prot_E-siliculosus-1a_M_contig72.15419.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15419.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15419.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length460
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15419.1 vs. uniprot
Match: A0A6H5KJ58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ58_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 4.310e-74
Identity = 187/268 (69.78%), Postives = 194/268 (72.39%), Query Frame = 0 
Query:    3 RTGGYSSLIDTSSALSQYPSSYRSTIAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKLDNAGVWSEESQGKNGGLNFVSVTG-ANRRSRGRASPPHNLRVIGGTPARRGVRKAKPDNXXXXXXXXXXXXXXXXXXXXXTRVNGNMSDSRGDSSINSGRPQTLARPTSTPRRAAMSPHGAAMDAAIRILEERGARLGIVREEKEGDGAXXXXXXXXXXXYS--SERAREAAYATQIAAPAMTSQEQRRQRTRAWAKS 267
            RT GYSSLI+TSSALSQYPSSYRST A                                         KLDNAGVW EESQGKNG LN VSVT  ANRRSRGRASP HNLRVIGGTPARRGVRKAKPDNXXXXXXXXX   XXX      TRVNG MS S GDS  NSGRP+TL RPTSTPRRAAMSPHG AMDAA+R++EERGARLGIVREEKEGDG XXXXXXXXXXX    SE+AREAAYA QIAAPAMTS EQRRQR +AWA S
Sbjct:  383 RTAGYSSLIETSSALSQYPSSYRSTTA----------------------------------------AKLDNAGVWCEESQGKNGDLNGVSVTTTANRRSRGRASPSHNLRVIGGTPARRGVRKAKPDNXXXXXXXXXRGTXXXG-----TRVNGKMSGSGGDSGSNSGRPRTLVRPTSTPRRAAMSPHGVAMDAALRMVEERGARLGIVREEKEGDGXXXXXXXXXXXXXXNRSEKAREAAYANQIAAPAMTSLEQRRQRAKAWALS 605
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15419.1 vs. uniprot
Match: D7G4N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N6_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 6.110e-39
Identity = 98/122 (80.33%), Postives = 104/122 (85.25%), Query Frame = 0 
Query:  158 MSDSRGDSSINSGRPQTLARPTSTPRRAAMSPHGAAMDAAIRILEERGARLGIVREEKEGDGAXXXXXXXXXXXY--SSERAREAAYATQIAAPAMTSQEQRRQRTRAWAKSRAGGTSHMIR 277
            MS S GDS  NSGRP+TLARPT+TPRRAAMSPHG AMDAAIRI+EERGARLGIVREEKEGDG XXXXXXXXXXX   SSERAREAAYA QIAAPAMTS EQRRQR +AWAKSR    + + R
Sbjct:    1 MSGSDGDSGSNSGRPRTLARPTTTPRRAAMSPHGVAMDAAIRIVEERGARLGIVREEKEGDGXXXXXXXXXXXXXXNSSERAREAAYANQIAAPAMTSLEQRRQRAKAWAKSRRRSAALLCR 122
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ58_9PHAE4.310e-7469.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4N6_ECTSI6.110e-3980.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:719993..723049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15419.1mRNA_E-siliculosus-1a_M_contig72.15419.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 719729..723220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15419.1 ID=prot_E-siliculosus-1a_M_contig72.15419.1|Name=mRNA_E-siliculosus-1a_M_contig72.15419.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=460bp
MRRTGGYSSLIDTSSALSQYPSSYRSTIAGSDTSSALSQYPSSYRSTTAG
SDTSSALSQYPSSYRSTTAVKLDNAGVWSEESQGKNGGLNFVSVTGANRR
SRGRASPPHNLRVIGGTPARRGVRKAKPDNNNSNNNNNSGGGGSSGAGGG
GTRVNGNMSDSRGDSSINSGRPQTLARPTSTPRRAAMSPHGAAMDAAIRI
LEERGARLGIVREEKEGDGAAACAAVAAAAAYSSERAREAAYATQIAAPA
MTSQEQRRQRTRAWAKSRAGGTSHMIRTGAMPNLDKVPPPRGHRGERRSS
GNNRRGSNEDQQHRSSGCSRRKKAHHQPANDGHDISSSEEADIGNARYVS
ATHLRSRRSASSSASRFPPRPQEEVESLANKLSRADDGSGNVPETFRLFC
SGGPDVVDGVDEADLSEGGLLRSLAASRNAFDDDEVSGVGVSRRRCLVCA
SRLLLWRCC*
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