mRNA_E-siliculosus-1a_F_contig15647.3262.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15647.3262.1
Unique NamemRNA_E-siliculosus-1a_F_contig15647.3262.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0KUN3_SHESA (Uncharacterized protein n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0KUN3_SHESA)

HSP 1 Score: 585 bits (1509), Expect = 2.380e-205
Identity = 301/313 (96.17%), Postives = 304/313 (97.12%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            G RHRAA LATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDP LQRQRQLLIGRLQHLQRLGLADEIQPGTW+IHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADEL DRGYLVIDGVDGKAHYISLN  DELTNYPTGAVVEVR SAELR+ADRNIAELASDGLYRTDHHLVIEQGRTK G DPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGGRGFSDIG
Sbjct:  214 GFRHRAAELATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPALQRQRQLLIGRLQHLQRLGLADEIQPGTWNIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELRDRGYLVIDGVDGKAHYISLNTSDELTNYPTGAVVEVRCSAELRSADRNIAELASDGLYRTDHHLVIEQGRTKAGRDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGFSDIG 526          
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: UPI00163FA1B1 (relaxase/mobilization nuclease and DUF3363 domain-containing protein n=1 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00163FA1B1)

HSP 1 Score: 532 bits (1371), Expect = 1.870e-184
Identity = 272/313 (86.90%), Postives = 285/313 (91.05%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            GIRHRAA LATEWLGRRTELEIQQTLR EVEQERWTSLDRTL RE G DHRV+IERF DP LQRQ  LLIGRLQHL+RLGLADE+Q G WDIHADAEKTLRALGERGDIIRTLQRSMSGLSREL VFE  ESGR+++GRVAGKGLADELHDRGYLV+DGVDGKAHY++LNARDEL NYPTGAVVEVRG AE+R ADRNIAELASDGLYRTDHHLVIEQGR K G DPQE+VAAHVRRLEALRRVGIVERV EGLWKVPGDLPERGRQYD QRLG V VELKSHLPIERQ+RVIGATWLDQQLI GG G  D+G
Sbjct:  214 GIRHRAAELATEWLGRRTELEIQQTLRHEVEQERWTSLDRTLHREMGGDHRVRIERFNDPRLQRQ--LLIGRLQHLRRLGLADEVQSGIWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELAVFESDESGRTIVGRVAGKGLADELHDRGYLVVDGVDGKAHYVALNARDELANYPTGAVVEVRGFAEVRMADRNIAELASDGLYRTDHHLVIEQGRGKAGRDPQEVVAAHVRRLEALRRVGIVERVTEGLWKVPGDLPERGRQYDAQRLGDVTVELKSHLPIERQARVIGATWLDQQLICGGNGLGDLG 524          
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: I1YGS8_METFJ (Type IV secretory pathway, VirD2 components (Relaxase) n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=I1YGS8_METFJ)

HSP 1 Score: 524 bits (1350), Expect = 4.580e-184
Identity = 265/313 (84.66%), Postives = 284/313 (90.73%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            G RHRAA LATEWLG RTELEIQQTL+REVEQERWTSLDRTLQREAG+D RVQIERF +P LQRQR LLIGRLQ LQRLGLADE+QPGTW IHADAEKTLRALGERGDIIRT+QR+MSG  RELTVFEPGE GRS+IGRVA KGLADELHDRGYLVIDG DGKAHY++LNA DEL NYPTGAVVEV+GSA++RAAD+NIA LASDGLYR DHHL IEQGR K G DPQE+ AAHVRRLEALRR GIVERVAEGLWKVP DL ERGRQYD +RLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGG+G  ++G
Sbjct:   21 GFRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREAGEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGLADEVQPGTWAIHADAEKTLRALGERGDIIRTMQRAMSGQPRELTVFEPGEDGRSIIGRVAAKGLADELHDRGYLVIDGTDGKAHYVALNAHDELANYPTGAVVEVKGSADVRAADKNIAALASDGLYRADHHLAIEQGRAKPGRDPQEVAAAHVRRLEALRRAGIVERVAEGLWKVPDDLVERGRQYDARRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGKGLGNLG 333          
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: UPI00046574C7 (DUF3363 domain-containing protein n=1 Tax=Pseudomonas nitroreducens TaxID=46680 RepID=UPI00046574C7)

HSP 1 Score: 531 bits (1368), Expect = 7.830e-184
Identity = 267/313 (85.30%), Postives = 287/313 (91.69%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            G RHRAA LATEWLG RTELEIQQTL+REVEQERWTSLDRTLQREAG+D RVQIERF +P LQRQR LLIGRLQ LQRLGLADE QPGTW +HADA+KTLRALGERGDIIRT+QR+MSG  REL VFEPG+ GR++IGRVAGKGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYP GAVVEVRGSAE+RAAD+NIA LASDGLYRTDHHL IEQG+ K G DPQE+VAAHVRRLEALRR GIVERVA+GLWKVPGDL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGG+G  D+G
Sbjct:  224 GFRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREAGEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGLADETQPGTWAVHADADKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDGRTIIGRVAGKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPAGAVVEVRGSAEVRAADKNIAALASDGLYRTDHHLAIEQGQAKAGRDPQEVVAAHVRRLEALRRAGIVERVADGLWKVPGDLAERGRQYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGKGLGDLG 536          
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A1R1JRZ1_ALCXX (Type VI secretion protein n=15 Tax=Proteobacteria TaxID=1224 RepID=A0A1R1JRZ1_ALCXX)

HSP 1 Score: 529 bits (1363), Expect = 3.940e-183
Identity = 268/313 (85.62%), Postives = 285/313 (91.05%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            G RHRAA LATEWLG RTELEIQQTL+REVE+ERWTSLDRTLQREAG+D RVQIERF +P LQRQR LLIGRLQ LQRLGLADE+QPGTW IHADAEKTLRALGERGDIIRT+QR+MSG  REL VFEPG+ GR+VIGRVAGKGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYPTGAVVEVRGSA++RAAD+NIA LASDGLYR DHHL IEQGR   G DPQE+VAAHVRRLEALRR GIVERV EGLWKVP DL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGGRG  D+G
Sbjct:  221 GFRHRAAELATEWLGPRTELEIQQTLQREVEKERWTSLDRTLQREAGEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGLADEVQPGTWAIHADAEKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDGRTVIGRVAGKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPTGAVVEVRGSADVRAADKNIAALASDGLYRADHHLAIEQGRATAGRDPQEVVAAHVRRLEALRRAGIVERVTEGLWKVPDDLAERGRQYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGLGDLG 533          
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A640W653_9GAMM (DUF3363 domain-containing protein n=1 Tax=Salinicola corii TaxID=2606937 RepID=A0A640W653_9GAMM)

HSP 1 Score: 528 bits (1361), Expect = 6.310e-183
Identity = 271/313 (86.58%), Postives = 283/313 (90.42%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            G+RHRAA LATEWLGRRTELEIQQTL+REVEQERWTSLDRTLQREA DD RVQI RF DP LQRQRQLLIGRLQHLQ LGLA+E+QPG WDIH DAEKTLRALGERGDIIRTLQRSMSG SREL VFEPGES R V+GRVAGKGLADELHDRGYLVIDGVDGKAHY++L  RDELTNYPTGAVVEVRGSAE+RAADRNI  LASDGLYRTDHHLVIEQGR K   DPQE+VAAHVRRLEALRRVGIVERVAEGLWKV  DLPERGRQYD QRLGGV VELKSHLPIERQ+RVIGATWLD+QLI GG+   D G
Sbjct:  214 GVRHRAAELATEWLGRRTELEIQQTLQREVEQERWTSLDRTLQREADDDQRVQIARFNDPKLQRQRQLLIGRLQHLQCLGLANEVQPGIWDIHTDAEKTLRALGERGDIIRTLQRSMSGQSRELAVFEPGESRRPVVGRVAGKGLADELHDRGYLVIDGVDGKAHYVALTPRDELTNYPTGAVVEVRGSAEVRAADRNIIALASDGLYRTDHHLVIEQGRAKTRRDPQEVVAAHVRRLEALRRVGIVERVAEGLWKVSNDLPERGRQYDAQRLGGVTVELKSHLPIERQARVIGATWLDRQLIAGGKELGDQG 526          
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A0P9JC46_9PSED (Relaxase type IV secretory pathway VirD2 n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0P9JC46_9PSED)

HSP 1 Score: 525 bits (1352), Expect = 1.880e-181
Identity = 265/313 (84.66%), Postives = 282/313 (90.10%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            G RHRAA LATEWLG RTELEIQQTL+REVEQERWTSLDRTLQREA DD RVQIERF +PTLQRQR LLIGRLQ LQR+GLADE QPGTW +H DAEKTLR LGERGDIIRTLQR+MSG  REL VFEPG+ GRS++GRVAGKGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYP+GAVVEVRGSA +RAAD+NI  LASDGLYRTDHHL IEQGR K G DPQE+VAAHVRRLEALRR GIVERVA+GLWKVP DL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIG GRG  D+G
Sbjct:  221 GFRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREASDDGRVQIERFNEPTLQRQRLLLIGRLQRLQRMGLADETQPGTWTVHGDAEKTLRVLGERGDIIRTLQRAMSGQPRELAVFEPGDDGRSIVGRVAGKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPSGAVVEVRGSAAVRAADKNIVALASDGLYRTDHHLAIEQGRAKPGRDPQEVVAAHVRRLEALRRAGIVERVADGLWKVPNDLAERGRQYDGQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGSGRGLGDLG 533          
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: W9TCJ6_9PSED (VirD2 components relaxase n=24 Tax=root TaxID=1 RepID=W9TCJ6_9PSED)

HSP 1 Score: 523 bits (1348), Expect = 7.600e-181
Identity = 263/313 (84.03%), Postives = 283/313 (90.42%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            G RHRAA LATEWLG  TELEIQQTL+REVEQERWTSLDRTLQRE G+D RVQIERF +P LQRQR LLIGRLQHLQRLGLADE QPGTW +HAD EKTLRALGERGDIIRT+QR+MSG  REL VFEPG+  R+++GRVA KGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYPTGAVVEVRGSAE+RAAD+NIA LASDGLYRTDHHL IEQGR K G DPQE+VAAH+RRLEALRR GIVERVA+GLWKVP DL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGGRG  ++G
Sbjct:  221 GFRHRAAELATEWLGPHTELEIQQTLQREVEQERWTSLDRTLQREDGEDGRVQIERFNEPRLQRQRLLLIGRLQHLQRLGLADETQPGTWAVHADTEKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDDRTIVGRVAAKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPTGAVVEVRGSAEVRAADKNIATLASDGLYRTDHHLAIEQGRAKPGRDPQEVVAAHIRRLEALRRAGIVERVADGLWKVPDDLAERGRQYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGLGELG 533          
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A157SQQ7_9BORD (Conjugal transfer protein VirD2 n=18 Tax=Proteobacteria TaxID=1224 RepID=A0A157SQQ7_9BORD)

HSP 1 Score: 522 bits (1344), Expect = 2.700e-180
Identity = 262/313 (83.71%), Postives = 283/313 (90.42%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            G RHRAA LATEWLG RTELEIQQTL+REVEQ+RWTSLDRTLQREAG+D RVQ ERF +P LQRQR LLIGRLQ LQRLGLADE QPGTW +HADAEKTLRALGERGDIIRT+QR+MSG  REL VFEPG+ GR+++GRVA KGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYPTGAVVEVRGSAE+RAAD+NIA LASDGLYRTDHHL IEQGR K G DPQE+VA HVRRLEALRR GIVER A+GLWKVP DL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGG+G  ++G
Sbjct:  217 GFRHRAAELATEWLGPRTELEIQQTLQREVEQQRWTSLDRTLQREAGEDGRVQTERFNEPRLQRQRLLLIGRLQRLQRLGLADETQPGTWAVHADAEKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDGRTIVGRVAAKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPTGAVVEVRGSAEVRAADKNIAALASDGLYRTDHHLAIEQGRAKPGRDPQEVVAVHVRRLEALRRAGIVERAADGLWKVPDDLAERGRQYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGKGLGELG 529          
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A0U5DVJ4_STEMA (Putative type iv secretory pathway vird2 (Relaxase)-related protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0U5DVJ4_STEMA)

HSP 1 Score: 525 bits (1353), Expect = 4.700e-180
Identity = 265/313 (84.66%), Postives = 283/313 (90.42%), Query Frame = 1
Query:    1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
            G RHRAA LATEWLG RT+LEIQQTL+REVEQERWTSLDRTLQREA DD R+QIERF +P LQRQR LLIGRLQ LQRLGLADE+QPGTWDIHADAEKTLRALGERGDIIR LQR+MSG  REL VFEPGE GR+++GRVA KGLADELH RGYLVIDGVDGKAHY++L+ARDEL NYPTGAVVEVRGSAE R AD+NIA LASDGLYRTDHHL IEQGR K G DPQE+VAAHVRRLEALRR GIVERVAEGLWKVP DL ERGRQYD QRLGGVAVE+KSHLPIERQ+R+IGATWLDQQLIGGGRG  D+G
Sbjct:  338 GFRHRAAELATEWLGPRTKLEIQQTLQREVEQERWTSLDRTLQREADDDGRMQIERFNEPALQRQRLLLIGRLQRLQRLGLADEVQPGTWDIHADAEKTLRALGERGDIIRALQRAMSGQPRELAVFEPGEGGRAIVGRVAAKGLADELHGRGYLVIDGVDGKAHYVALDARDELANYPTGAVVEVRGSAEARVADKNIATLASDGLYRTDHHLAIEQGRAKAGRDPQEVVAAHVRRLEALRRAGIVERVAEGLWKVPEDLAERGRQYDAQRLGGVAVEVKSHLPIERQARIIGATWLDQQLIGGGRGLGDLG 650          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0KUN3_SHESA2.380e-20596.17Uncharacterized protein n=4 Tax=Gammaproteobacteri... [more]
UPI00163FA1B11.870e-18486.90relaxase/mobilization nuclease and DUF3363 domain-... [more]
I1YGS8_METFJ4.580e-18484.66Type IV secretory pathway, VirD2 components (Relax... [more]
UPI00046574C77.830e-18485.30DUF3363 domain-containing protein n=1 Tax=Pseudomo... [more]
A0A1R1JRZ1_ALCXX3.940e-18385.62Type VI secretion protein n=15 Tax=Proteobacteria ... [more]
A0A640W653_9GAMM6.310e-18386.58DUF3363 domain-containing protein n=1 Tax=Salinico... [more]
A0A0P9JC46_9PSED1.880e-18184.66Relaxase type IV secretory pathway VirD2 n=2 Tax=G... [more]
W9TCJ6_9PSED7.600e-18184.03VirD2 components relaxase n=24 Tax=root TaxID=1 Re... [more]
A0A157SQQ7_9BORD2.700e-18083.71Conjugal transfer protein VirD2 n=18 Tax=Proteobac... [more]
A0A0U5DVJ4_STEMA4.700e-18084.66Putative type iv secretory pathway vird2 (Relaxase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15647contigE-siliculosus-1a_F_contig15647:1..939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size939
Model size939
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelGammaproteobacteria
COG Functional cat.U
EggNOG OGs1MU0S@1224,1RYES@1236,COG3843@1,COG3843@2
EggNOG free text desc.Type IV secretory pathway VirD2
Preferred nametraI
Seed eggNOG ortholog94122.Shewana3_1268
Seed ortholog evalue1.9e-164
Seed ortholog score585.1
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928076.4786694-CDS-E-siliculosus-1a_F_contig15647:0..9391622928076.4786694-CDS-E-siliculosus-1a_F_contig15647:0..939Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15647 1..939 -
1696318797.0463727-CDS-E-siliculosus-1a_F_contig15647:0..9391696318797.0463727-CDS-E-siliculosus-1a_F_contig15647:0..939Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15647 1..939 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15647.3262.1prot_E-siliculosus-1a_F_contig15647.3262.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15647 1..939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15647.3262.1

>prot_E-siliculosus-1a_F_contig15647.3262.1 ID=prot_E-siliculosus-1a_F_contig15647.3262.1|Name=mRNA_E-siliculosus-1a_F_contig15647.3262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=313bp
GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDH
RVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTL
RALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELH
DRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIA
ELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERV
AEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQ
QLIGGGRGFSDIG
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mRNA from alignment at E-siliculosus-1a_F_contig15647:1..939-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15647.3262.1 ID=mRNA_E-siliculosus-1a_F_contig15647.3262.1|Name=mRNA_E-siliculosus-1a_F_contig15647.3262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=939bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15647:1..939- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCATCCGCCATCGCGCCGCCGGACTGGCGACGGAATGGCTGGGGCGGCG CACTGAACTAGAGATCCAACAGACCTTGCGGCGCGAGGTAGAACAGGAGC GGTGGACGAGCCTGGATCGCACGCTGCAGCGAGAGGCTGGCGATGACCAC CGGGTGCAGATCGAACGCTTTATCGACCCGACGTTGCAACGTCAGAGGCA ACTGCTCATTGGCCGCTTGCAACACTTGCAGCGCCTGGGCTTGGCGGACG AGATACAGCCCGGTACATGGGACATTCACGCCGATGCTGAGAAGACATTG CGTGCCCTGGGTGAACGTGGCGATATCATCCGCACCCTGCAAAGGTCCAT GAGCGGCCTTTCACGAGAACTGACCGTCTTTGAACCGGGTGAGAGCGGAC GCAGTGTCATCGGGCGTGTGGCTGGTAAAGGGCTCGCCGATGAACTGCAC GACCGGGGTTATTTGGTGATTGACGGCGTGGATGGCAAGGCCCATTACAT TTCACTCAACGCCCGTGACGAGTTGACGAACTATCCCACCGGGGCCGTGG TGGAAGTGCGCGGTTCTGCTGAACTACGTGCGGCCGACCGCAACATCGCG GAACTGGCAAGCGATGGCCTTTACCGCACAGACCATCACCTAGTCATCGA ACAAGGCCGGACCAAGGTTGGGTGCGACCCGCAAGAAATCGTCGCAGCCC ATGTTCGTCGCCTGGAAGCGTTACGTCGTGTGGGCATTGTGGAACGCGTG GCCGAGGGGCTATGGAAGGTGCCGGGCGACCTGCCTGAGCGTGGGCGTCA GTACGATACTCAGCGCCTGGGCGGGGTGGCGGTGGAGCTGAAATCGCACC TGCCCATCGAACGTCAGTCGCGCGTGATCGGCGCTACTTGGCTTGACCAG CAACTAATCGGCGGTGGTCGAGGATTCAGTGACATAGGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15647:1..939-

>mRNA_E-siliculosus-1a_F_contig15647.3262.1 ID=mRNA_E-siliculosus-1a_F_contig15647.3262.1|Name=mRNA_E-siliculosus-1a_F_contig15647.3262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1878bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15647:1..939- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCATCCGCCATCGCGCCGCCGGACTGGCGACGGAATGGCTGGGGCGGCG
CACTGAACTAGAGATCCAACAGACCTTGCGGCGCGAGGTAGAACAGGAGC
GGTGGACGAGCCTGGATCGCACGCTGCAGCGAGAGGCTGGCGATGACCAC
CGGGTGCAGATCGAACGCTTTATCGACCCGACGTTGCAACGTCAGAGGCA
ACTGCTCATTGGCCGCTTGCAACACTTGCAGCGCCTGGGCTTGGCGGACG
AGATACAGCCCGGTACATGGGACATTCACGCCGATGCTGAGAAGACATTG
CGTGCCCTGGGTGAACGTGGCGATATCATCCGCACCCTGCAAAGGTCCAT
GAGCGGCCTTTCACGAGAACTGACCGTCTTTGAACCGGGTGAGAGCGGAC
GCAGTGTCATCGGGCGTGTGGCTGGTAAAGGGCTCGCCGATGAACTGCAC
GACCGGGGTTATTTGGTGATTGACGGCGTGGATGGCAAGGCCCATTACAT
TTCACTCAACGCCCGTGACGAGTTGACGAACTATCCCACCGGGGCCGTGG
TGGAAGTGCGCGGTTCTGCTGAACTACGTGCGGCCGACCGCAACATCGCG
GAACTGGCAAGCGATGGCCTTTACCGCACAGACCATCACCTAGTCATCGA
ACAAGGCCGGACCAAGGTTGGGTGCGACCCGCAAGAAATCGTCGCAGCCC
ATGTTCGTCGCCTGGAAGCGTTACGTCGTGTGGGCATTGTGGAACGCGTG
GCCGAGGGGCTATGGAAGGTGCCGGGCGACCTGCCTGAGCGTGGGCGTCA
GTACGATACTCAGCGCCTGGGCGGGGTGGCGGTGGAGCTGAAATCGCACC
TGCCCATCGAACGTCAGTCGCGCGTGATCGGCGCTACTTGGCTTGACCAG
CAACTAATCGGCGGTGGTCGAGGATTCAGTGACATAGGCGGCATCCGCCA
TCGCGCCGCCGGACTGGCGACGGAATGGCTGGGGCGGCGCACTGAACTAG
AGATCCAACAGACCTTGCGGCGCGAGGTAGAACAGGAGCGGTGGACGAGC
CTGGATCGCACGCTGCAGCGAGAGGCTGGCGATGACCACCGGGTGCAGAT
CGAACGCTTTATCGACCCGACGTTGCAACGTCAGAGGCAACTGCTCATTG
GCCGCTTGCAACACTTGCAGCGCCTGGGCTTGGCGGACGAGATACAGCCC
GGTACATGGGACATTCACGCCGATGCTGAGAAGACATTGCGTGCCCTGGG
TGAACGTGGCGATATCATCCGCACCCTGCAAAGGTCCATGAGCGGCCTTT
CACGAGAACTGACCGTCTTTGAACCGGGTGAGAGCGGACGCAGTGTCATC
GGGCGTGTGGCTGGTAAAGGGCTCGCCGATGAACTGCACGACCGGGGTTA
TTTGGTGATTGACGGCGTGGATGGCAAGGCCCATTACATTTCACTCAACG
CCCGTGACGAGTTGACGAACTATCCCACCGGGGCCGTGGTGGAAGTGCGC
GGTTCTGCTGAACTACGTGCGGCCGACCGCAACATCGCGGAACTGGCAAG
CGATGGCCTTTACCGCACAGACCATCACCTAGTCATCGAACAAGGCCGGA
CCAAGGTTGGGTGCGACCCGCAAGAAATCGTCGCAGCCCATGTTCGTCGC
CTGGAAGCGTTACGTCGTGTGGGCATTGTGGAACGCGTGGCCGAGGGGCT
ATGGAAGGTGCCGGGCGACCTGCCTGAGCGTGGGCGTCAGTACGATACTC
AGCGCCTGGGCGGGGTGGCGGTGGAGCTGAAATCGCACCTGCCCATCGAA
CGTCAGTCGCGCGTGATCGGCGCTACTTGGCTTGACCAGCAACTAATCGG
CGGTGGTCGAGGATTCAGTGACATAGGC
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