prot_E-siliculosus-1a_M_contig749.15593.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig749.15593.1
Unique Nameprot_E-siliculosus-1a_M_contig749.15593.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length83
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: D1J715_ECTSI (50S ribosomal protein L1, chloroplastic n=3 Tax=Ectocarpales TaxID=2877 RepID=D1J715_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 3.930e-44
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            MKKLNKRTKENRQ VEKRLYN+TEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI
Sbjct:    1 MKKLNKRTKENRQNVEKRLYNRTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83          
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: A0A6B7EV19_9PHAE (Ribosomal protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV19_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 1.010e-41
Identity = 76/83 (91.57%), Postives = 81/83 (97.59%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            M+KLNKRT+ENRQKVE+RLYNQTEAISLLKETANANFIESVEAH+SL+IDPKYSDQQLRSTLILPKGTG TKRIAVLMPLE I
Sbjct:    1 MRKLNKRTRENRQKVEERLYNQTEAISLLKETANANFIESVEAHVSLSIDPKYSDQQLRSTLILPKGTGTTKRIAVLMPLEAI 83          
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: A0A0R6MAX7_UNDPI (50S ribosomal protein L1, chloroplastic n=33 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6MAX7_UNDPI)

HSP 1 Score: 140 bits (353), Expect = 4.750e-40
Identity = 74/83 (89.16%), Postives = 79/83 (95.18%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            M+KLNKRTKENRQK+EK LYNQ +AI LLKETANA FIESVEAHISL+IDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLE+I
Sbjct:    1 MRKLNKRTKENRQKIEKHLYNQDDAIRLLKETANAKFIESVEAHISLSIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLESI 83          
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: A0A8F0F916_9PHAE (Ribosomal protein n=1 Tax=Postelsia palmaeformis TaxID=105414 RepID=A0A8F0F916_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 3.830e-39
Identity = 72/83 (86.75%), Postives = 79/83 (95.18%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            M+KLNKRTKENRQKVEKRLY+Q +AI +LKETANA F+ESVEAHISL+IDPKYSDQQLRSTLILPKGTG TKRIAVLMPLE+I
Sbjct:    1 MRKLNKRTKENRQKVEKRLYSQNDAIRILKETANAKFVESVEAHISLSIDPKYSDQQLRSTLILPKGTGNTKRIAVLMPLESI 83          
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: A0A8F0JZW3_9PHAE (Ribosomal protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZW3_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.090e-38
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            M+KLNKRTK+N QKVEKRLY Q EAI LLKETANANF+ESVEAHISL+IDPKYSDQQLRSTLILPKGTGK KRIAVLMPLE+I
Sbjct:    1 MRKLNKRTKDNIQKVEKRLYQQEEAIRLLKETANANFVESVEAHISLSIDPKYSDQQLRSTLILPKGTGKKKRIAVLMPLESI 83          
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: A0A8F0F9R0_9PHAE (Ribosomal protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9R0_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.090e-38
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            MKKLNKR + N QK+EK LYN+++AI LLKETANANF+ESVEAHISL+IDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI
Sbjct:    1 MKKLNKRMRRNNQKIEKSLYNESDAIRLLKETANANFVESVEAHISLSIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83          
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: A0A2R4QQ22_9PHAE (Ribosomal protein n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ22_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.520e-35
Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            MKKL KRTK+N+QK+EKRLYNQ EAI+L+KETANA FIES+E HISL+IDPKYSDQQLRSTLILPKGTGKTKRIA+L+  E +
Sbjct:    1 MKKLTKRTKDNKQKIEKRLYNQNEAIALIKETANAQFIESIEVHISLSIDPKYSDQQLRSTLILPKGTGKTKRIALLVAPEAL 83          
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: A0A8F0F7E6_9PHAE (Ribosomal protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7E6_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.210e-35
Identity = 66/83 (79.52%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            MKKLNKRT+ NR+K+E RLY + EAI LLK+TANA F+ES+EAHISL+IDPKYSDQQLRSTLILPKGTGK KRIAVLMPL+ I
Sbjct:    1 MKKLNKRTRNNREKIENRLYTKEEAIMLLKDTANARFVESIEAHISLSIDPKYSDQQLRSTLILPKGTGKIKRIAVLMPLDGI 83          
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: A0A2I4Q2L5_9PHAE (50S ribosomal protein L1, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2L5_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 9.080e-35
Identity = 65/83 (78.31%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            MKKL+KR K NR+K+E RLY++ EAIS+LKET NA FIES+E HI+LAIDPKYSDQQLRSTLILPKGTGKTKRIA+LMP E+I
Sbjct:    1 MKKLHKRAKANREKIENRLYDKEEAISILKETTNAKFIESIEVHIALAIDPKYSDQQLRSTLILPKGTGKTKRIALLMPFESI 83          
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Match: A0A141BSK4_9PHAE (50S ribosomal protein L1, chloroplastic n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSK4_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 5.010e-34
Identity = 64/83 (77.11%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    1 MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAIDPKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI 83
            MKKLNKR + N+QKVEKRLY+Q EAI+L+KETANA F+ES+E H++L+IDPKYSDQQLRSTLILPKGTGKTKRIAVL+  E I
Sbjct:    1 MKKLNKRIQNNKQKVEKRLYHQNEAINLVKETANAKFVESIEVHVALSIDPKYSDQQLRSTLILPKGTGKTKRIAVLISSEAI 83          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig749.15593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J715_ECTSI3.930e-4497.5950S ribosomal protein L1, chloroplastic n=3 Tax=Ec... [more]
A0A6B7EV19_9PHAE1.010e-4191.57Ribosomal protein n=1 Tax=Cladosiphon okamuranus T... [more]
A0A0R6MAX7_UNDPI4.750e-4089.1650S ribosomal protein L1, chloroplastic n=33 Tax=P... [more]
A0A8F0F916_9PHAE3.830e-3986.75Ribosomal protein n=1 Tax=Postelsia palmaeformis T... [more]
A0A8F0JZW3_9PHAE1.090e-3887.95Ribosomal protein n=1 Tax=Desmarestia aculeata Tax... [more]
A0A8F0F9R0_9PHAE1.090e-3885.54Ribosomal protein n=1 Tax=Chorda asiatica TaxID=12... [more]
A0A2R4QQ22_9PHAE1.520e-3579.52Ribosomal protein n=3 Tax=Fucaceae TaxID=3010 RepI... [more]
A0A8F0F7E6_9PHAE3.210e-3579.52Ribosomal protein n=1 Tax=Protohalopteris sp. TaxI... [more]
A0A2I4Q2L5_9PHAE9.080e-3578.3150S ribosomal protein L1, chloroplastic n=1 Tax=Di... [more]
A0A141BSK4_9PHAE5.010e-3477.1150S ribosomal protein L1, chloroplastic n=15 Tax=S... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.190.20coord: 18..82
e-value: 8.7E-26
score: 92.3
NoneNo IPR availablePANTHERPTHR23105:SF115coord: 15..78
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 15..78
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 16..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig749contigE-siliculosus-1a_M_contig749:9941..10189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig749.15593.1mRNA_E-siliculosus-1a_M_contig749.15593.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig749 9941..10189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig749.15593.1 ID=prot_E-siliculosus-1a_M_contig749.15593.1|Name=mRNA_E-siliculosus-1a_M_contig749.15593.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=83bp
MKKLNKRTKENRQKVEKRLYNQTEAISLLKETANANFIESVEAHISLAID
PKYSDQQLRSTLILPKGTGKTKRIAVLMPLETI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023674Ribosomal_L1-like