prot_E-siliculosus-1a_M_contig7.15170.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15170.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15170.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length294
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: D7FN76_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN76_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 2.010e-156
Identity = 246/293 (83.96%), Postives = 250/293 (85.32%), Query Frame = 0
Query:    1 MDKRVRVAAVLAGLVGVAMAQSGVGSSGGDMNENAASAGEGEPPQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPTAFDMEGGGAIGXXXXXXXXXXXXXXXXXXXXMQARLSXXXXXXXXXXLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE 293
            MDKRVRVAAVLAGLVGV MAQSGVGSS GDMNENA SAGEGEPPQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGA+GALAVMTVLSAALG+ALPAIL RTYTHY SALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGP AFDMEGGGAIG                        +            +MTFLAEWGDRSQIATIALAT KDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE
Sbjct:    1 MDKRVRVAAVLAGLVGVTMAQSGVGSSSGDMNENAVSAGEGEPPQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPRTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIGGAGGGG------------------VRSRRGAVMTMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE 275          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: A0A6H5KTH0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTH0_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 6.730e-134
Identity = 231/275 (84.00%), Postives = 237/275 (86.18%), Query Frame = 0
Query:    1 MDKRVRVAAVLAGLVGVAMAQSGVGSSGGDMNENAASAGEGEPPQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPTAFDMEGGGAIGXXXXXXXXXXXXXXXXXXXXM--------QARLSXXXXXXXXXXLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAAR 267
            MDKRVRVAAVLAGLVGVAMAQSGVGS+ GDMNENAASAGEG+P QVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALG+ALPA+LSRTYTHY SALLFLYFG RMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGP AFD+EGGGAIG XXXXXXXXXXX                  A L            +MTFLAEWGDRSQIATIALAT KDPFGVTAGGVIGHSLCTGMAVIGGKLLAAR
Sbjct:    1 MDKRVRVAAVLAGLVGVAMAQSGVGSTSGDMNENAASAGEGKPRQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGYALPAVLSRTYTHYASALLFLYFGCRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDLEGGGAIGGXXXXXXXXXXXRRASTAAKCCLRCAALADAPLRLGDSVVLTMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVIGHSLCTGMAVIGGKLLAAR 275          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: A0A836CAP1_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP1_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.130e-81
Identity = 166/247 (67.21%), Postives = 182/247 (73.68%), Query Frame = 0
Query:   47 GFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKEGMESH-GGPSEELTEVEEELAKKREGEAKKSGPTAFDMEGGGAIGXXXXXXXXXXXXXXXXXXXXMQARLSXXXXXXXXXXLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFG 292
            GFW  F + V MIIATEIGDKTFFIAAIMAM + R+ VF GAI ALA+MTVLSAALGFALP IL R YTHY  ALLFLYFG +MLKEG E+  GGPSEEL EVE+EL  KR  +    G        G    XXXXXXXXXXXXXXXXX     A             L +TFLAEWGDRSQIATIALA  KD  GVT GG++GHSLCTGMAV+GG+LLAARISE+TVHLVGG LFLVFGLH+L+FG
Sbjct:   91 GFWGGFVSGVGMIIATEIGDKTFFIAAIMAMQYSRMLVFAGAITALAIMTVLSAALGFALPNILPREYTHYAGALLFLYFGVKMLKEGFEADDGGPSEELAEVEQELMLKRNAD---EGDVEQTPHSGNGXXXXXXXXXXXXXXXXXXXADKKDA------WGVFSQGLTLTFLAEWGDRSQIATIALAAAKDVVGVTVGGILGHSLCTGMAVVGGRLLAARISERTVHLVGGGLFLVFGLHSLIFG 328          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: A0A7S2HJF0_9STRA (GDT1 family protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJF0_9STRA)

HSP 1 Score: 241 bits (616), Expect = 6.030e-75
Identity = 142/255 (55.69%), Postives = 168/255 (65.88%), Query Frame = 0
Query:   48 FWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKEGMESHGG-PSEELTEVEEELAKKRE--------GEAKKSGPTAFDMEGGGAIGXXXXXXXXXXXXXXXXXXXXMQARLSXXXXXXXXXXLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE 293
            FW AF NS  MII TEIGDKTFFIAA++AM H R A+F GA+ ALA+MTVLSAA+GFALP +L R YTHY SALLFLYFG R+LK+  E  GG PS+EL EVEEEL  K++        G+  KSG     M+ G                         QA               +TFLAEWGDRSQIATIALA  KDPFGVT GG+IGHSLCTG+AV+GG+LLAARISEKTV +VGG LFL+F +H+ ++ +
Sbjct:  116 FWAAFINSWLMIIVTEIGDKTFFIAAVLAMRHSRGAIFTGAVAALALMTVLSAAMGFALPNLLPRKYTHYASALLFLYFGIRLLKDASEMRGGGPSDELQEVEEELISKKDCNETSLENGQESKSGR----MKNGDTT------------------RIITQA-------------FTLTFLAEWGDRSQIATIALAAAKDPFGVTLGGIIGHSLCTGIAVVGGRLLAARISEKTVAMVGGTLFLIFAVHSFIYPD 335          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: A0A7R9YEB3_9STRA (GDT1 family protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEB3_9STRA)

HSP 1 Score: 239 bits (610), Expect = 3.270e-74
Identity = 135/249 (54.22%), Postives = 165/249 (66.27%), Query Frame = 0
Query:   46 VGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPTAF--DMEGGGAIGXXXXXXXXXXXXXXXXXXXXMQARLSXXXXXXXXXXLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFG 292
            +GF  AF  S+AMII TE+GDKTFFIAA++AM H R+ VF GA+ ALA+MTVLS  +G+ LP++L R YTH+ SA+LFLYFG R+L E  E   GPSEEL EVEEEL  K++      GP     D E    +                     +QA +             +TFLAEWGDRSQIATIALA+ KDP GVTAGGVIGH LCTG+AV+GG++LAARISEKTV +VGG LFL+F LHA ++G
Sbjct:   99 LGFVPAFVKSLAMIIVTELGDKTFFIAAVLAMKHSRMLVFAGALSALALMTVLSTMVGYTLPSLLPRAYTHFASAILFLYFGVRLLYESRELSSGPSEELREVEEELIHKKD-----QGPDGSLRDPEDDAKL-----------------KKAAVQASVLDEQSKIFAQSFTLTFLAEWGDRSQIATIALASAKDPLGVTAGGVIGHGLCTGLAVVGGRILAARISEKTVSIVGGILFLLFALHAFIWG 325          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: F0Y333_AURAN (GDT1 family protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y333_AURAN)

HSP 1 Score: 231 bits (589), Expect = 1.940e-72
Identity = 136/247 (55.06%), Postives = 162/247 (65.59%), Query Frame = 0
Query:   48 FWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKEGMESHG-GPSEELTEVEEELAKKREGEAKKSGPTAFDMEGGGAIGXXXXXXXXXXXXXXXXXXXXMQARLSXXXXXXXXXXLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE 293
            F  AF NS+ MI ATEIGDKTFFIAAI+AM H RL +F GA+ ALAVMTVLSAA+G+ALPA++ RTYTHY SALLF YFG RMLK+     G G SEEL EVEEEL     G  KK      D+E  GA                                        +TFLAEWGDRSQIATIALA+ KDP+GVTAGG++GHS+CTG+AV+GG++LA+RISEK VH+VGG +FLVF  ++  F +
Sbjct:    1 FAAAFVNSMGMIWATEIGDKTFFIAAILAMKHARLVIFLGAVSALAVMTVLSAAMGYALPALMPRTYTHYASALLFFYFGCRMLKDASSMSGSGVSEELGEVEEELG--GAGHGKK------DVEDDGAEAPPPAE--------------------ETDAVKVLGQAFMLTFLAEWGDRSQIATIALASAKDPYGVTAGGIVGHSMCTGLAVVGGRMLASRISEKHVHVVGGLIFLVFAAYSFFFED 219          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: A0A4D9CVK3_9STRA (GDT1 family protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK3_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.870e-72
Identity = 149/268 (55.60%), Postives = 180/268 (67.16%), Query Frame = 0
Query:   47 GFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKE--GMESHGGPSEELTEVEEELAKKREGEAK---------KSGPTAFDMEGGGAIGXXXXXXXXXXXXXXXXXXXXMQARLSXXXXXXXXXX-----------LAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFG 292
            GFW AF NS++MI+ TE+GDKTFFIAA++AM + RL +FGGAI AL +MT+LSAA+G  LP +L R YTHY SALLFLYFG +++ E  GME   GPS+EL EVEEEL  K+EG A          ++G      +G G   XXXXXXXXXXXX           R+                      L +TFLAEWGDRSQIATIALA  KDP+GVTAGG++GHSLCTG+AV+GG++LAARISEKTV   GG LFLVF  H+L+ G
Sbjct:  104 GFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAISALIIMTILSAAIGNVLPNVLPRIYTHYASALLFLYFGIKLIVEARGMEG-SGPSDELQEVEEELIHKKEGRASPHTLEMTQLENGNGESHAQGSGGFEXXXXXXXXXXXXKGASPAGGAHGRMGSYAQGEGKAKGNAATKVFTQALTLTFLAEWGDRSQIATIALAAAKDPYGVTAGGILGHSLCTGLAVLGGRMLAARISEKTVASTGGVLFLVFCAHSLIVG 370          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: A0A7S2RJT4_9STRA (GDT1 family protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT4_9STRA)

HSP 1 Score: 234 bits (598), Expect = 3.000e-72
Identity = 134/249 (53.82%), Postives = 165/249 (66.27%), Query Frame = 0
Query:   47 GFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKEGMESHG-GPSEELTEVEEELA-KKREGEAKKSGPTAFDMEGGGAIGXXXXXXXXXXXXXXXXXXXXMQARLSXXXXXXXXXXLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE 293
            GFW AF NS  MII TE+GDKTFFIAA++AM   R AV+ GA+GALA MTVLSA +GF LP +L R YTHY SA LF+YFGF++LKE  E  G GPS+EL EVE+EL  KK EG+          +E G A+                      +A  +            +TFLAEWGDRSQIATIA+A  KDPFGVT GG+IGH++CTG+AVIGG++LA+RISEKTV +VGG LFL F +H+++  E
Sbjct:  112 GFWAAFLNSFLMIIVTELGDKTFFIAAVLAMRQDRWAVYLGAVGALAAMTVLSAIMGFMLPNLLPRQYTHYASAALFVYFGFKLLKEASEMEGDGPSDELQEVEDELIHKKEEGDV---------LENGDAVAPGASPPS--------------RAFANQAVTRTLTQSFTLTFLAEWGDRSQIATIAMAAAKDPFGVTIGGIIGHAICTGIAVIGGRMLASRISEKTVAIVGGVLFLGFAVHSILVPE 337          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: A0A7S3UU97_HETAK (GDT1 family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU97_HETAK)

HSP 1 Score: 233 bits (593), Expect = 3.280e-72
Identity = 143/248 (57.66%), Postives = 163/248 (65.73%), Query Frame = 0
Query:   48 FWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKEG--MESHGGPSEELTEVEEELAKKREGEAKKSGPTAFDMEGGGAIGXXXXXXXXXXXXXXXXXXXXMQARLSXXXXXXXXXXLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE 293
            F  AF  SV MI+ATE+GDKTFFIAAI+AM H R  +FGGAIGALA+MTVLS  +GFALP+++ RTYTHY SALLFLYFG R+LK+G  ME  GGPSEEL EVE                            XXXXXX               QA               +TFLAEWGDRSQIATIALA  KDP+GVTAGG IGH+LCTG+AV+GG++LAARISEKTVHL GGALFL+F  H+L F E
Sbjct:   64 FMPAFVKSVLMIVATELGDKTFFIAAILAMRHSRFLIFGGAIGALALMTVLSTLMGFALPSLIPRTYTHYASALLFLYFGVRLLKDGAGMEG-GGPSEELAEVEXXXX--------------XXXXXXXXXXXXXXXXSPTHVGKRTNCQIAAQA-------------FTLTFLAEWGDRSQIATIALAAAKDPYGVTAGGCIGHALCTGLAVVGGRMLAARISEKTVHLTGGALFLLFAAHSLFFEE 283          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Match: A0A7S3D9J8_9EUKA (GDT1 family protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D9J8_9EUKA)

HSP 1 Score: 233 bits (595), Expect = 7.990e-72
Identity = 136/253 (53.75%), Postives = 166/253 (65.61%), Query Frame = 0
Query:   48 FWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGFALPAILSRTYTHYLSALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKR-EGEAKK------SGPTAFDME-GGGAIGXXXXXXXXXXXXXXXXXXXXMQARLSXXXXXXXXXXLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFG 292
            F  AF  S++MII +E+GDKTFFIAAI+AM   R+ VF GAI AL VMT LSA +G+ALPA+L R YTHY SA+LFL+FG+++LKEG ES GG S EL EVEEEL +K  EGE         SG    D E GG                         +A L+            MTFLAEWGDRSQIATIALA+ KDP+GVT GG IGH++CTG+AV+GG++LA++ISEKTV L GGALFLVF +++   G
Sbjct:   80 FVEAFVQSISMIIVSELGDKTFFIAAILAMKSNRVVVFSGAIAALGVMTALSAMMGYALPALLPRQYTHYASAVLFLFFGYKLLKEGYESEGGASSELQEVEEELEEKEHEGEGGSXXXXXXSGGEEADPEVGGRGSTGAPSLATNIKTWIAKVEADAKKALLAFNVPPIFVQTFTMTFLAEWGDRSQIATIALASAKDPYGVTIGGTIGHAICTGIAVLGGRMLASKISEKTVSLAGGALFLVFAVYSFAVG 332          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN76_ECTSI2.010e-15683.96GDT1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KTH0_9PHAE6.730e-13484.00GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A836CAP1_9STRA2.130e-8167.21GDT1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2HJF0_9STRA6.030e-7555.69GDT1 family protein n=1 Tax=Dictyocha speculum Tax... [more]
A0A7R9YEB3_9STRA3.270e-7454.22GDT1 family protein n=2 Tax=Pinguiococcus pyrenoid... [more]
F0Y333_AURAN1.940e-7255.06GDT1 family protein (Fragment) n=1 Tax=Aureococcus... [more]
A0A4D9CVK3_9STRA2.870e-7255.60GDT1 family protein n=1 Tax=Nannochloropsis salina... [more]
A0A7S2RJT4_9STRA3.000e-7253.82GDT1 family protein n=1 Tax=Rhizochromulina marina... [more]
A0A7S3UU97_HETAK3.280e-7257.66GDT1 family protein n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S3D9J8_9EUKA7.990e-7253.75GDT1 family protein n=1 Tax=Palpitomonas bilix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001727Gdt1 familyPFAMPF01169UPF0016coord: 215..285
e-value: 3.1E-22
score: 78.7
coord: 55..127
e-value: 2.9E-20
score: 72.4
IPR001727Gdt1 familyPANTHERPTHR12608TRANSMEMBRANE PROTEIN HTP-1 RELATEDcoord: 49..290
IPR001727Gdt1 familyPROSITEPS01214UPF0016coord: 63..72
NoneNo IPR availablePANTHERPTHR12608:SF1TRANSMEMBRANE PROTEIN 165coord: 49..290
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..291
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 292..293
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..271
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.763
NoneNo IPR availableTMHMMTMhelixcoord: 109..128
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 272..291
NoneNo IPR availableTMHMMTMhelixcoord: 44..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1895097..1904069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15170.1mRNA_E-siliculosus-1a_M_contig7.15170.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1894944..1905174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15170.1 ID=prot_E-siliculosus-1a_M_contig7.15170.1|Name=mRNA_E-siliculosus-1a_M_contig7.15170.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=294bp
MDKRVRVAAVLAGLVGVAMAQSGVGSSGGDMNENAASAGEGEPPQVGFWT
AFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSA
ALGFALPAILSRTYTHYLSALLFLYFGFRMLKEGMESHGGPSEELTEVEE
ELAKKREGEAKKSGPTAFDMEGGGAIGGAGGVRAAGGRRASTAAKSLMQA
RLSEAAAAPPPPPLAMTFLAEWGDRSQIATIALATTKDPFGVTAGGVIGH
SLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001727Gdt1