prot_E-siliculosus-1a_M_contig77.15843.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig77.15843.1
Unique Nameprot_E-siliculosus-1a_M_contig77.15843.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length306
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig77.15843.1 vs. uniprot
Match: D7FWW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 5.120e-18
Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 0 
Query:    1 MASVSSSVLDDNDTKHTGRLRRELIYYVYHVGLPVAAVVAEIVVVHLIIETASTLTVVDDWGTDTREAMIKLEQ 74
            MASVSSS+L DN ++H  RL  +LIY     G  VAAVVAEIVV++LIIE ASTLT VDDWG DTREAMIKLEQ
Sbjct:    1 MASVSSSILYDNTSEHKRRLAGKLIY---STGSLVAAVVAEIVVLNLIIEVASTLTAVDDWGADTREAMIKLEQ 71
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BLAST of mRNA_E-siliculosus-1a_M_contig77.15843.1 vs. uniprot
Match: D8LT13_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT13_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 2.480e-12
Identity = 60/147 (40.82%), Postives = 79/147 (53.74%), Query Frame = 0 
Query:   72 LEQAFSERKSRISQAVLFKSLISALLIVVMAFITGVDARFVGGGIVGGSINQLIDVVHSLYRMDFSRQTPGTWRHAWLRGREIDESWEAQLEKKHMEIMAKIDEDLAKLTKDIMELDNRLRATGNTSEVQGISMETLALCK-KCKDN 217
            L +AFS  KS+IS+ V+  SLI AL++ V+A ITG+ ARFV GGIVG  INQLI VVH+L RMDFSRQ  G      +   E++E  EA                 A     +++      ATGN +  + I  E L L   +C D+
Sbjct:  291 LLEAFSRTKSQISRVVILASLIMALVLTVIACITGITARFVAGGIVG-PINQLIYVVHALNRMDFSRQVAGPHMVNRISCPEVEELMEA-----------------APAMNTVVKFATTTLATGNIAAAKVIYREALTLFTIRCNDS 419
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig77.15843.1 vs. uniprot
Match: D7FWV2_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV2_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 3.960e-9
Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 0 
Query:   72 LEQAFSERKSRISQAVLFKSLISALLIVVMAFITGVDARFVGGGIVGGSINQLIDVVHSLYRMDFSRQ 139
            L +AFSE KS+IS+  LF SLI AL++VV+A I GV AR V  GIV   +NQL D+VHSL RMDFSRQ
Sbjct:  414 LLEAFSETKSQISRVELFASLIMALVLVVVACIMGVTARAVACGIVI-PVNQLTDIVHSLNRMDFSRQ 480
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BLAST of mRNA_E-siliculosus-1a_M_contig77.15843.1 vs. uniprot
Match: A0A6H5K0U1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U1_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.330e-7
Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 0 
Query:   83 ISQAVLFKSLISALLIVVMAFITGVDARFVGGGIVGGSINQLIDVVHSLYRMDFSRQTPG 142
            I + V+  SLI AL++ V+A ITGV ARFV GGIVG  INQLI VVH+L R+DFSRQ  G
Sbjct:  247 IPRVVILASLIMALVLTVIACITGVTARFVAGGIVG-PINQLIYVVHALNRLDFSRQVAG 305
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig77.15843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FWW2_ECTSI5.120e-1870.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LT13_ECTSI2.480e-1240.82VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FWV2_ECTSI3.960e-963.24VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K0U1_9PHAE1.330e-763.33Reverse transcriptase domain-containing protein (F... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..197
NoneNo IPR availableCOILSCoilCoilcoord: 270..294
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..305
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..132
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 87..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig77contigE-siliculosus-1a_M_contig77:560890..565685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig77.15843.1mRNA_E-siliculosus-1a_M_contig77.15843.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig77 560776..566221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig77.15843.1 ID=prot_E-siliculosus-1a_M_contig77.15843.1|Name=mRNA_E-siliculosus-1a_M_contig77.15843.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=306bp
MASVSSSVLDDNDTKHTGRLRRELIYYVYHVGLPVAAVVAEIVVVHLIIE
TASTLTVVDDWGTDTREAMIKLEQAFSERKSRISQAVLFKSLISALLIVV
MAFITGVDARFVGGGIVGGSINQLIDVVHSLYRMDFSRQTPGTWRHAWLR
GREIDESWEAQLEKKHMEIMAKIDEDLAKLTKDIMELDNRLRATGNTSEV
QGISMETLALCKKCKDNNFADFDTIHRFLTAYADDLAGAATNQQPNAAEA
QRWNRQATKSQKKRLRRRLRRRLRRRLRRRRNRLRRRRNRHRLLLRVRPR
RRCHH*
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