mRNA_E-siliculosus-1a_F_contig1571.3303.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: A0A6H5KDV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV2_9PHAE) HSP 1 Score: 926 bits (2393), Expect = 0.000e+0 Identity = 482/498 (96.79%), Postives = 487/498 (97.79%), Query Frame = 1
Query: 31 MTARKWSFYLAIVAALLGCPVDVVDGLVGTPFVRRGGRRPYAHRNTCIGSAGPPAESRLKAEAVAEESRSTSSEKSGERRGEDRFERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGLLAASGAAYAFTEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAASSDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLDDVAKSLGVPGAKGGAPTKEVVIRRGAEVVNAETLEDLRALLGAAEGAGGGDSAVWTALRTVCEAELSQVRPDAQGTAGDAGRTVRERLALAFRREKA 1524
MTARKW F LA+VAALLGCPVDVVDGLVGTPFVRRGGRRPYA RNTCIGSA PPAESRLKAEAVAE+SRSTSSEKSGERRGEDRFERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLP QGSFETLIHWTDQELD LKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGL AASGAAYA TEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAA+SDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLDDVAKSLGVPGAKGGAPTKEVVIRRGAEVV+AETLE+LRALLGAAEG GGGDSAVWTALRTVCEAELSQVRPDAQG AGDAGRTVRERLA AFRREKA
Sbjct: 1 MTARKWGFCLAVVAALLGCPVDVVDGLVGTPFVRRGGRRPYARRNTCIGSARPPAESRLKAEAVAEDSRSTSSEKSGERRGEDRFERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPVQGSFETLIHWTDQELDTLKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGLFAASGAAYAVTEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAAASDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLDDVAKSLGVPGAKGGAPTKEVVIRRGAEVVSAETLENLRALLGAAEGPGGGDSAVWTALRTVCEAELSQVRPDAQGAAGDAGRTVRERLASAFRREKA 498
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: D7G8L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L0_ECTSI) HSP 1 Score: 514 bits (1325), Expect = 2.140e-179 Identity = 263/274 (95.99%), Postives = 266/274 (97.08%), Query Frame = 1
Query: 31 MTARKWSFYLAIVAALLGCPVDVVDGLVGTPFVRRGGRRPYAHRNTCIGSAGPPAESRLKAEAVAEESRSTSSEKSGERRGEDRFERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSA 852
MTARKW FYLAIVAA LGCPVDVVDGLVGTPFVRRGGRRPYA RNTCIGSA PPAES LKAEAVA++SRSTSSEKSGERRGEDRFERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDAL+YSRCAASAKRQRAAWDKLHEDLV RCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSA L A
Sbjct: 1 MTARKWGFYLAIVAAWLGCPVDVVDGLVGTPFVRRGGRRPYARRNTCIGSARPPAESCLKAEAVAQDSRSTSSEKSGERRGEDRFERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALEYSRCAASAKRQRAAWDKLHEDLVVRCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAPLMA 274
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: D7G3V3_ECTSI (Protein N-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V3_ECTSI) HSP 1 Score: 259 bits (663), Expect = 1.190e-81 Identity = 132/139 (94.96%), Postives = 135/139 (97.12%), Query Frame = 1
Query: 1108 VNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLDDVAKSLGVPGAKGGAPTKEVVIRRGAEVVNAETLEDLRALLGAAEGAGGGDSAVWTALRTVCEAELSQVRPDAQGTAGDAGRTVRERLALAFRREKA 1524
+ +GYREGEQAYISYGLKSNDELLQFYGFVEADCPADT+VLDDVAKSLGVPGAKGGAPTKEVVIRRGAEVVNAETLEDLRALLGA EGAGGGDS VWTALRTVCEAELS VRPDAQGTAGDAGRTVRERLALAFRREKA
Sbjct: 1 MTKGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTFVLDDVAKSLGVPGAKGGAPTKEVVIRRGAEVVNAETLEDLRALLGAEEGAGGGDSTVWTALRTVCEAELSHVRPDAQGTAGDAGRTVRERLALAFRREKA 139
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: A0A7S3XNH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNH5_HETAK) HSP 1 Score: 252 bits (644), Expect = 1.750e-71 Identity = 147/320 (45.94%), Postives = 195/320 (60.94%), Query Frame = 1
Query: 283 FERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLS---AGLLAASGAAYAFTEQPVWVLVAALAL-LPLTLPELGSLQAAVSGKPDAKAASSDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVL 1230
FE WA I+ LRHE F + L ++G+KA+ +QLV +P K IS SE PF W+S FWD Q Y++LALKLLWE++LG SAV+ YV++LP + +TL +WTD+ELD L+Y S RQR WD+LH+ LV+ P GA A ++L WAL CVLSRAF G G Q A L+ A LLA +G Y + P W L AA AL LP TL E + D + S+ VL+P +DS+NH T+ +T+L F+P++ G+SV + + GEQ +ISYGLK+NDELLQF+GFVE PAD +
Sbjct: 66 FENWAQNKNIKFDGLRHEQF-EFLGSKIQGIKALGKVDAGKQLVQLPKKFTISTYVSEKCPFPGWISNSFWDKQPNYIRLALKLLWEKKLGENSAVQAYVDLLPDPENLDTLYYWTDEELDLLRYPVLKNSVLRQRKEWDELHKQLVSSSPGGAEGAPAPEELAWALGCVLSRAFAGARTGLQNRATLAVQLAALLAGAGL-YVAQDSP-WGLAAAAALALPGTLQEARTAM-------DPELQKSELVLLPMIDSINHQTTVETDLGFNPLTESFGISVKQSFETGEQVFISYGLKTNDELLQFFGFVEKQNPADVWAF 375
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: A0A7S3XME2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XME2_HETAK) HSP 1 Score: 252 bits (644), Expect = 2.170e-71 Identity = 147/320 (45.94%), Postives = 195/320 (60.94%), Query Frame = 1
Query: 283 FERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLS---AGLLAASGAAYAFTEQPVWVLVAALAL-LPLTLPELGSLQAAVSGKPDAKAASSDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVL 1230
FE WA I+ LRHE F + L ++G+KA+ +QLV +P K IS SE PF W+S FWD Q Y++LALKLLWE++LG SAV+ YV++LP + +TL +WTD+ELD L+Y S RQR WD+LH+ LV+ P GA A ++L WAL CVLSRAF G G Q A L+ A LLA +G Y + P W L AA AL LP TL E + D + S+ VL+P +DS+NH T+ +T+L F+P++ G+SV + + GEQ +ISYGLK+NDELLQF+GFVE PAD +
Sbjct: 66 FENWAQNKNIKFDGLRHEQF-EFLGSKIQGIKALGKVDAGKQLVQLPKKFTISTYVSEKCPFPGWISNSFWDKQPNYIRLALKLLWEKKLGENSAVQAYVDLLPDPENLDTLYYWTDEELDLLRYPVLKNSVLRQRKEWDELHKQLVSSSPGGAEGAPAPEELAWALGCVLSRAFAGARTGLQNRATLAVQLAALLAGAGL-YVAQDSP-WGLAAAAALALPGTLQEARTAM-------DPELQKSELVLLPMIDSINHQTTVETDLGFNPLTESFGISVKQSFETGEQVFISYGLKTNDELLQFFGFVEKQNPADVWAF 375
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: W7TX23_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX23_9STRA) HSP 1 Score: 172 bits (437), Expect = 1.030e-43 Identity = 119/332 (35.84%), Postives = 165/332 (49.70%), Query Frame = 1
Query: 283 FERWAAQAGIRAPKLRHEVF-ADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALK--YSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRD----DLVWALECVLSRAFNGRFGGGQKSAVLSAGLLAASGAAYAFTEQPVWVLVAAL------ALLPLTLPELGSLQAAVSGKPDAKAASSDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLDDV 1239
FER +GI A L H +F G RGLK + L+ +P AI L ESTPF WV + W WY +L LKL++ER+ ++ GY +LP T +HW +++L+AL+ Y A RQR W L++ L G RAV D VWA+E VLSRAF G FG G S S L+A Y ++ + +L AL A++P L L SL K + YVL P +DS+NH ++ T+L + V +S+ ++ G+Q ++SYG KSND+LL YGFVE D AD + D+
Sbjct: 75 FERRLKDSGIDAEGLEHALFWPQGDTAPSRGLKTNLNIPLGKVLIKLPRSQAICLDEGESTPFPQWVPQKQWKKMPWYAQLGLKLVYERKTSTSALKAGYTQLLPPPEGIPTPLHWPEEDLNALRGVYPVLAGKVDRQRQLWAGLYDAL------GKTRAVREDMDETTFVWAMESVLSRAFKGTFGTGFNSLAPSLLLVALFAGIYYLDQETIQLLSYALEEYPYLAVIPGALVLLPSLLEFFRSK-------ATYVLAPMIDSLNHRSTVPTDLDYDSVRQRFRLSLGEDFKAGQQVFMSYGDKSNDDLLFHYGFVEVDAAADVFEFGDL 393
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: A0A0G4FC07_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FC07_VITBC) HSP 1 Score: 171 bits (434), Expect = 3.390e-43 Identity = 124/345 (35.94%), Postives = 173/345 (50.14%), Query Frame = 1
Query: 280 RFERWAAQ-AGIRAPKLRHEVFADGLVGD----------LRGLKAVEATSKSEQLVTVPAKAAISLTASESTP--FRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVAR-CPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGLLAASGAAYAFT-----------EQPVWVLVA--ALALLPLTLPELGSLQAAVSGKPDAKAASSDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLD 1233
RFE+WA + A + + H F D G RG+K E L+ VP AAI TA+ + P W++ +W V+LALKLL E++ G AS YV LP GSF T +HW+D EL LK R KRQR W LHEDL+ R + +G +++ +D WALE V SRAF G F Q S +L L A A AF + P+ ++VA A ALLP G +A+ G+ A SD LVP +DS+NH+T ++ + + V ++ ++ G+Q +++ G KSND LQ+ GFVE P+D + LD
Sbjct: 104 RFEQWAREKARVMFQSVSHGYFLDSNRGKPALSLAALQRCRGVKVNADVKAGEALIAVPIDAAIVATANGTLPEELSGWLNAPYWKEASLPVRLALKLLHEKEKGEASEWAEYVAFLPPVGSFPTPLHWSDDELQKLKLGRMIEMVKRQREGWRGLHEDLLQRGLKDASGGSLSWEDFAWALEIVSSRAFAGNFT--QTSPLLLGALQLAWAIAVAFAIVQLYTSSGQADPPIPLIVAGGAAALLP------GIASSALEGRRGADKGGSDLALVPVLDSVNHLTVSEAQFGYDGVKRAFTLTADKDQGPGDQVFLNVGEKSNDYWLQYGGFVERRNPSDDFTLD 440
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: A0A6H5LFY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFY0_9PHAE) HSP 1 Score: 167 bits (424), Expect = 5.340e-42 Identity = 123/336 (36.61%), Postives = 177/336 (52.68%), Query Frame = 1
Query: 283 FERWAAQA-GIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGG-----GQKSAVLSAGLLAA-SGAAYAF-TEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAASSDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTY----VLDDVAKSLG 1254
F RWA + G++APKL+ F DGL RGL A + +K++++V VP+++A+ T + PF WVS EFW S W V+LAL LL E+Q GA S +E +++ LP SF T + W+ EL L+Y AK QR W + L+A P G V ++L WA+ SRAF R+ G G K + ++A +G + A P V A A+L L++P + Y L P VD +NH + +++S++ G V+ RG+ GEQ +ISYG +SND LLQ YGFVE D P D Y ++D ++ LG
Sbjct: 98 FLRWAGEEIGVKAPKLKGS-FVDGL----RGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKEFWASSPWQVRLALLLLREKQKGAGSELEPWISRLPE--SFGTPVSWSAAELLELQYPHLEVVAKEQREEWKGYYSSLMASSP---GCGVAEEELSWAIGVAYSRAFR-RYSGPYEGRGPKERLAEVAFVSALAGGSLALGLGTPDQVANGAFAVL-LSIPLRDFFMTKL-------VQLKRYALTPVVDLINHQSGIDSDVSYNYFYGYFAVTTQRGWTAGEQVFISYGPRSNDHLLQRYGFVEQDNPNDVYRITGLIDKLSDVLG 414
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: A0A5J4XRG8_9CHLO (N-methyltransferase (ISS) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XRG8_9CHLO) HSP 1 Score: 160 bits (405), Expect = 2.730e-41 Identity = 104/308 (33.77%), Postives = 164/308 (53.25%), Query Frame = 1
Query: 373 LKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGLLAASGAAYAFT----EQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAASSDY-----------VLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLDDVAKSL 1251
+ A A + + +VT+P AA+ +T PF + +W QW+ K+AL LL ER+ G SAV GY+ LPA+ F+TL HW+ +EL L Y ++Q+ W ++++ A + V D+LVWALECV SRAF+G + G ++ L+A A Y ++ ++ VL LA L T L+ ++G A + Y + P +DSMNH +++ E+++ V+ R Y++GEQ +I+YG +SND+LLQ+YGFVE+ PAD YV+ ++ +L
Sbjct: 1 MAAATAINTGDSVVTLPRTAALLVTPKMKCPFPDLIDQAYWAKSQWFEKMALMLLHERKKGKNSAVSGYIEQLPAR--FDTLFHWSPEELQLLMYPPLIQQVQQQKQYWHDHYKNVKAASSDNP---VGEDELVWALECVRSRAFSGPYSGESQTTGLTAQTPVI--ARYCWSPPVKDRAKLVLPFVLAALAYTQVAHLPLEQILNGAIAAVLFNIIYDTLLSRKLRWFAMCPVIDSMNHQSTSTNEVAYEYFGDRFSVTAERKYKQGEQVFITYGQQSNDKLLQYYGFVESKNPADVYVVTNMLHAL 301
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Match: A0A7S3EP57_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EP57_9RHOD) HSP 1 Score: 158 bits (400), Expect = 1.740e-39 Identity = 113/328 (34.45%), Postives = 176/328 (53.66%), Query Frame = 1
Query: 292 WAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAI-SLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGR-----FGGGQKSAVLSAGL-LAASGAAYAFTEQPVWVL-VAALALLPLTLPELGSLQAAVSGKPDAKAASSDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVNRGYREGEQAYISYGLKSNDELLQFYGFVEADCPADTYVLDDVAKSL 1251
WA GI+ + FA G++RG+ A + S +V VP + + S + E+ P S+V+ +W SQ+W+V+LAL+L++++Q + GYVN LP +F T HWT +EL +Y Q+ W +LH L + R+V D+ VWALECV SRAF+G FG K+ + L +AA A +EQ + L +A +ALL L +Q A+ G+ + Y+L P +D NH + A++++S+ + Y++GEQ +ISYG +SND+LLQ+YGFVE + P D YV+ + +S+
Sbjct: 36 WARDGGIQWNVMNLHTFA----GNVRGMIAEQDFDASSAIVKVPKEMVLESNSIPETNPIPSFVTSSYWKSQRWWVRLALRLVYQKQTDKKPNLSGYVNALPK--TFSTPFHWTAEELQETQYIPIQKQVVNQQQEWKRLHRLLTENLKDE--RSVEFDEFVWALECVRSRAFSGEAEATPFGERLKTIAFAGALSVAALTLHLADSEQVLNGLSLAVIALLSYDL-IYPRVQKAIGGEEWKR-----YILCPIIDFCNHSSRAESDISYEYFFSSFVLKTGP-YKKGEQVFISYGDRSNDQLLQYYGFVEENNPHDVYVVGETLQSV 348 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1571.3303.1 >prot_E-siliculosus-1a_F_contig1571.3303.1 ID=prot_E-siliculosus-1a_F_contig1571.3303.1|Name=mRNA_E-siliculosus-1a_F_contig1571.3303.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=500bp MTARKWSFYLAIVAALLGCPVDVVDGLVGTPFVRRGGRRPYAHRNTCIGSback to top mRNA from alignment at E-siliculosus-1a_F_contig1571:877..7150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1571.3303.1 ID=mRNA_E-siliculosus-1a_F_contig1571.3303.1|Name=mRNA_E-siliculosus-1a_F_contig1571.3303.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6274bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1571:877..7150- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1571:877..7150- >mRNA_E-siliculosus-1a_F_contig1571.3303.1 ID=mRNA_E-siliculosus-1a_F_contig1571.3303.1|Name=mRNA_E-siliculosus-1a_F_contig1571.3303.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3000bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1571:877..7150- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |