prot_E-siliculosus-1a_M_contig7.15185.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15185.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15185.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length407
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15185.1 vs. uniprot
Match: A0A6H5JMA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA3_9PHAE)

HSP 1 Score: 510 bits (1314), Expect = 2.990e-178
Identity = 281/348 (80.75%), Postives = 285/348 (81.90%), Query Frame = 0 
Query:    1 MTACVSGCRHPLWGGNGACTTVSGASTCLCDSGYASRDSMGRSSCVPRSVLVTAYATIAVTSLFTSIFLLWHANKFRQLSRLHRSTRSALMRFRVLLCG-----------------------------SFFAVGMACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGAEWPFQAVDTIIVLGAVIT----------------------VGLTGVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQIAGYFVLAGANASSAIAFTYTTTGRATTIIPFSIYVRV 297
            MTACV GCRHPLWGGNGACTTVSG STCLCDSGYASRDSMGRSSCVPRSVLV AYATIAVTSL TSIFLLWHA+KFRQLSRLH+STRSALMRFRVLLCG                             SFFA GMACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLAD+FKVFQALSMGLLVGISVIGSFSF GA+WPFQAVDTIIVLGAV T                      VGLT VVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQI GYFVLAGANASSAIAFTYT TGRAT IIPFS YVRV
Sbjct:    1 MTACVRGCRHPLWGGNGACTTVSGTSTCLCDSGYASRDSMGRSSCVPRSVLVMAYATIAVTSLITSIFLLWHASKFRQLSRLHQSTRSALMRFRVLLCGREKPLKSTSIRPLPLLVHRSRLCCRRLYRSFFAAGMACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADEFKVFQALSMGLLVGISVIGSFSFSGAQWPFQAVDTIIVLGAVTTRVSFAVRARFVCLLGGNFWNPKVGLTSVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQITGYFVLAGANASSAIAFTYTATGRATPIIPFSTYVRV 348
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15185.1 vs. uniprot
Match: D8LSN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN7_ECTSI)

HSP 1 Score: 339 bits (869), Expect = 1.620e-113
Identity = 179/192 (93.23%), Postives = 184/192 (95.83%), Query Frame = 0 
Query:  106 MACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGAEWPFQAVDTIIVLGAVITVGLTGVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQIAGYFVLAGANASSAIAFTYTTTGRATTIIPFSIYVRV 297
            MACNFSLATAMGGS SLPELYVLQTNYAVFLPVLMFGIPI+VDFWVQSLPMHLLP+HSFLAKAKVLADKF VFQALSMGLLV ISV+GSFSF GA+WPFQAVDTIIVLGAV TVGLTGV+AHQIIGCIDDARAKSSSQSAKVFY KTKAGILKQIAGYFVLAGANASSAIAFTYT TGRAT IIPFSIYVRV
Sbjct:    1 MACNFSLATAMGGSRSLPELYVLQTNYAVFLPVLMFGIPIIVDFWVQSLPMHLLPNHSFLAKAKVLADKFNVFQALSMGLLVSISVVGSFSFSGAKWPFQAVDTIIVLGAVTTVGLTGVLAHQIIGCIDDARAKSSSQSAKVFYDKTKAGILKQIAGYFVLAGANASSAIAFTYTATGRATAIIPFSIYVRV 192
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15185.1 vs. uniprot
Match: D8LSN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN6_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 5.290e-102
Identity = 169/207 (81.64%), Postives = 177/207 (85.51%), Query Frame = 0 
Query:   91 MRFRVLLCGSFFAVGMACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGAEWPFQAVDTIIVLGAVITVGLTGVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQIAGYFVLAGANASSAIAFTYTTTGRATTIIPFSIYVRV 297
            MRFRVLLCG            L  + G + SLPELYVLQT+Y+VFLPVLMFGIPIVVDFW QSLPMHLLPDHSFLAKAKVLA KFK  QALSMGLLVGIS+IGSFSFGGAEWPF AVDTI V+GA  TVGLT +VAHQI+GCIDDARAKSSSQSAKVFY KTKAGILKQIAGYFVLAGANASSAI FTYT TGRAT IIPFSIYVRV
Sbjct:    1 MRFRVLLCGR-----NGLQLLLGDSDGRNRSLPELYVLQTSYSVFLPVLMFGIPIVVDFWAQSLPMHLLPDHSFLAKAKVLAGKFKAVQALSMGLLVGISLIGSFSFGGAEWPFHAVDTIAVVGAASTVGLTDLVAHQIVGCIDDARAKSSSQSAKVFYDKTKAGILKQIAGYFVLAGANASSAITFTYTATGRATAIIPFSIYVRV 202
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig7.15185.1 vs. uniprot
Match: A0A6H5JML4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML4_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 3.740e-84
Identity = 149/184 (80.98%), Postives = 152/184 (82.61%), Query Frame = 0 
Query:  136 LPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGAEWPFQAVDTIIVLGAVIT----------------------VGLTGVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQIAGYFVLAGANASSAIAFTYTTTGRATTIIPFSIYVRV 297
            LPVLMFGIPIVVDFWVQSLPMHLLPDHS LAKAKVLAD+F VFQALSMGLLVGI++IGSFSF GA WPFQAVDTIIVLGAV T                      VGLT VVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQI GYFVLAGANASSAIAFTYT TGRAT IIPFSI VRV
Sbjct:    3 LPVLMFGIPIVVDFWVQSLPMHLLPDHSLLAKAKVLADEFNVFQALSMGLLVGIALIGSFSFSGARWPFQAVDTIIVLGAVTTRVSFAVRARFVCLLGGNFWNPKVGLTSVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQITGYFVLAGANASSAIAFTYTATGRATPIIPFSIDVRV 186
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JMA3_9PHAE2.990e-17880.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSN7_ECTSI1.620e-11393.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSN6_ECTSI5.290e-10281.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JML4_9PHAE3.740e-8480.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 280..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 199..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..279
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 291..310
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 311..406
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 234..259
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 261..283
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 288..310
NoneNo IPR availableTMHMMTMhelixcoord: 93..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:2012283..2016910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15185.1mRNA_E-siliculosus-1a_M_contig7.15185.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 2012283..2016910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15185.1 ID=prot_E-siliculosus-1a_M_contig7.15185.1|Name=mRNA_E-siliculosus-1a_M_contig7.15185.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=407bp
MTACVSGCRHPLWGGNGACTTVSGASTCLCDSGYASRDSMGRSSCVPRSV
LVTAYATIAVTSLFTSIFLLWHANKFRQLSRLHRSTRSALMRFRVLLCGS
FFAVGMACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFW
VQSLPMHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGA
EWPFQAVDTIIVLGAVITVGLTGVVAHQIIGCIDDARAKSSSQSAKVFYA
KTKAGILKQIAGYFVLAGANASSAIAFTYTTTGRATTIIPFSIYVRVLTG
VLAFGPFAVFTRFGPSATRRPQPPPSPQSPLEEARQQEKETRTDDRSLIQ
KATSGVSSLFSRVLDHVESGEAVVAVTYEDTGIQGSRNEYDPGGGTSQTK
GIGKGP*
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