNAQIGTEKKKRKKPCRREESGWFTNN 303
MADEE+ L S GKRTVEFRRRSCGGKL TAGSRS KRSA RRQSDPGVRN QIG EKK RKKPCRR E GWFTNN
Sbjct: 1 MADEEYSEQQKEARQQAKVRREREIAEAEREKLESGGKRTVEFRRRSCGGKLRTAGSRSVKRSAARRQSDPGVRNTQIGAEKKTRKKPCRRAECGWFTNN 100
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Match: A0A6H5L193_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L193_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 4.940e-19 Identity = 52/68 (76.47%), Postives = 55/68 (80.88%), Query Frame = -1
Query: 4 LASEGKRTVEFRRRSCGGKLGTAGSRSTKRSATRRQSDPGVRNAQIGTEKKKRKKPCRREESGWFTNN 207
L S GKRTVEF+RRS GKLGTAGSRS K SA RRQSDPGV N +IG E+K RKKPCRR E GWFTNN
Sbjct: 33 LESGGKRTVEFQRRSWCGKLGTAGSRSVKWSAARRQSDPGVGNTEIGAERKSRKKPCRRAECGWFTNN 100
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Match: A0A6H5KED7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED7_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 4.870e-9 Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = -1
Query: 289 RDPGSRTGSGRKRRKRRTLGQRRQADFEGRMADEE 393
RDPGSRTGSGRKRRKRRTLGQRR A FEGRM+DEE
Sbjct: 4 RDPGSRTGSGRKRRKRRTLGQRRHAVFEGRMSDEE 38
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Match: A0A6H5L8Z0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Z0_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 2.200e-6 Identity = 67/184 (36.41%), Postives = 85/184 (46.20%), Query Frame = -1
Query: 10 TPSNPVNDSSGGGSTV--PRQRGGGLSTASPEATPASTPGVTTKRVA-GSGARGRDPGSRTGSGRKRRKRRTLGQRRQA--DFEGRMADEEFXXXXXXXXXXXXXXXXXXXXXXXXXXLASEGKRTVEFRRRSCGGKLGTAGSRSTKRSATRRQSDPGVRNAQIGTEKKKRKKPCRREESGWFT 546
TP PV D+SGG T PR R G + E TP TKR A SGAR R G ++ SGRKRRKR ++G + E ++ +E++ S G V+ RRRS GG AG + KR+A RR S P V + + T KK+RK C R E GW T
Sbjct: 59 TPRTPVVDNSGGDITSERPRIRSGREGNLTTEVR---TPTAATKRDARDSGARVRRTGGKSRSGRKRRKRPSVGVTGGGLPNLESKLEEEDYYRQQGEARREASARKARAIAEDERQKAESAGNHPVDPRRRSHGGNPRQAGYQPGKRNAGRRLSAPAVLSVRQPTSKKRRK-ACERMECGWVT 238
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 2.490e-6 Identity = 67/184 (36.41%), Postives = 85/184 (46.20%), Query Frame = -1
Query: 10 TPSNPVNDSSGGGSTV--PRQRGGGLSTASPEATPASTPGVTTKRVA-GSGARGRDPGSRTGSGRKRRKRRTLGQRRQA--DFEGRMADEEFXXXXXXXXXXXXXXXXXXXXXXXXXXLASEGKRTVEFRRRSCGGKLGTAGSRSTKRSATRRQSDPGVRNAQIGTEKKKRKKPCRREESGWFT 546
TP PV D+SGG T PR R G + E TP TKR A SGAR R G ++ SGRKRRKR ++G + E ++ +E++ S G V+ RRRS GG AG + KR+A RR S P V + + T KK+RK C R E GW T
Sbjct: 59 TPRTPVVDNSGGDITSERPRIRSGREGNLTTEVR---TPTAATKRDARDSGARVRRTGGKSRSGRKRRKRPSVGVTGGGLPNLESKLEEEDYYRQQGEARREASARKARAIAEDERQKAESAGNHPVDPRRRSHGGNPRQAGYQPGKRNAGRRLSAPAVLSVRQPTSKKRRK-ACERMECGWVT 238 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16155.1 >prot_E-siliculosus-1a_M_contig8.16155.1 ID=prot_E-siliculosus-1a_M_contig8.16155.1|Name=mRNA_E-siliculosus-1a_M_contig8.16155.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=225bp RVVCEPTGLLTPTRFLAFFFLCSDLSIPYSRIRLSSRCTPLGGARTSCSKback to top mRNA from alignment at E-siliculosus-1a_M_contig8:1445569..1446243+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16155.1 ID=mRNA_E-siliculosus-1a_M_contig8.16155.1|Name=mRNA_E-siliculosus-1a_M_contig8.16155.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=675bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1445569..1446243+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1445569..1446243+ >mRNA_E-siliculosus-1a_M_contig8.16155.1 ID=mRNA_E-siliculosus-1a_M_contig8.16155.1|Name=mRNA_E-siliculosus-1a_M_contig8.16155.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1350bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1445569..1446243+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |