prot_E-siliculosus-1a_F_contig158.3343.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig158.3343.1
Unique Nameprot_E-siliculosus-1a_F_contig158.3343.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length240
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig158.3343.1 vs. uniprot
Match: D7FP35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP35_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 7.710e-101
Identity = 194/238 (81.51%), Postives = 200/238 (84.03%), Query Frame = 0 
Query:    2 FSVLAMVGLARLFAFTARRMALTVAATAHAYLLRMVSGIVASGLRRPFARLQAELTSALPRLWGAVSNLNLRLGRVEELHRCAMNARGAMCRERRRLAETVEWLTETVLNLEATVSETPXXXXXXXXXXXXXXXXXMIIGSGAAQLNHVTTLVNGLLTAAAQARRELDDARQEYPTTPATGGRLRLDPEKPFHPNRAESTDGSDITSEVCRHLHDDGLNHERRGRENCKQSKKVQGGT 239
            FSVLAMVGL RL  FTARRMALTVAATAHAYL RM+SGIVASGLRRPFARLQAELTSA+PRLWGAVS +NLRLGRVEELHRCAMNARGAMCRER RLAETVEWLTETVLNLEATVSET XXXXXXXXXXXXXXXXX IIG GAAQLNHVTTLVNGLLTAAAQ  R      ++  TTPATGGRLRL+PEKPFHP            SEVCR LHD GL  ERRGREN KQSK  QGGT
Sbjct:   69 FSVLAMVGLVRLLTFTARRMALTVAATAHAYLQRMISGIVASGLRRPFARLQAELTSAIPRLWGAVSTINLRLGRVEELHRCAMNARGAMCRERGRLAETVEWLTETVLNLEATVSETRXXXXXXXXXXXXXXXXXXIIGGGAAQLNHVTTLVNGLLTAAAQVNRHF--TYEQTQTTPATGGRLRLNPEKPFHPTAVRRVL---FMSEVCRQLHD-GLKRERRGRENYKQSKNGQGGT 300
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BLAST of mRNA_E-siliculosus-1a_F_contig158.3343.1 vs. uniprot
Match: A0A6H5J6H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H6_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 4.340e-78
Identity = 161/284 (56.69%), Postives = 168/284 (59.15%), Query Frame = 0 
Query:    7 MVGLARLFAFTARRMALTVAATAHAYLLRMVSGIVASGLRRPFARLQAELTSALPRLWGAVSNLNLRLGRVEELHRCAMNARGAMCRERRRLAETVEWLTETVLNLEATVSETPXXXXXXXXXXXXXXXXXMIIGSGAAQLNHVTTLVNGLLT-------------------------------------------AAAQARRELDDARQEY----------PTTPATGGRLRLDPEKPFHPNRAESTDGSDITSEVCRHLHDDGLNHERRGRENCKQSKKVQG 237
            MVGL RLFAFTARRMAL VAAT HAYL R VSGIVAS LRRPFARLQAELTSALPRLWGAVSNLN RLGRV+ELHRCAMNARGAMCR+ R+L ETVEWLTETVLNLEA +SET                   II  GAAQLNHVTTL  G                                              A  Q R E+    + +           TTPA GGRLRLDPEKP HP          I SEVCRHLHDDGL HERRGRENCK SK  QG
Sbjct:    1 MVGLVRLFAFTARRMALIVAATWHAYLQRKVSGIVASALRRPFARLQAELTSALPRLWGAVSNLNPRLGRVKELHRCAMNARGAMCRKARQLDETVEWLTETVLNLEAIISET---------------RRLAIISGGAAQLNHVTTLDGGRARPRCGQALGRVRGKGCGASRRMRNKNRGSVRKNGGRDSGRLRCQATGQCRLEIATTGEPFLQNHFTYEQTQTTPAAGGRLRLDPEKPCHPTVRRVL----IMSEVCRHLHDDGLKHERRGRENCKLSKNGQG 265
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig158.3343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP35_ECTSI7.710e-10181.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6H6_9PHAE4.340e-7856.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..239
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig158contigE-siliculosus-1a_F_contig158:68901..77706 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig158.3343.1mRNA_E-siliculosus-1a_F_contig158.3343.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig158 68901..77733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig158.3343.1 ID=prot_E-siliculosus-1a_F_contig158.3343.1|Name=mRNA_E-siliculosus-1a_F_contig158.3343.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=240bp
MFSVLAMVGLARLFAFTARRMALTVAATAHAYLLRMVSGIVASGLRRPFA
RLQAELTSALPRLWGAVSNLNLRLGRVEELHRCAMNARGAMCRERRRLAE
TVEWLTETVLNLEATVSETPRLVATAEWLATSIVNLQMIIGSGAAQLNHV
TTLVNGLLTAAAQARRELDDARQEYPTTPATGGRLRLDPEKPFHPNRAES
TDGSDITSEVCRHLHDDGLNHERRGRENCKQSKKVQGGT*
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