mRNA_E-siliculosus-1a_F_contig1043.323.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1043.323.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1043.323.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: A0A6H5KLU3_9PHAE (Presenilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU3_9PHAE)

HSP 1 Score: 827 bits (2137), Expect = 2.470e-291
Identity = 554/602 (92.03%), Postives = 556/602 (92.36%), Query Frame = 1

Query:  328 MASTTEPMEDGDAGVGAAEEARAPLLEEGHGTLQPSHLRRTAQQGSPDENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXPQEGDAYSSPRAPVGTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRPGKGGAGASESVAAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAAPAAAASGDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQSPRAGGRSRXXXXXXXXXXXXXXXXXXMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLYF 2133
            MASTTEPMED DAG+GAAEEARAPLLEEGHGTLQP H RRTA QG+PDENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTT LDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXX  PQEGD YSSPR PVGTAT          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RRPG GGAGASESVAAPLLELVES TAAVAVGDASADGSGT S RGQV SPRARGAAAPAAA SGDL S AAVSP         QRFGGAS EGDALIQSPR      XXXXXXXXXXXXXXXXX MGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLYF
Sbjct:    1 MASTTEPMEDSDAGLGAAEEARAPLLEEGHGTLQPPHGRRTAHQGNPDENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTNLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXGGPQEGDPYSSPRTPVGTATVGGGLADLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPGAGGAGASESVAAPLLELVESGTAAVAVGDASADGSGTTSDRGQVRSPRARGAAAPAAA-SGDLDSCAAVSPXXXXXXXXXQRFGGASAEGDALIQSPRXX-XXXXXXXXXXXXXXXXXXXXEMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLYF 600

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: D8LTV7_ECTSI (Presenilin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV7_ECTSI)

HSP 1 Score: 756 bits (1952), Expect = 1.290e-263
Identity = 518/610 (84.92%), Postives = 526/610 (86.23%), Query Frame = 1

Query:  328 MASTTEPMEDGDAGVGAAEEARAPLLEEGHGTLQPSHLRRTAQQGSPDENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXPQEGDAYSSPRAPVGTAT-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRPGKGGAGASESVAAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAAPAAAASGDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQ-------SPRAGGRSRXXXXXXXXXXXXXXXXXXMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLYF 2133
            MAST EP+ED DAGVGAAEEARAPLLEEGHGTLQP H RRTAQQG+PDENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXX       PQEGD  SSPRAPVGTAT G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      SARRPG   AGASESVAAPLLELVES TAAVAVGDASADGSGTRSGR Q       G    A    G  G G     PP          G  +V+ +  ++       S RA           XXXXXXXXXXXX GVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALN+TPLYF
Sbjct:    1 MASTAEPIEDSDAGVGAAEEARAPLLEEGHGTLQPPHRRRTAQQGNPDENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXQPGATGGPQEGDVSSSPRAPVGTATMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGDHSSARRPGADSAGASESVAAPLLELVESGTAAVAVGDASADGSGTRSGREQ-------GKRRLATVRRGIRGGGCLDPEPP----------GWRTVQAEKKLELFSPVPTSSRA-----------XXXXXXXXXXXXXGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNETPLYF 582

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: W7TKB5_9STRA (Presenilin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKB5_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.680e-100
Identity = 243/548 (44.34%), Postives = 286/548 (52.19%), Query Frame = 1

Query:  496 LDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTTL--DPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXPQEGDAYSSPRAPVGTAT-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRPGKGGAGASESVAAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAAPAAAASGDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQSPRAGGRSRXXXXXXXXXXXXXXXXXXMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLY 2130
            LD  DV YSANSF AV+KPV L M L++ + V++    E   +  +SVY + D        D +SV+LGKS VNAL IV V+  ATFV+V +Y  RCM+CL GYMA+SS +LLG+MGG +W  AL  + LPCD FT+  VL+NFA VGVVAIFYQKGIPT VTQ YLV  S+IMAWQLSRFEEWTGW LLVVLALYDLCAVLTPCGPL+ LV LMQEY EPMPGLLYEAELP                                  G A    R P  TA  G                                                 +  P         S   PLL+  +S               GT  G+     P +R     + +  G+      +  P   GN      GG S  G+         GR                       SIKLGLGDFVFYSVLV KAALYGF   AAC +VI+ GLGATLVLL+V+R ALPALPISIG G +FYLLTR +I PY++AL  TP+Y
Sbjct:   44 LDIEDVLYSANSFWAVLKPVALTMFLASLVVVNVAFATE---DQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELP----------------------------------GHARHHHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSP--------PSPLDPLLDGTQSSPG------------GTHLGQHHPPHP-SRSLRRVSRSQGGETLLEDGMGSPVEGGN----EHGGESERGER-----GESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIY 524

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: A0A7S2XWZ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWZ8_9STRA)

HSP 1 Score: 328 bits (841), Expect = 1.930e-99
Identity = 233/542 (42.99%), Postives = 283/542 (52.21%), Query Frame = 1

Query:  508 DVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATN-SALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXPQEGDAYSSPRAPVGTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRPGKGGAGASESVAAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAAPAAAASGDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQSPRAGGRSRXXXXXXXXXXXXXXXXXXMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLY 2130
            ++ YS NSFMAVVKPV + M L++++ V++ ++   +   S LS YEVYD S  + D  SVRLGKS +NAL IVLVLA ATF IV +Y  RCM+CL+GYM  SS +LLG+MGG V   AL+ + +  D +TYY +L+NF++VGV+AIFYQ+GIP VVTQ YLV TS+IMAWQL+RFEEWTGW LLVVLA YDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAEL                                          R+  G+                                                   +  RP   GAG  +   A               G+ S DGS      G +   +  G A P +           V+ PP    AA   +     + D ++   R                           SIKLGLGDFVFYSVLVSKAAL+GF   A C + I  GLGATLVLL+VY+MALPALPISI  G   YLLTR  + PYVE L   P+Y
Sbjct:   12 EMVYSVNSFMAVVKPVMITMLLASYVVVNVSTEESRSQQMSGLSAYEVYDTSDES-DSDSVRLGKSVINALTIVLVLAGATFAIVLLYKFRCMKCLIGYMMFSSVMLLGIMGGMVLWTALDKWNVVMDEYTYYFILYNFSMVGVIAIFYQQGIPMVVTQGYLVLTSVIMAWQLARFEEWTGWSLLVVLAFYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAEL------------------------------------------RSETGSNVSPTPRGGRKSYQRDSESGLESASIGPDSAGRVGVETEETHLLPQSSGETAPERPRVRGAGRKQEGEA---------------GNGSPDGSS-----GDI---QQNGGAPPGS-----------VNHPPGPQAAAPAAYVVDPGDEDLVVYQER---------------------------SIKLGLGDFVFYSVLVSKAALFGFLTCATCFLAITAGLGATLVLLSVYKMALPALPISIFLGVTCYLLTRVLLIPYVENLAAVPIY 449

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: A0A7S2F2R2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2R2_9STRA)

HSP 1 Score: 289 bits (739), Expect = 7.760e-86
Identity = 212/522 (40.61%), Postives = 260/522 (49.81%), Query Frame = 1

Query:  565 MTLSAFITVSLYSDAEGATNSALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXPQEGDAYSSPRAPVGTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRPGKGGAGASESVAAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAAPAAAASGDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQSPRAGGRSRXXXXXXXXXXXXXXXXXXMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLY 2130
            M L++   V+L  +    +  A +VY V DES    D ++V+LGKS VNALIIV VLAAATF IV +Y  RCM+ L+GYM +SS +LLG+MG  +   ALE++Q+PCDA T+Y + +NFAVVGV++IF++KGIP  +TQ YLV TS++MAWQLS FEEWTGWCLLV LALYDLCAVLTPCGPLKALV LMQEY EPMPGLLYEAELP+                                  D  +    P  T+                                                           + +S      L +    DTA V        G+G  +G    S                       V  P                E  A  ++ R                           SIKLGLGDFVFYSVLVSKAALY F   A C +VI+ GLGATLVLL+V++ ALPALPISIG G  F+ LTRF I P++EAL  TP+Y
Sbjct:    1 MLLASLAVVALQEETGEESLDAYTVYNVGDESG---DTNTVKLGKSIVNALIIVCVLAAATFGIVCLYKYRCMKLLIGYMMLSSMMLLGLMGSLMLWTALELWQVPCDAITFYFIAYNFAVVGVISIFWKKGIPMQITQFYLVCTSVLMAWQLSHFEEWTGWCLLVALALYDLCAVLTPCGPLKALVTLMQEYNEPMPGLLYEAELPSE---------------------------------DNGTPTVIPPATSLNQ--------------------------------------------------------SASSAQEMRSLGQQQRQDTAVV-------QGAGVENGTAPTS-----------------------VHTPTEE------------TEIQAFGEADR---------------------------SIKLGLGDFVFYSVLVSKAALYDFATCAICFLVILSGLGATLVLLSVFQKALPALPISIGLGVSFFFLTRFLIVPFIEALAGTPIY 361

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: A0A835ZDC4_9STRA (Presenilin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDC4_9STRA)

HSP 1 Score: 262 bits (669), Expect = 3.990e-75
Identity = 224/510 (43.92%), Postives = 261/510 (51.18%), Query Frame = 1

Query:  679 SSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAA------------------------ALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELP--AGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXPQEGDAYSSPRAPVGTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRPGKGGAGASESVAAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAAPAAAASGDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQSPRAGGRSRXXXXXXXXXXXXXXXXXXMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLY 2130
            SS  LGKS VN+L+IV VLA AT +IV +Y  RCMRCL+GYM +SS  LLG+MGG V+                          AL+++Q+P D FT+   LWNFA VGV+AIFYQKG+PTVVTQAYLVATS+IMAWQLSRF+EWTGW LLVVLA+YDLCAVL+PCGPLKALVNLMQEY EPMPGLLYEAELP        XXXXXXXXXXXX             PQ+ D                                                                      G G     +A +L L E                      G   +PR            GD G G                       GDA           R   XXXXXXXXXXXXXX    +IKLGLGDFVFYSVLVSKA LY FTA+ +C+  ++ GL ATLVLL++++ ALPALPISI  G   Y +TRF++QP +  L    LY
Sbjct:   35 SSALLGKSLVNSLVIVAVLAVATTLIVLLYKFRCMRCLLGYMMLSSVSLLGLMGGLVFLTMCCSFGTRDTRALHALLRATPCVQALDMWQIPMDMFTFIMCLWNFAAVGVIAIFYQKGLPTVVTQAYLVATSVIMAWQLSRFDEWTGWALLVVLAMYDLCAVLSPCGPLKALVNLMQEYNEPMPGLLYEAELPRPVAARAAXXXXXXXXXXXXGASSAGARLASEDPQDYDV---------------------------------------------------------------------GPGVGLMASAVVLMLNE---------------------EGAAEAPRQ----------GGDSGGG---------------------TGGDA----------HRRESXXXXXXXXXXXXXXEEERNIKLGLGDFVFYSVLVSKAGLYSFTAFVSCLCAVLCGLMATLVLLSLHKAALPALPISIALGVATYFVTRFAMQPALVHLGSQGLY 413

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: A0A7S4DGE7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGE7_HETAK)

HSP 1 Score: 248 bits (632), Expect = 5.680e-72
Identity = 134/208 (64.42%), Postives = 165/208 (79.33%), Query Frame = 1

Query:  496 LDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKA 1119
            LD  +V Y+ NSFMAV+KPVT+ M L++  TV + SD+   T+S+LS YEVYD S+     +SVRLG+S VNAL++V VLAAATF IV +Y  RCM+CLVGYM  SS +LLG MGG V    L+ +++P D +T+  +++NF VVGV++IFYQKGIPT VTQ+YLVATSIIMAWQLSRFE+WTGW LLVVLALYDLCAVLTPCGPLKA
Sbjct:   50 LDLEEVTYAINSFMAVLKPVTVTMVLASIATVYVQSDSID-TSSSLSAYEVYDTSSAAGTSASVRLGESIVNALVVVCVLAAATFGIVLLYKYRCMKCLVGYMMCSSVMLLGAMGGMVLWTLLQKWEVPFDQYTFLFIVYNFGVVGVISIFYQKGIPTGVTQSYLVATSIIMAWQLSRFEDWTGWSLLVVLALYDLCAVLTPCGPLKA 256

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: A0A1Z5KQA4_FISSO (Presenilin n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQA4_FISSO)

HSP 1 Score: 251 bits (641), Expect = 1.180e-69
Identity = 199/554 (35.92%), Postives = 267/554 (48.19%), Query Frame = 1

Query:  508 DVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDA-----EGATNSALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEP-MPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXX---PQEGDAYSSPRAPVGTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRPGKGGAGASESVAAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAAPAAAASGDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQSPRAGGRSRXXXXXXXXXXXXXXXXXXMGV----SIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLY 2130
            ++ YS++S+ A+ KPVTL M LSA   V +  DA     E A  +A   + V D   +    S   L  S  NALIIV V+   TF+IV +Y M+ M+CL+GYM   S  LLG++GG V   A++VY +P D  T+Y  ++NF +VGV+A+F+ +GIPT VTQ YLVATS+I+AW LS F++WT W LL++LALYDLCAVLTPCGPLK LV  M +   P MPGLL+EAELP    R                             P +G +  SPR  +  A                                                  S   P +    +S+++      L  SD+  +   + +A+                             L +   V  P   G     +  G  V     ++  R G   R                         SI+LGLGDF+FYSVLV+KAA Y F  +AAC++VI+ GLG TLVLL+VY  ALPALPISI  G VFY+LTR+ I+P+VEA+ + P Y
Sbjct:   66 ELIYSSSSYYAIAKPVTLTMVLSALAVVLINDDATKQGNEAAMANAYQYFSVNDAGQS----SGQNLAHSLANALIIVSVICGMTFMIVVLYRMKFMKCLIGYMIFCSGTLLGMLGGNVLQTAVQVYNIPVDKGTFYLFVYNFCIVGVLAVFFGQGIPTSVTQGYLVATSVILAWHLSFFDDWTAWTLLLMLALYDLCAVLTPCGPLKFLVEAMSQEGSPEMPGLLFEAELPPEAKRPVGSSRGRANIAASASDVERSAPPNPVSQPMDGSS-ESPRVKIPLAIAKVYQLPVVSIPSSSM---------------------------------SIMFPDR----SSDTIGTTSPLLTNSDSTVILPENPTAE----------------------------QLLAKVVVRLPAHGGRLEHVQRRGKKV----YLERDRHGVPKRYLWVDRNGKVFAEMKDGDEEKPEKNSIRLGLGDFIFYSVLVAKAAQYSFATFAACILVILAGLGGTLVLLSVYHHALPALPISIFMGIVFYVLTRWFIEPWVEAVLEKPYY 545

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: A0A7S1G978_9STRA (Presenilin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G978_9STRA)

HSP 1 Score: 247 bits (630), Expect = 4.660e-69
Identity = 197/544 (36.21%), Postives = 260/544 (47.79%), Query Frame = 1

Query:  484 DDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSA-LSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXPQEGDAYSSPRAPVGTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRPGKGGAGASESVAAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAAPAAAASGDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQSPRAGGRSRXXXXXXXXXXXXXXXXXXMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEAL 2112
            D  A D  D +Y+A    AV+KPV + M L++++  ++   ++ A  +A LSVY VY ES +    +  ++G+S VNAL+IV V+   TF++V  Y  RC++ ++GY+  +SA LLG  GG V + A  VY +  D  T+  ++WNFA+VGVVA+FYQKGIP  VTQ+YLVA S+IM+W +++F EWTGW LL+ LALYDLCAVL+PCGPLKALV L QE ++P+PGL+YEA++                                 +  D  S P  P                                                       AR  G G  G + SV     EL      A A G+A A    TR             AA  A                       + R   AS E          GG  R                     SIKLGLGDFVFYSVLV KAAL+  T  +AC V ++ GL  TL LL V++ ALPALPISI FG VFY + RF++ PY+  L
Sbjct:   31 DPHAEDGEDPSYTARHLAAVLKPVAITMLLASWVVANIREASQDAAIAAGLSVYMVYTESGSGNQSTGEKVGQSLVNALVIVSVICVVTFILVLCYKYRCLKLMIGYLMFASASLLGYSGGFVVSTAFLVYDVRIDWITFAFIMWNFAIVGVVAVFYQKGIPRAVTQSYLVAVSVIMSWIVTKFPEWTGWALLIALALYDLCAVLSPCGPLKALVKLAQERQDPIPGLVYEADV------------------------AEDSSDRVDRVRDTLSRPSGP------------------------------------------------------GARSGGGGTDGEAASVRDVSAELPARGVDAEA-GEARATAEETR-------------AAGTAXXXXXXXXXXXXXXXXXXXXXXXAPRPRAASYE--------HQGGEDR---------------------SIKLGLGDFVFYSVLVGKAALFDLTTLSACFVGVLMGLVGTLFLLGVFKKALPALPISILFGVVFYAVGRFALVPYMVEL 453

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BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Match: A0A448Z5G0_9STRA (Presenilin n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5G0_9STRA)

HSP 1 Score: 241 bits (616), Expect = 6.880e-66
Identity = 212/606 (34.98%), Postives = 288/606 (47.52%), Query Frame = 1

Query:  382 EEARAPLLEEGHGTLQPSHLRRTAQQG--SPDENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSD---AEGATNSALSVYEVYDES-TTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEP-MPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXPQEGDAYSSPRAPVGTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRPGKGGAGASESVAAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAA------PAAAASGDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQSPRAGGRSRXXXXXXXXXXXXXXXXXXMGV----------SIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLY 2130
            +E R PL    H  ++   + R   +G  + D++  ++  +   ++ YS++SF A+V PV++ M LSA   V + S+   A+GA + A + Y+ +D S  + LD     +  S +N LI+V  +   TFVIV +Y   CM  L+GYM  +S  LLG +GG +W  A+++Y LP D FTY  VLWNFA VG++AIFY KG+P  ++QAYLV TS+I+AW LS F++   W LL +LALYDLCAVLTPCGPLKALVNLM + + P MPGLLYEAELP   P                      XXXXX        S RA   T                                                             G    V  PL      + + + V + S     T S       P   G+        P   +   L +   V  P   G     R  G +V     ++  R G   R                   G           SI+LGLGDF+FYSVLV+KAA Y FT +  C++VI+ GLG TL+LL+V+  ALPALPISI  G  FY++TRF I+P++E +   P Y
Sbjct:   42 DEERVPLSPS-HAIVRHPEIFRDEPEGGDATDDSSYEEREMSLQELLYSSSSFYAIVVPVSITMVLSALAVVFINSESIMAQGAASMA-ATYQYFDTSGASALD----AILLSLLNGLIMVTXIGGFTFVIVLLYKFNCMWLLIGYMMFASTSLLGFLGGHLWLVAIQLYDLPVDKFTYIMVLWNFAAVGILAIFYGKGVPKYISQAYLVLTSVILAWHLSFFDDVMAWSLLFMLALYDLCAVLTPCGPLKALVNLMSKDDAPEMPGLLYEAELP---PEARRPGSSSTSQNYAGVNSSRSXXXXXXXXXXVSESSRATSAT-------------------------------------------------------------GGELRVELPLAVAQVYNLSVLDVPEQSRGLFSTSSSSNGSDQPLLDGSIENQNFEIPENPSKKQLKADIIVELPVNGGRIERIRRKGKTV----FMERNRHGDPKRILWVDRKGRVFAESSSYGEGDDDEEEDLGRNSIRLGLGDFIFYSVLVAKAAEYSFTTFMVCMLVILAGLGGTLILLSVFHHALPALPISICLGIFFYIVTRFLIEPWIEGIMIKPYY 573

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1043.323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KLU3_9PHAE	2.470e-291	92.03	Presenilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax...	[more]
D8LTV7_ECTSI	1.290e-263	84.92	Presenilin n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
W7TKB5_9STRA	1.680e-100	44.34	Presenilin-like protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A7S2XWZ8_9STRA	1.930e-99	42.99	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2F2R2_9STRA	7.760e-86	40.61	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A835ZDC4_9STRA	3.990e-75	43.92	Presenilin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A7S4DGE7_HETAK	5.680e-72	64.42	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A1Z5KQA4_FISSO	1.180e-69	35.92	Presenilin n=1 Tax=Fistulifera solaris TaxID=15195...	[more]
A0A7S1G978_9STRA	4.660e-69	36.21	Presenilin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1...	[more]
A0A448Z5G0_9STRA	6.880e-66	34.98	Presenilin n=1 Tax=Pseudo-nitzschia multistriata T...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1043	contig	E-siliculosus-1a_F_contig1043:12098..21192 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1809
Model size	2824
Exons	10
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko00001,ko00002,ko01000,ko01002
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	O
EggNOG OGs	KOG2736@1,KOG2736@2759
EggNOG free text desc.	subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors
GOs	GO:0000003,GO:0000041,GO:0000045,GO:0000122,GO:0000186,GO:0000323,GO:0000775,GO:0000776,GO:0001501,GO:0001505,GO:0001568,GO:0001654,GO:0001666,GO:0001708,GO:0001754,GO:0001756,GO:0001764,GO:0001773,GO:0001775,GO:0001919,GO:0001921,GO:0001932,GO:0001933,GO:0001934,GO:0001942,GO:0001944,GO:0001945,GO:0001946,GO:0001947,GO:0002009,GO:0002027,GO:0002036,GO:0002038,GO:0002119,GO:0002164,GO:0002244,GO:0002252,GO:0002253,GO:0002263,GO:0002265,GO:0002274,GO:0002275,GO:0002283,GO:0002285,GO:0002286,GO:0002366,GO:0002376,GO:0002429,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003143,GO:0003407,GO:0003674,GO:0003824,GO:0004175,GO:0004190,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005640,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005790,GO:0005791,GO:0005794,GO:0005798,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0005929,GO:0005938,GO:0006355,GO:0006357,GO:0006464,GO:0006469,GO:0006486,GO:0006508,GO:0006509,GO:0006518,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006825,GO:0006836,GO:0006839,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006897,GO:0006903,GO:0006909,GO:0006914,GO:0006915,GO:0006928,GO:0006936,GO:0006941,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007033,GO:0007154,GO:0007155,GO:0007165,GO:0007166,GO:0007175,GO:0007176,GO:0007219,GO:0007220,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007447,GO:0007450,GO:0007507,GO:0007548,GO:0007568,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007614,GO:0007626,GO:0008013,GO:0008015,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008283,GO:0008284,GO:0008306,GO:0008324,GO:0008406,GO:0008544,GO:0008593,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009266,GO:0009581,GO:0009582,GO:0009605,GO:0009628,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009799,GO:0009855,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009952,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010001,GO:0010033,GO:0010243,GO:0010453,GO:0010467,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010942,GO:0010958,GO:0010975,GO:0010976,GO:0010977,GO:0012501,GO:0012505,GO:0012506,GO:0014002,GO:0015031,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0015630,GO:0015677,GO:0015695,GO:0015696,GO:0015833,GO:0015871,GO:0016020,GO:0016021,GO:0016043,GO:0016048,GO:0016055,GO:0016079,GO:0016080,GO:0016192,GO:0016234,GO:0016235,GO:0016236,GO:0016324,GO:0016477,GO:0016485,GO:0016787,GO:0017015,GO:0017156,GO:0018991,GO:0019098,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019866,GO:0019867,GO:0019904,GO:0021532,GO:0021537,GO:0021543,GO:0021782,GO:0021795,GO:0021870,GO:0021885,GO:0021895,GO:0021904,GO:0021915,GO:0021953,GO:0021987,GO:0022008,GO:0022029,GO:0022404,GO:0022405,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0023061,GO:0030001,GO:0030003,GO:0030016,GO:0030017,GO:0030018,GO:0030030,GO:0030054,GO:0030097,GO:0030099,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030165,GO:0030182,GO:0030318,GO:0030323,GO:0030324,GO:0030326,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030587,GO:0030659,GO:0030667,GO:0030900,GO:0031090,GO:0031149,GO:0031150,GO:0031154,GO:0031224,GO:0031226,GO:0031293,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0031344,GO:0031345,GO:0031346,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031594,GO:0031674,GO:0031965,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0032091,GO:0032092,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032469,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032890,GO:0032892,GO:0032940,GO:0032991,GO:0033036,GO:0033157,GO:0033158,GO:0033160,GO:0033267,GO:0033554,GO:0033619,GO:0033673,GO:0033674,GO:0034205,GO:0034220,GO:0034641,GO:0034645,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035220,GO:0035222,GO:0035239,GO:0035253,GO:0035282,GO:0035295,GO:0035333,GO:0035577,GO:0036064,GO:0036211,GO:0036230,GO:0036269,GO:0036293,GO:0036303,GO:0036477,GO:0040011,GO:0040028,GO:0042058,GO:0042059,GO:0042063,GO:0042110,GO:0042119,GO:0042127,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042303,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042327,GO:0042391,GO:0042461,GO:0042462,GO:0042500,GO:0042582,GO:0042592,GO:0042633,GO:0042659,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0042982,GO:0042987,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043011,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043086,GO:0043170,GO:0043198,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043270,GO:0043292,GO:0043299,GO:0043312,GO:0043392,GO:0043393,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043413,GO:0043473,GO:0043523,GO:0043524,GO:0043549,GO:0043588,GO:0043589,GO:0043603,GO:0043949,GO:0044057,GO:0044070,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044437,GO:0044441,GO:0044444,GO:0044446,GO:0044449,GO:0044459,GO:0044463,GO:0044464,GO:0044671,GO:0045055,GO:0045121,GO:0045137,GO:0045165,GO:0045176,GO:0045177,GO:0045184,GO:0045202,GO:0045296,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045732,GO:0045747,GO:0045859,GO:0045860,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0046530,GO:0046649,GO:0046822,GO:0046824,GO:0046873,GO:0046903,GO:0046907,GO:0046983,GO:0048066,GO:0048143,GO:0048167,GO:0048190,GO:0048286,GO:0048468,GO:0048471,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048538,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048580,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048708,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048837,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050435,GO:0050673,GO:0050730,GO:0050732,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050771,GO:0050773,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050804,GO:0050806,GO:0050808,GO:0050818,GO:0050820,GO:0050839,GO:0050851,GO:0050852,GO:0050877,GO:0050890,GO:0050896,GO:0050931,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051336,GO:0051338,GO:0051340,GO:0051347,GO:0051348,GO:0051352,GO:0051402,GO:0051438,GO:0051444,GO:0051563,GO:0051580,GO:0051582,GO:0051588,GO:0051590,GO:0051604,GO:0051606,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051952,GO:0051954,GO:0051955,GO:0051957,GO:0051960,GO:0051961,GO:0051962,GO:0051966,GO:0052547,GO:0052548,GO:0055037,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060041,GO:0060047,GO:0060048,GO:0060070,GO:0060075,GO:0060173,GO:0060249,GO:0060255,GO:0060284,GO:0060291,GO:0060322,GO:0060341,GO:0060429,GO:0060541,GO:0060548,GO:0060562,GO:0060828,GO:0060998,GO:0060999,GO:0061053,GO:0061062,GO:0061097,GO:0061099,GO:0061136,GO:0061371,GO:0061458,GO:0061900,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070001,GO:0070011,GO:0070050,GO:0070085,GO:0070201,GO:0070482,GO:0070588,GO:0070765,GO:0070838,GO:0070887,GO:0070925,GO:0070997,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0080090,GO:0090087,GO:0090092,GO:0090287,GO:0090316,GO:0090596,GO:0090647,GO:0090702,GO:0097028,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098609,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098687,GO:0098771,GO:0098773,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098857,GO:0098916,GO:0099003,GO:0099080,GO:0099081,GO:0099120,GO:0099177,GO:0099503,GO:0099504,GO:0099512,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0106027,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0140029,GO:0140096,GO:0150034,GO:0198738,GO:1900006,GO:1900180,GO:1900182,GO:1901135,GO:1901137,GO:1901184,GO:1901185,GO:1901214,GO:1901215,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901800,GO:1902041,GO:1902042,GO:1902043,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902903,GO:1902905,GO:1903050,GO:1903051,GO:1903052,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903364,GO:1903506,GO:1903507,GO:1903508,GO:1903522,GO:1903789,GO:1903793,GO:1903827,GO:1903829,GO:1903844,GO:1903959,GO:1903961,GO:1904589,GO:1904591,GO:1904645,GO:1904646,GO:1904796,GO:1904797,GO:1904951,GO:1905037,GO:1905114,GO:1905906,GO:1905908,GO:1990535,GO:2000026,GO:2000058,GO:2000059,GO:2000060,GO:2000112,GO:2000113,GO:2000272,GO:2000677,GO:2000678,GO:2001023,GO:2001025,GO:2001141,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001237,GO:2001238
KEGG Module	M00682
KEGG Pathway	ko04310,ko04330,ko04722,ko05010,ko05165,map04310,map04330,map04722,map05010,map05165
KEGG ko	ko:K04505,ko:K04522,ko:K06060
Preferred name	PSEN1
Seed eggNOG ortholog	2880.D8LTV7
Seed ortholog evalue	1.3e-217
Seed ortholog score	762.7
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1043.323.1	prot_E-siliculosus-1a_F_contig1043.323.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1043 12425..20504 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927545.8794472-UTR-E-siliculosus-1a_F_contig1043:12097..12424	1622927545.8794472-UTR-E-siliculosus-1a_F_contig1043:12097..12424	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1043 12098..12424 +
1696318578.1528354-UTR-E-siliculosus-1a_F_contig1043:12097..12424	1696318578.1528354-UTR-E-siliculosus-1a_F_contig1043:12097..12424	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1043 12098..12424 +
1622927546.0079865-UTR-E-siliculosus-1a_F_contig1043:20504..21192	1622927546.0079865-UTR-E-siliculosus-1a_F_contig1043:20504..21192	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1043 20505..21192 +
1696318578.3318753-UTR-E-siliculosus-1a_F_contig1043:20504..21192	1696318578.3318753-UTR-E-siliculosus-1a_F_contig1043:20504..21192	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1043 20505..21192 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1043:12098..21192+
coding sequence from alignment at E-siliculosus-1a_F_contig1043:12098..21192+

protein sequence of mRNA_E-siliculosus-1a_F_contig1043.323.1

>prot_E-siliculosus-1a_F_contig1043.323.1 ID=prot_E-siliculosus-1a_F_contig1043.323.1|Name=mRNA_E-siliculosus-1a_F_contig1043.323.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=603bp
MASTTEPMEDGDAGVGAAEEARAPLLEEGHGTLQPSHLRRTAQQGSPDEN
GQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNS
ALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMR
CMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAV
VGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALY
DLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRRRRPENNRR
APSQQQARREQSGAAGGPQEGDAYSSPRAPVGTATGGGGLAGLAGGGDEE
GGRGTDDATPAASASTEAAAVVVPQSSSPGGDHSSARRPGKGGAGASESV
AAPLLELVESDTAAVAVGDASADGSGTRSGRGQVSSPRARGAAAPAAAAS
GDLGSGAAVSPPPRRGNAASQRFGGASVEGDALIQSPRAGGRSRRRRRAA
AAAENDEDEEEEMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIV
FGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPL
YF*

mRNA from alignment at E-siliculosus-1a_F_contig1043:12098..21192+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1043.323.1 ID=mRNA_E-siliculosus-1a_F_contig1043.323.1|Name=mRNA_E-siliculosus-1a_F_contig1043.323.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9095bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1043:12098..21192+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGAGCAGTGCCGAGGCAACAACAACGTGCACGACACAACACCTGGAAGG
AGGAAAGGAACACGGGTCGCGATGCAGCGGAAGTTGAAGCATCTCCAGTG
AAGAGCGCGTGTCTCCGGCCTGTGCGTGCAAAGCGTGGTGGGTGTTTCGA
TCCTAGGGCAGATCTACGGAGATCGATTGAAAGGTAAAATAAACGGCGGA
GGAACAGCAGCAGCAGCAGCAGCTTAGGGAACAGCAGCTGTGGGAACAGG
TACCAGTAGCACCCGGGAGGCGCCGCGAGAACGGTGCGTTGCCGTTGAAC
ACGCACACCAGGAGTAGTACTGCCGACATGGCATCGACCACCGAGCCGAT
GGAAGATGGTGACGCCGGCGTGGGTGCAGCGGAGGAGGCTCGAGCTCCCT
TGCTCGAGGAGGGGCATGGCACGCTGCAGCCGTCTCATCTCCGGCGGACT
GCTCAACAAGGTGAGGGATCATGCGCTGCATGCGATATCGATGACACCAC
GGATGCTGTAGACCTTGCATCGCGTGACATGACATGCATGCCGCTTTTAG
CTTTCCGTTGTAAACACGACAGCACTGGCACTAATGACGGCGGGGGCCTT
GCAAGATGCTCCTGGATATCGGCGTCCAAAATCAACCTGCCTTGGTATCT
AAGTCTACACGAGCAGGAATGCACAGCAGCAGCGGTGCCACGCCCTCCAT
AAATGAAGATTGCGAGCAGCCACACTTCACTCCCTTGCTTCAGAGGCAGC
AGCAGCGACCGCCCAAAGATTTATAGTTACAACAGTAGACCTCGTGCGTG
CCCGCTGCTGCTACGGTTGTAAACCTCGTTGGGTGCCCGCTGCTACTGCT
ACTGCTGCTGTGAAGCTCGTTGGGTAAACCGCTACTGCTGCTGCTGCTGT
ACATACCGCCGTCGCCGTAGGAAGCCCTGACGAGAACGGCCAGGACGACG
GCGCCTTGGACCAGGCGGACGTGGCTTACAGCGCCAACTCGTTCATGGCG
GTGGTCAAGCCGGTGACGCTATGCATGACCCTGTCCGCCTTCATCACGGT
GTCTCTGTACTCCGATGCCGAAGGGGCCACAAACAGGTAAGCTTATCTTT
GTTTTTTGTAAGCATCGACCACGCTTACCCGCTGACCAATGAAAAGACGT
CAGTCTCAGCGCGGTTGAAAACAGAAAATGGGTCTAATGTGTGAAATTGT
TGCCAGATTCGACCGCGCTAGCCGGCTTGTGTGCGTCGTTTATGTTGGCG
TCGACCGCGCTAATCGGCTGACCAATGAAAATGACGTCAATCTCAGCGCG
ACTTATAACAGAAAAAGCTTCTAAAGGCCATGATCTGGGACCCCGTGTTG
GGGCATCAGGTGTGTGTGCGTACCTGCTCGCCCAGGCAACCTTACCCGGC
GTATGCAGGGCTTGAATGCTTTCTTGCGCACCTGTGGGTCGGGCTTGTAG
CACTACTCAATGCCCCACGATCGACTCTACCCCCCCCGCCGCCGCCGCTG
CCTCCGTATCGACTCCCCCCTCAGCGCGTTGTCCGTGTACGAGGTGTACG
ACGAGTCGACTACAACCCTAGACCCTTCGTCGGTGCGTCTTGGCAAGAGT
TTCGTCAACGCCCTCATCATCGTGTTGGTGCTAGCAGGTACGATGCGATA
GGGCGTATGGGAGCGTTTTTCGGGGTCCGAGATTGAAGCAGTGTAGAAGC
GCTTCACAATGTCAAACCACAGGTCATGTGTTTGACCTCCCCCCCCGCCT
ATTTCCTACTTACCGTGGTCAGCGTGTGTTCTTGGAGGTGTTTCCTTCCC
CGACCCCACTAACTTTCTAACTTCGTCTCTCCTCTCTCTCGCTCTCTCTC
TCTCTCTCTCTCTCTCCCTTGCTGTCATGTCTCTGTCTGCTTGTCTGTCT
ATCTCTCAATTTATCTCTCTCGGTCCCTGCCCCCCCCCCCTCTCTCCTCT
CCTCCCCCCGCCTCACGCCTTGACCCCCCCCCCTTGCGGTTGCAGCTGCT
ACCTTCGTGATTGTGTGGATGTACTGGATGAGGTGCATGCGCTGCCTTGT
CGGATACATGGCGATGAGCTCGGCCGTCCTGCTGGGAGTAATGGGAGGCG
CGGTGTGGGCGGCGGCCCTGGAAGTGTATCAGCTCCCCTGCGACGCGTTC
ACGTACTACGGGGTGCTGTGGAACTTCGCGGTGGTAGGGGTCGTGGCCAT
ATTCTACCAGAAGGTGATGCTGCTGTCGTGGTTGGGCGTGGTTGGGTGGG
TTGTGGTGCCTGTACGTACCGCGTTCGTGCTATTTCGGTAGTCGGTGGCT
ATCTCCTGTGGTGTCTGACGGGCGTGCCGACGTTTTGTGTGTGTGTGTGC
GCGCGCGCGCGCGCGTGTCTTTCTTTGTTAGCATCGACCGCGCTAACCGG
CTGACCAAGGAAAAGACGGCAGTCTCAGTGCGGTGGAAAACACAAAATGT
TTCTATAGGCCACGATCTGGGACCCTGTGGCTGAGCGCCATGGGGGAGTC
TACGCTACTCTCCGGATTGAAGACAGATACCTTAGCAATACCAGAAGAGG
ACTGCACGTGTTTATCGTGGGTTTGTGTGTGTGGGTGTTTTGTTTTGTTT
TTCGGGATCTGTCGTGGTCTGCTTTACCTGACTACCAGCGTTCTAGTCTT
GTGTTGTTGGGTGATAGGGGTGGTACAGCGTGTATACCACAGTGAGTATG
TAGATGGGTCGGCGGTCGATTAACTTGCGGGCGTCTTGGTTTTGGAACCA
TACTCTGACGACAAACGTATAAGGAGGCCAACTCCGGTGTTGCCTCTCGG
CTGCTTGTCACGAGATTGTGTATGGCGATACGACGCTTTCTCCTCCCTCC
AGGGACCTTGATTTTACCGGAGACCTTGATTTTTCCCGCTGTCACGGACA
ATTTTTCATCGGCCAGCCCGTTAGCGCGGTTGATGCTACAGAGTACTATG
GACAGACACACACATAGAGGAGCACTTTGTCTCGTGGCACTGCTCGCCCT
CCCTGTAGCTTTTTCTCGTGCCTTTCGGCGCACGAGCGGTGTACTTCAAG
CAACGGACCAGCCTCTGAGTCGGTGCCTCTACGCTATGTACGAGGACGTG
TCTTCCTTTAGTCCGCGCTTAAACGGAGATGTGTGTCCAACTTCAACTAG
CGGAGGCGATCACCCAACGGGAGGCACGCAGTCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCNNNNNNNNNNCCGTTC
GCCCGCGCTTACACGGGGGTGTGGGTCCAATTTCCACTAGCGGGGGGGAT
CCCCCAACGGGGGGCACGCCGGCCCCCCCCCCCCCCCCCTGCTACGCAAT
CCCTTCCTCCTTCTGAAGCGCCCTCCCGACTCCCTGCCGTGCCTTTGGTG
CGCTTTGACTCTTGAACAGGGCATCCCGACGGTCGTGACGCAAGCCTACC
TGGTGGCCACCAGCATCATAATGGCTTGGCAGCTCAGGTGACATGTTTTC
GATCAGAAGCCTTGGCGAGGACATTGATCATTATGCTTGGTTTTAGTAGG
GTTAGGGATAGGGATAGGGATACGAACTCCCCCCTCTCTATTTCATGGTA
GATTAATTCTAAAATCTTCGCCAACGCGGTCCCAGAAGACATGACTCTAA
TTCATTTTTGGCCTTAAAGCGCTGGGGACATCTATATCTATTGTGCTTTG
AGCCATTTTGGTCGACCGCTAGTCCGTCTTCCCGTGTTATTTTGTCAAAT
ATATTGTGTCAAATGTCTTGTCTTTTGCTGTTTTTTTCTCTTGGTCCCGA
CAATGACAACGCGGCGTGCACCCTGCGGCTGAACGACTTACACACCAACG
ACAACGCAGCTACCAACATAACAACAACAACGACAACGCTGTGGGTGGTC
TTAAAACCTCTCTTTGCCCCGACACTGACAACGCGGCGTTTTTCCTGCGG
CAAAACAACAAAACACACCGACGCCGACAACGCACCTACCAACACCCAAA
GCCGGTTCGAGGAGTGGACAGGCTGGTGCCTCTTGGTTGTACTGGCTCTC
TACGACTTGTGTGCCGTGCTCACTCCCTGCGGTCCCCTCAAGGCCCTCGT
GAACCTCATGCAGGTGGGTGGCATTTCAGCTGCTGTTTGACTTCGTTGTG
GTCACGCGCGGCGGTTGGTTGGAATGTTTTTTTTTATTTTTATTTTCATC
ACTTCAAACCAGAGCTCACAACATTTCTGCCGGTGTTAACTCCAACCCGT
GGTCGCACAGGAGAGCCCCTCTCCCTCCCCTCCTCTCCTGCGGTACTATT
GCCTAAGATTTTTGAAGAAGAGTTAGGCCCTCTCTTCCCTGTGTACACAC
GAACTAGCGCTATCCACAACCAGGAACGCAAGCGAGAGAAAAACTCATGG
TATAAGAAAAGCTCACTCACGCCGGGACTCGAACCCATGACCTGGAGCTA
GAGGGTTGCGCGGATTCCCAACGAGACCACCGGGGCGACCGACTACACGT
GGTTTGAAGGCCTCATGTTTGGTAGGCCTTTAGTGGGCGCGAGGTGGAAC
GGCAGTCATGCATAGATGTGTGTGTTTTCTCTCTGTGGTGTCATGATCAA
TCTGATTCAACTCTCGTCGCATGATGGCAACACTTGCTCTGCTGGGCGTG
TCCATTCCTGTGCAGTTTGAGGTTTGTCTGGTGTGTTTTGAGCGGCGCTG
GTTGTACCCGGGTGTCCTTGGCGTTGCCCTCAGTCACACCCGCCGCCTGT
CTGTCCGTCCGTCTGTCTTTTTGTCTGTCTCTCTGTCTCTCTGTCTCCCT
GTCTCTCTTGTCTCTCTGTCTCTCTGCCTGCCTGCCTGCCTGCCTGCCTG
CCTGCCCCTCTCCTCCTCGAAAACCGACCTCCTTCGTCTCGGACGTAACG
CGCGAACCTCCGGCAGGAGTACGAGGAGCCGATGCCGGGCCTGCTCTACG
AGGCAGAGCTCCCCGCGGGGCCCCCACGCAGACGTCGCCCTGAAAATAAT
CGACGGGCCCCCTCCCAACAGCAAGCACGACGGGAGCAGTCGGGGGCCGC
CGGGGGTCCTCAAGAGGGTGACGCCTACTCTTCGCCGAGAGCACCCGTCG
GCACCGCTACGGGCGGCGGAGGGTTGGCGGGTTTGGCCGGGGGAGGCGAT
GAGGAAGGGGGGAGAGGGACCGACGATGCGACGCCGGCGGCGTCAGCGTC
AACAGAAGCGGCAGCGGTTGTCGTGCCGCAATCGTCGTCGCCCGGAGGCG
ACCACAGCTCTGCGAGGAGACCTGGTAAGGGCGGCGCCGGCGCAAGCGAG
TCGGTAGCCGCGCCGTTGCTGGAGCTGGTCGAATCAGACACCGCGGCGGT
GGCGGTAGGAGACGCTTCGGCCGATGGAAGTGGAACCAGAAGCGGTCGCG
GACAGGTTAGTAGCCCGCGGGCAAGAGGGGCCGCTGCTCCTGCTGCTGCT
GCTTCTGGCGACTTGGGCAGCGGTGCGGCTGTCAGCCCCCCACCCCGCAG
GGGAAACGCCGCCTCGCAACGGTTCGGAGGGGCTTCCGTGGAGGGGGATG
CCTTGATCCAGAGCCCCCGGGCGGGTGGACGGTCCAGGCGGAGAAGAAGG
TATTGGTCGAGGGTATGCACGAGGGGCAAATCGATTTGTCCGGGTGTTCG
TAGTATGTATGTACACAGGAAGAGGTGCTCGAGGTGTTGCTTAGTGATTC
GATCGGGTTTGGTATCTGGTGCCGGTAGTCGCCAGTACAAGCACCTGCTT
TGTTTTTGTGAATCAAGTATACAACTTTTGAGTCAACTGCTTTGGTGTTT
GGTTGCGTCGGAAACGTTTTGCCCTGCGGGCGGACCGATCAATGGTAAGT
GGGGAGCAGGGATGGCGTCGCCATTTCTATGGCCGTCTCATTCGTCCTTG
GGAAGCTGCCAGCGACGCTCCTGGCCTTGTCGGGGCGATTTGTCTTTCTT
TCCTGTACGGAACGAAGGCGAAAGACAAAAAAAAAAACAATTAATTGTCT
TGAACAATATATAGAGGGCCGGAACGGGAGGTAGGGGGGGCCGAAAACGG
GGAGACGTTGCAGCATGCACCACCGGTCTAGTGTCGTGCTCCTCGAAACC
CCATGATCAAACACCATGATAGCCGTCAGATTGAGCAGCTCTAACCTCCC
GCACAGATCATCGTCTAGCGGTTGCTGATTGCCCTTAACGAGCGTCACGC
GTACTGCCCCCAGCTTGTTTCGTTCAACCCCTGAGTCGCTTGAGCACGCC
GCGCTGCGAAAAGGGGAGTTTTATTTCCGCCCCATGGGCTCAGCATGGAC
TTTCCCGCACTATCCGTGCGGTGAACGTTGCCTACGGAGAGCAGAATGTA
GGAGGCACTTATTTGGCATCAGCACTTGTTCCTTCTGGTACTGTAGTGGC
ACAACACCGGGCCAAATGTGACCATGTCCAATTTTTTAGCTTGAGCTTTC
TCTCATCTTGTCCCGACTTCCAACAGGGCGGCGGCCGCGGCGGAGAACGA
CGAAGACGAGGAAGAAGAGATGGGCGTGTCGATCAAGCTTGTGAGTTTCT
CCTTGTTGCCGCTGCCGCAGTGAGGGTGTGTGCGCTACGTTAGCATGGAA
CGTGCTGACGGGCTGGCCGATCAAAGACGGCGTCAGTTCTGAACGGGGGC
ATATCGAACAGCCTAGGGCTATGTTTGAGTGTGGTTTGTATCGTGCTGTG
TCCCCGAGCGTGTGTTCCGTTTCAAGGTTTAAATGTAGTTCCGTTTCATC
CCGGTGCGGCTTCGTGCTTTGATTTATGGTGTGTGTTCCTCCTGGCGGTT
CTTCCGCCGACTGCACTAAGCACATTTTTGCTTTGCTCGTCGCGGAGTCC
CACTTACTTTGAGTGTTTCGTGGAAGACGCGTCCCGTTTTAGGTTGTTTA
CGGTAGGCGATACTGATCTCACAAAGAGAGAATTAATTGAGGTCGAGCAC
CGTTAACAAATTCTCAATGCCATCGGAGCAGCTCCAAGTAGTGCTTCTTG
CTCCCTACTGATGGAGGCGCAAGGTGCGGTGTTTTTTTGCTGGAAAATAT
GCGGATAACCACAGAAAGACTAATCACGTGAGGTATTTTTTTATTGAAAA
TATCCGTACAATCACAGAAAGACGACCCATTGGAGGTAACCTCCCAATCG
CAGACATTTGTCCATTAGTTGAATCGAAGGGATGTGTTCAATGAGGTCTT
CGTCTTCATAGCAGTGAGTGTGGAGATCAACCAACGTTATGCCGACGCCG
CCTGCCCGGCCAGGGACTCGGAGACTTCGTGTTTTACAGCGTACTGGTGT
CCAAGGCGGCGCTGTACGGCTTCACGGCGTGGGCGGCCTGCGTGGTTGTG
ATCGTCTTCGGCCTGGGGGCGACCCTCGTGCTGCTGGCGGTGTACAGGAT
GGCCCTGCCGGTGAGTTGCCGTTGCTGTCGTTGTGGTATACGATTGGTGG
CGTTGTGTTGTAGTTGTTGGTGGTGCTGCTGTTGCTATGATGGTGCTGCT
GCTATGTTGGTGCTGTTGCGGTGTTGGTGCTGCTGCGGCTGCTGCTGCTG
CTACCGGGTCTGTGTTGGCGCTGCTGCTATGTTGGTGCTGCTACAACCGG
TTTTGGCGTTTGTTCCTGTTGACTTAGCTCGCCATGTCAGCGGAGAGGAG
AGACATGTTGGTGCCTACCGGTAAGTCTTCGACCCGTGGAATAGGTAGTC
AGCGCTGACTTCCTGTAAAACCGCCTTCAACAGCGGACAATTTATTTCGC
CATCCGTTTTACGCTTCTCGTTTGTAGTCTGCTACCGTGACGTTGGTGCT
TCATTTTCAAAGCTTTGCTCGAGTTTGATCACTTTATTTTTAGATTCTTA
CGATGAACAAACTTGAGCAAGCTCTGAAAGCGCACCACCAAACTCACGTC
AGCAAGCCGCCAAGGAGAAATAGAATCGTTCAAGGGATGATGAAAGAAAT
TGTTCGCCGTTTGAACTTTTTATTACAGAAACAAAGCCGCGACTCGCGCG
AGTGGGTGAATTTGGCCCCGCCGTACAGCAGTGGGCTCTGAATATCGTCA
GCGCTGCGCGACCTAGTTTTTCCACGCTAGCGACTAGAGAAGACTGGCAG
ATGGGCGTGTTAGGTGGTGTGGTGACTATTCAACAGGAAATGCACAGCTA
TTAATAACAGGTGCAGGCTGTTGATATGAATCATGAGCATCCAATCATGG
TATATATTGCTTCCCTTGTTGTCGTGTTGTGGTCTCTCCCTCCCCCTTGC
AGGCTCTACCCATTTCGATTGGCTTCGGGACGGTCTTCTACCTTCTGACG
AGGTTCTCGATACAGCCCTACGTGGAAGCCCTCAACGACACGCCGCTCTA
CTTTTGAGAAAATAATCTTCCACCCCTGGTTCATCTTTAGCAAAGTGGTA
GGAATTCACCATCGGTGATTGGTCCTGTGGGAACAATTTCCCGTCCTTTC
GAGGTCGCGTGGTGAATGGTCTAACAACCGCTGGGGTATGCAAAACATGA
GGACCCCGCTCCCCCTGGTACACGGCGGCGGTATTGAGCGTGTTTCCTGG
TGTGTGTTGGTTAATTTTTTAGTGTTTCGCCGAAAACAACGTTTCCCTGC
ATGGGAATTCACGGGGATAAACCTTCTACAAAGTGTATGTGCCTTTTTGA
TATCAGCGGGTGCTCCATGTTTTTTTGAAGCAAGGCATCGGGAGAGGGAG
AGAGCGTTGGGCGAGGCGAGGGGATGTGTGTCACCGGTTCTTCAAAACCG
CAGGCGTTCATGCGGTGCTCTGGTGACAGGAACGGCCAGTGATGATCCCG
ATAACGCTGCCATGGTCCTAAGCAATGATTACGCCATCACTGGAGGGGGT
AGAGCCCCGCTTCAACTCCTTTTCTTTTTTGAGGCGCAGTTGCTGCAGGT
ACATGGGGTAGAATCGATCGACTTTGGAAACATAGGAAGCACGTTACTAT
GGGATCGCCAGTCACCAGTGTAATCGCGTTGTACTAGGATGTCCTGGTTT
CAACACAGGGGGGGTGGGCTCCAAATGCTCCCAGGCGTGGAGGTG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1043:12098..21192+

>mRNA_E-siliculosus-1a_F_contig1043.323.1 ID=mRNA_E-siliculosus-1a_F_contig1043.323.1|Name=mRNA_E-siliculosus-1a_F_contig1043.323.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3618bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1043:12098..21192+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCATCGACCACCGAGCCGATGGAAGATGGTGACGCCGGCGTGGGTGC
AGCGGAGGAGGCTCGAGCTCCCTTGCTCGAGGAGGGGCATGGCACGCTGC
AGCCGTCTCATCTCCGGCGGACTGCTCAACAAGATGGCATCGACCACCGA
GCCGATGGAAGATGGTGACGCCGGCGTGGGTGCAGCGGAGGAGGCTCGAG
CTCCCTTGCTCGAGGAGGGGCATGGCACGCTGCAGCCGTCTCATCTCCGG
CGGACTGCTCAACAAGGAAGCCCTGACGAGAACGGCCAGGACGACGGCGC
CTTGGACCAGGCGGACGTGGCTTACAGCGCCAACTCGTTCATGGCGGTGG
TCAAGCCGGTGACGCTATGCATGACCCTGTCCGCCTTCATCACGGTGTCT
CTGTACTCCGATGCCGAAGGGGCCACAAACAGGAAGCCCTGACGAGAACG
GCCAGGACGACGGCGCCTTGGACCAGGCGGACGTGGCTTACAGCGCCAAC
TCGTTCATGGCGGTGGTCAAGCCGGTGACGCTATGCATGACCCTGTCCGC
CTTCATCACGGTGTCTCTGTACTCCGATGCCGAAGGGGCCACAAACAGCG
CGTTGTCCGTGTACGAGGTGTACGACGAGTCGACTACAACCCTAGACCCT
TCGTCGGTGCGTCTTGGCAAGAGTTTCGTCAACGCCCTCATCATCGTGTT
GGTGCTAGCAGCGCGTTGTCCGTGTACGAGGTGTACGACGAGTCGACTAC
AACCCTAGACCCTTCGTCGGTGCGTCTTGGCAAGAGTTTCGTCAACGCCC
TCATCATCGTGTTGGTGCTAGCAGCTGCTACCTTCGTGATTGTGTGGATG
TACTGGATGAGGTGCATGCGCTGCCTTGTCGGATACATGGCGATGAGCTC
GGCCGTCCTGCTGGGAGTAATGGGAGGCGCGGTGTGGGCGGCGGCCCTGG
AAGTGTATCAGCTCCCCTGCGACGCGTTCACGTACTACGGGGTGCTGTGG
AACTTCGCGGTGGTAGGGGTCGTGGCCATATTCTACCAGAAGCTGCTACC
TTCGTGATTGTGTGGATGTACTGGATGAGGTGCATGCGCTGCCTTGTCGG
ATACATGGCGATGAGCTCGGCCGTCCTGCTGGGAGTAATGGGAGGCGCGG
TGTGGGCGGCGGCCCTGGAAGTGTATCAGCTCCCCTGCGACGCGTTCACG
TACTACGGGGTGCTGTGGAACTTCGCGGTGGTAGGGGTCGTGGCCATATT
CTACCAGAAGGGCATCCCGACGGTCGTGACGCAAGCCTACCTGGTGGCCA
CCAGCATCATAATGGCTTGGCAGCTCAGGGCATCCCGACGGTCGTGACGC
AAGCCTACCTGGTGGCCACCAGCATCATAATGGCTTGGCAGCTCAGCCGG
TTCGAGGAGTGGACAGGCTGGTGCCTCTTGGTTGTACTGGCTCTCTACGA
CTTGTGTGCCGTGCTCACTCCCTGCGGTCCCCTCAAGGCCCTCGTGAACC
TCATGCAGCCGGTTCGAGGAGTGGACAGGCTGGTGCCTCTTGGTTGTACT
GGCTCTCTACGACTTGTGTGCCGTGCTCACTCCCTGCGGTCCCCTCAAGG
CCCTCGTGAACCTCATGCAGGAGTACGAGGAGCCGATGCCGGGCCTGCTC
TACGAGGCAGAGCTCCCCGCGGGGCCCCCACGCAGACGTCGCCCTGAAAA
TAATCGACGGGCCCCCTCCCAACAGCAAGCACGACGGGAGCAGTCGGGGG
CCGCCGGGGGTCCTCAAGAGGGTGACGCCTACTCTTCGCCGAGAGCACCC
GTCGGCACCGCTACGGGCGGCGGAGGGTTGGCGGGTTTGGCCGGGGGAGG
CGATGAGGAAGGGGGGAGAGGGACCGACGATGCGACGCCGGCGGCGTCAG
CGTCAACAGAAGCGGCAGCGGTTGTCGTGCCGCAATCGTCGTCGCCCGGA
GGCGACCACAGCTCTGCGAGGAGACCTGGTAAGGGCGGCGCCGGCGCAAG
CGAGTCGGTAGCCGCGCCGTTGCTGGAGCTGGTCGAATCAGACACCGCGG
CGGTGGCGGTAGGAGACGCTTCGGCCGATGGAAGTGGAACCAGAAGCGGT
CGCGGACAGGTTAGTAGCCCGCGGGCAAGAGGGGCCGCTGCTCCTGCTGC
TGCTGCTTCTGGCGACTTGGGCAGCGGTGCGGCTGTCAGCCCCCCACCCC
GCAGGGGAAACGCCGCCTCGCAACGGTTCGGAGGGGCTTCCGTGGAGGGG
GATGCCTTGATCCAGAGCCCCCGGGCGGGTGGACGGTCCAGGCGGAGAAG
AAGGAGTACGAGGAGCCGATGCCGGGCCTGCTCTACGAGGCAGAGCTCCC
CGCGGGGCCCCCACGCAGACGTCGCCCTGAAAATAATCGACGGGCCCCCT
CCCAACAGCAAGCACGACGGGAGCAGTCGGGGGCCGCCGGGGGTCCTCAA
GAGGGTGACGCCTACTCTTCGCCGAGAGCACCCGTCGGCACCGCTACGGG
CGGCGGAGGGTTGGCGGGTTTGGCCGGGGGAGGCGATGAGGAAGGGGGGA
GAGGGACCGACGATGCGACGCCGGCGGCGTCAGCGTCAACAGAAGCGGCA
GCGGTTGTCGTGCCGCAATCGTCGTCGCCCGGAGGCGACCACAGCTCTGC
GAGGAGACCTGGTAAGGGCGGCGCCGGCGCAAGCGAGTCGGTAGCCGCGC
CGTTGCTGGAGCTGGTCGAATCAGACACCGCGGCGGTGGCGGTAGGAGAC
GCTTCGGCCGATGGAAGTGGAACCAGAAGCGGTCGCGGACAGGTTAGTAG
CCCGCGGGCAAGAGGGGCCGCTGCTCCTGCTGCTGCTGCTTCTGGCGACT
TGGGCAGCGGTGCGGCTGTCAGCCCCCCACCCCGCAGGGGAAACGCCGCC
TCGCAACGGTTCGGAGGGGCTTCCGTGGAGGGGGATGCCTTGATCCAGAG
CCCCCGGGCGGGTGGACGGTCCAGGCGGAGAAGAAGGGCGGCGGCCGCGG
CGGAGAACGACGAAGACGAGGAAGAAGAGATGGGCGTGTCGATCAAGCTT
GGCGGCGGCCGCGGCGGAGAACGACGAAGACGAGGAAGAAGAGATGGGCG
TGTCGATCAAGCTTGGACTCGGAGACTTCGTGTTTTACAGCGTACTGGTG
TCCAAGGCGGCGCTGTACGGCTTCACGGCGTGGGCGGCCTGCGTGGTTGT
GATCGTCTTCGGCCTGGGGGCGACCCTCGTGCTGCTGGCGGTGTACAGGA
TGGCCCTGCCGGGACTCGGAGACTTCGTGTTTTACAGCGTACTGGTGTCC
AAGGCGGCGCTGTACGGCTTCACGGCGTGGGCGGCCTGCGTGGTTGTGAT
CGTCTTCGGCCTGGGGGCGACCCTCGTGCTGCTGGCGGTGTACAGGATGG
CCCTGCCGGCTCTACCCATTTCGATTGGCTTCGGGACGGTCTTCTACCTT
CTGACGAGGTTCTCGATACAGCCCTACGTGGAAGCCCTCAACGACACGCC
GCTCTACTTTTGAGCTCTACCCATTTCGATTGGCTTCGGGACGGTCTTCT
ACCTTCTGACGAGGTTCTCGATACAGCCCTACGTGGAAGCCCTCAACGAC
ACGCCGCTCTACTTTTGA