prot_E-siliculosus-1a_M_contig75.15657.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15657.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15657.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length644
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig75.15657.1 vs. uniprot
Match: D7FWN4_ECTSI (BHLH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN4_ECTSI)

HSP 1 Score: 694 bits (1790), Expect = 1.910e-244
Identity = 472/608 (77.63%), Postives = 480/608 (78.95%), Query Frame = 0
Query:   39 MEFGGAGGPSEQHGCLNFFDGGATAAEISSAFQKMPRLDAAAAQLGAAKAKKNGKGRVVEAPGNQQXXXXXXXXXXXXXXXXXXXXXX---PHHQAGSDRNTSSMLAMAQKSTRTAKNGREQQRAQKISDVIDQLKATLDKANVSDGSSSKLHVLVSCESYLRSLKDKIQCYEMEIKLREAARGHRQQAPADSDTARASGSSVDHDVKNWAAKGNAAVVGPAREGRPTKPDTGGSSPSDETDRMDTVEDFCSGSGSGSGGDARFSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENSLGDGGSGXVGXXXXSSSTXXDXDAXSSXXXXXXTXXXTTDSGSQDFTXXXXXXXXXXXXXFSXYTGSLXXXXXXXXXXXXXXESEEGTAGARMRVVNYFDIFRLSNVPMAIADKAGALVDVNDAMRGFGRINQETVSTLTVRSLVAPESAQALQDAMSGMLLAAAASSPSESPVPSPQMGAQPFLANAGIGNRPTLLTVSLVFDEGGEASAFHVALIPRTTGAGDGGGSSGSCTNGGGDTDGLSACRERHSTEYDADAPEFSVQAAKGEGGGGCSAGKRGRARSWDAGGQSKSQKRRSGQAL 643
            MEFGGA G SE HGCLNF D  ATAAEISSA QKMPRLDAA AQLGAAKAKKNGKGRV EAPGNQQ XXXXXXXXXX              P HQAGSDRNTSSMLAMAQKSTRTAKNGREQQRAQKISDVIDQLKATLDKANVSDGSSSKLHVLVSCESYLRSL+DKIQCYEME KLR+AARGHRQQAPADSDTARASGSSVD+DVK+WAAKGNA VVGPAREG                                                                                SLGDGG  X  XXXXSSSTXXDXDAXSS X X  T X TTDSGSQDFTXXXXXXXXXXXXXFSXYTGSLXXXXXXXXXXXXXXESEEGTAGARMRVVNYFDIFRLSNVPMAIADKAGALVDVNDAMRGFGRINQETVSTLTVRSLVAPESAQALQDAMSGMLLAAAASSPSESPVPSPQ+GAQPFLANAGIGNRPTLLTVSLVFDEGGEASAFHVALIPRTTG GDG       T+GGGDTDGL+A RERHSTEY+ADAPEFSVQA KGEGGGGCSA KRGRARSWDAGGQSKSQKRRSGQAL
Sbjct:    1 MEFGGAAGASEPHGCLNFLDCEATAAEISSALQKMPRLDAATAQLGAAKAKKNGKGRVAEAPGNQQAXXXXXXXXXXAKTAVAAGHVLQQRPQHQAGSDRNTSSMLAMAQKSTRTAKNGREQQRAQKISDVIDQLKATLDKANVSDGSSSKLHVLVSCESYLRSLRDKIQCYEMETKLRQAARGHRQQAPADSDTARASGSSVDNDVKSWAAKGNAEVVGPAREG--------------------------------------------------------------------------------SLGDGGXXXXXXXXXSSSTXXDXDAXSSDXGXGSTSXGTTDSGSQDFTXXXXXXXXXXXXXFSXYTGSLXXXXXXXXXXXXXXESEEGTAGARMRVVNYFDIFRLSNVPMAIADKAGALVDVNDAMRGFGRINQETVSTLTVRSLVAPESAQALQDAMSGMLLAAAASSPSESPVPSPQIGAQPFLANAGIGNRPTLLTVSLVFDEGGEASAFHVALIPRTTGTGDGXXXXXXXTDGGGDTDGLAASRERHSTEYNADAPEFSVQAEKGEGGGGCSARKRGRARSWDAGGQSKSQKRRSGQAL 528          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15657.1 vs. uniprot
Match: A0A6V1XER4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XER4_HETAK)

HSP 1 Score: 58.5 bits (140), Expect = 2.030e-5
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 0
Query:  149 RTAKNGREQQRAQKISDVIDQLKATLDKANVSDGSSSKLHVLVSCESYLRSLKDKIQCYEMEIKLREA 216
            R A+N REQ+RA +I+ VI+++K  L++ +    SSSK H+L +CE  +RSL+ + Q YEME +LR+A
Sbjct:  138 RLARNEREQKRAHRIAQVIEEIKEMLERGSFPLKSSSKYHILSACEEMIRSLEMRTQSYEMEKQLRDA 205          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15657.1 vs. uniprot
Match: A0A7R9U164_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U164_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.300e-5
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 0
Query:  149 RTAKNGREQQRAQKISDVIDQLKATLDKANVSDGSSSKLHVLVSCESYLRSLKDKIQCYEMEIKLREAARGHRQ 222
            R A+N REQ+RA +ISDVI+QLK TL  A     S+SK HVL + ++Y++SL+ + +C  ME K+ E  +G +Q
Sbjct:  147 RIARNYREQKRAHRISDVIEQLKKTLAAAGFPTRSTSKYHVLKAAQAYIQSLQHRERCAMMEKKVLEQLQGQKQ 220          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15657.1 vs. uniprot
Match: A0A7S1TUJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUJ5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 7.780e-5
Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = 0
Query:  149 RTAKNGREQQRAQKISDVIDQLKATLDKANVSDGSSSKLHVLVSCESYLRSLKDKIQCYEMEIKL 213
            R  +N REQ+RA +ISDVI+QLK +L  A    GS SK HVL +  +Y+RSL+ K QC++ E  L
Sbjct:  213 RMQRNFREQRRAHRISDVIEQLKTSLADAGFPTGSQSKYHVLRAATAYIRSLQHKEQCFKYERDL 277          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FWN4_ECTSI1.910e-24477.63BHLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6V1XER4_HETAK2.030e-547.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9U164_9STRA2.300e-547.30Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1TUJ5_9STRA7.780e-550.77Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..217
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 140..227
e-value: 2.4E-5
score: 26.2
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 146..216
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 147..200
score: 9.077

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:571127..574528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15657.1mRNA_E-siliculosus-1a_M_contig75.15657.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 570537..574722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15657.1 ID=prot_E-siliculosus-1a_M_contig75.15657.1|Name=mRNA_E-siliculosus-1a_M_contig75.15657.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=644bp
MRQVESSLGGSVSKLQHYSTLLCEDSHSKQTEENERKDMEFGGAGGPSEQ
HGCLNFFDGGATAAEISSAFQKMPRLDAAAAQLGAAKAKKNGKGRVVEAP
GNQQAAAAAVVAPAAAKTAVAVLQQRPHHQAGSDRNTSSMLAMAQKSTRT
AKNGREQQRAQKISDVIDQLKATLDKANVSDGSSSKLHVLVSCESYLRSL
KDKIQCYEMEIKLREAARGHRQQAPADSDTARASGSSVDHDVKNWAAKGN
AAVVGPAREGRPTKPDTGGSSPSDETDRMDTVEDFCSGSGSGSGGDARFS
NNSSASRGSTSTSTSSGGGRRSKKQRLYSASSSSSDDDENSLGDGGSGGV
GGVGGSSSTGSDGDAGSSDSGGGSTSAGTTDSGSQDFTTDTTSRGFTTDS
SFSGYTGSLGSGGDAGSADGGSDESEEGTAGARMRVVNYFDIFRLSNVPM
AIADKAGALVDVNDAMRGFGRINQETVSTLTVRSLVAPESAQALQDAMSG
MLLAAAASSPSESPVPSPQMGAQPFLANAGIGNRPTLLTVSLVFDEGGEA
SAFHVALIPRTTGAGDGGGSSGSCTNGGGDTDGLSACRERHSTEYDADAP
EFSVQAAKGEGGGGCSAGKRGRARSWDAGGQSKSQKRRSGQAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf