prot_E-siliculosus-1a_M_contig77.15849.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig77.15849.1
Unique Name	prot_E-siliculosus-1a_M_contig77.15849.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	394

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig77.15849.1 vs. uniprot
Match: D7G260_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G260_ECTSI)

HSP 1 Score: 669 bits (1725), Expect = 2.930e-241
Identity = 348/369 (94.31%), Postives = 360/369 (97.56%), Query Frame = 0

Query:   25 MVMSKWTRQPTAFGRAAMATFVAAAGTARLAMGATLDISSPASTSSYHAGDAVPVQWIYEGTGENFAIHLLKGNEEVADLCFAEENGVCFDLTQDQTVILPDTDLESGSDYTVRVRDQSSDLEDTSETFTIIGASTSNVEITSPDGYTTLNAGGDVSVSWLYVGENTEFDIYLRQDGERVSSNLCADEEGGSCTATIPVASATITLPEEIENGADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGFRTRNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQQPSGGVSGWLGRFMPQRLKSKSGGVGSDSGDSGAITPNEDRGRPGNHVV 393
            MV++K TR PTAFGRAA A FVA A TAR+A+GATLDISSPASTSSYHAGDAVPV+WIYEGTGENFAIHLLKG+EEVADLCFAEENGVCFDLTQ+QTVILPDTDLESGSDYTVRVRDQSSDLEDTSETFTIIG STSNVEITSPDGYTTLNAGGD+SVSWLYVGENTEFDIYLRQDGERVS+NLCAD+EGGSCTATIPVASATITLPEEIENGADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGFRT+NKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQ  SGGVSGWLGRFMPQRLKSKSGGVGSDSGDSGAITPNEDRGRPGNH+V
Sbjct:    1 MVITKRTRPPTAFGRAAAAIFVAGASTARVALGATLDISSPASTSSYHAGDAVPVEWIYEGTGENFAIHLLKGDEEVADLCFAEENGVCFDLTQEQTVILPDTDLESGSDYTVRVRDQSSDLEDTSETFTIIGTSTSNVEITSPDGYTTLNAGGDLSVSWLYVGENTEFDIYLRQDGERVSNNLCADQEGGSCTATIPVASATITLPEEIENGADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGFRTKNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQT-SGGVSGWLGRFMPQRLKSKSGGVGSDSGDSGAITPNEDRGRPGNHIV 368

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BLAST of mRNA_E-siliculosus-1a_M_contig77.15849.1 vs. uniprot
Match: A0A6H5J6J4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6J4_9PHAE)

HSP 1 Score: 573 bits (1477), Expect = 2.450e-203
Identity = 302/319 (94.67%), Postives = 309/319 (96.87%), Query Frame = 0

Query:   27 MSKWTRQPTAFGRAAMATFVAAAGTARLAMGATLDISSPASTSSYHAGDAVPVQWIYEGTGENFAIHLLKGNEEVADLCFAEENGVCFDLTQDQTVILPDTDLESGSDYTVRVRDQSSDLEDTSETFTIIGASTSNVEITSPDGYTTLNAGGDVSVSWLYVGENTEFDIYLRQDGERVSSNLCADEEGGSCTATIPVASATITLPEEIENGADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGFRTRNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQQ 345
            M+K T  PTAFGRAA+ATFVAAAGTARLA+GATLDISSPASTSSYHAGDAVPVQWIYEGTGENFAIHLLKG+EEVADLC AEENGVCFDLTQDQTVILPDT LESGSDYTVRVRDQSSDLEDTSETFTIIG STSNVEITSPDGYTTLNAGG VSVSWLYVGEN EFDIYLRQ+GERVSSNLCAD+EGGSCTATIPVASATITLPEEIEN ADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAG RTRNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQ+
Sbjct:    1 MTKRTPPPTAFGRAAVATFVAAAGTARLALGATLDISSPASTSSYHAGDAVPVQWIYEGTGENFAIHLLKGDEEVADLCSAEENGVCFDLTQDQTVILPDTGLESGSDYTVRVRDQSSDLEDTSETFTIIGTSTSNVEITSPDGYTTLNAGGVVSVSWLYVGENMEFDIYLRQNGERVSSNLCADQEGGSCTATIPVASATITLPEEIENAADYRLLVVDKVNDDAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAGLRTRNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQR 319

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig77.15849.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig77.15849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G260_ECTSI	2.930e-241	94.31	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5J6J4_9PHAE	2.450e-203	94.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR40633:SF1		coord: 157..258 coord: 40..161
None	No IPR available	PANTHER	PTHR40633	FAMILY NOT NAMED	coord: 157..258 coord: 40..161
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..279
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 302..393
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 280..301
None	No IPR available	TMHMM	TMhelix		coord: 280..301

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig77	contig	E-siliculosus-1a_M_contig77:626822..633413 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig77.15849.1	mRNA_E-siliculosus-1a_M_contig77.15849.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig77 626822..633413 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig77.15849.1 ID=prot_E-siliculosus-1a_M_contig77.15849.1|Name=mRNA_E-siliculosus-1a_M_contig77.15849.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=394bp
TSDYIRARVTHAPVCPESQLPKPRMVMSKWTRQPTAFGRAAMATFVAAAG
TARLAMGATLDISSPASTSSYHAGDAVPVQWIYEGTGENFAIHLLKGNEE
VADLCFAEENGVCFDLTQDQTVILPDTDLESGSDYTVRVRDQSSDLEDTS
ETFTIIGASTSNVEITSPDGYTTLNAGGDVSVSWLYVGENTEFDIYLRQD
GERVSSNLCADEEGGSCTATIPVASATITLPEEIENGADYRLLVVDKVND
DAWGLSVELPVGVAAASVDTGSDSSAATKLALVIGLSAGGVCLLAVLLAG
FRTRNKNRRREEKLATLDMLNKRRPAPSVSLAVEGMAEPDSPDQQPSGGV
SGWLGRFMPQRLKSKSGGVGSDSGDSGAITPNEDRGRPGNHVV*