prot_E-siliculosus-1a_M_contig78.15925.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig78.15925.1
Unique Name	prot_E-siliculosus-1a_M_contig78.15925.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	411

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig78.15925.1 vs. uniprot
Match: A0A6H5KJM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM5_9PHAE)

HSP 1 Score: 739 bits (1907), Expect = 5.000e-268
Identity = 380/410 (92.68%), Postives = 392/410 (95.61%), Query Frame = 0

Query:    1 MSAELSRPDFDADGTAATSTASEDQRNYRAAYLKKQARRGMKHAAAFLSLGLFLEIGATFWTLAQAIASGVFDEADCGVRALSLYHNDRLPSNCEQLDSSVVWFDEDRTVSTFTSCSGLEDPAIDQLCDCAKYDKVSTGCTWTSASSTRDEIEGLCVAVPVIALTADLQEEYGTTYDYLLDSSELEYQDDCRPLSPEGFGDITIALLVVSLSLELVEAYVGYKRWRDPLSVRGLVVVASVLEGVGLFSIWCLLRFLPGGILETEVSENQYKFLNIMLYGVLVVTFGGTLAEIVYYFSAPGRFRYLSVFGNSLTWLASALTEVLVTAYLVWRLQWWENAEDENADEETWPVLVAAVVGLVVLEVAALLVLWIARVLISRAKSALLTAKHLSLKEPCSGAANSSGAASHKEI 410
            MSAE S+PDFDADGTAAT T SE +RN+RAA LKKQA RGMKHAAAFLSLGLFLEIGATFWTLAQAIASGVFDEADCGVRALSLYHNDRLPSNCEQLDSSVVWFDEDRTVSTFTSCSGLEDP IDQLCDCA+YD+VSTGCTWTSASSTRDEIEGLCVAVPVIALT+DLQEEYGTTYD+LLDSSELEYQDDCRPLSPEGFGDITIALLVVSLSLELVEAYVGYKRWR+PLSVRGLVVVASVLEGVGLFSIWCLLRFLPGGILETEVSENQYKFLNIMLYGVLVVTFGGTLAEIV+YFSAPGRFRYL V GNSLTWLASALTEV+VTAYLVWRLQWWENA DE ADEETWPVLVAAV+GLVVLEVAALLVLWIARVLI+RA SALLTAK LSL EPC G AN  GAASHKEI
Sbjct:    1 MSAESSQPDFDADGTAATGTVSEGKRNHRAACLKKQAIRGMKHAAAFLSLGLFLEIGATFWTLAQAIASGVFDEADCGVRALSLYHNDRLPSNCEQLDSSVVWFDEDRTVSTFTSCSGLEDPPIDQLCDCARYDRVSTGCTWTSASSTRDEIEGLCVAVPVIALTSDLQEEYGTTYDWLLDSSELEYQDDCRPLSPEGFGDITIALLVVSLSLELVEAYVGYKRWRNPLSVRGLVVVASVLEGVGLFSIWCLLRFLPGGILETEVSENQYKFLNIMLYGVLVVTFGGTLAEIVFYFSAPGRFRYLGVLGNSLTWLASALTEVVVTAYLVWRLQWWENA-DETADEETWPVLVAAVIGLVVLEVAALLVLWIARVLIARATSALLTAKDLSLGEPCRGMANGGGAASHKEI 409

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig78.15925.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig78.15925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KJM5_9PHAE	5.000e-268	92.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 223..233
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 256..274
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..43
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 350..372
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 275..296
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..64
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 331..349
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 297..307
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 65..201
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 202..222
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 234..255
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 373..410
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 308..330
None	No IPR available	TMHMM	TMhelix		coord: 311..330
None	No IPR available	TMHMM	TMhelix		coord: 199..221
None	No IPR available	TMHMM	TMhelix		coord: 234..256
None	No IPR available	TMHMM	TMhelix		coord: 350..372
None	No IPR available	TMHMM	TMhelix		coord: 45..67
None	No IPR available	TMHMM	TMhelix		coord: 276..298

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig78	contig	E-siliculosus-1a_M_contig78:570731..573715 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig78.15925.1	mRNA_E-siliculosus-1a_M_contig78.15925.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig78 569254..573782 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig78.15925.1 ID=prot_E-siliculosus-1a_M_contig78.15925.1|Name=mRNA_E-siliculosus-1a_M_contig78.15925.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=411bp
MSAELSRPDFDADGTAATSTASEDQRNYRAAYLKKQARRGMKHAAAFLSL
GLFLEIGATFWTLAQAIASGVFDEADCGVRALSLYHNDRLPSNCEQLDSS
VVWFDEDRTVSTFTSCSGLEDPAIDQLCDCAKYDKVSTGCTWTSASSTRD
EIEGLCVAVPVIALTADLQEEYGTTYDYLLDSSELEYQDDCRPLSPEGFG
DITIALLVVSLSLELVEAYVGYKRWRDPLSVRGLVVVASVLEGVGLFSIW
CLLRFLPGGILETEVSENQYKFLNIMLYGVLVVTFGGTLAEIVYYFSAPG
RFRYLSVFGNSLTWLASALTEVLVTAYLVWRLQWWENAEDENADEETWPV
LVAAVVGLVVLEVAALLVLWIARVLISRAKSALLTAKHLSLKEPCSGAAN
SSGAASHKEI*