mRNA_E-siliculosus-1a_F_contig15518.3193.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A2A3XCA5_9GAMM (STN domain-containing protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A2A3XCA5_9GAMM) HSP 1 Score: 567 bits (1462), Expect = 1.500e-193 Identity = 275/318 (86.48%), Postives = 295/318 (92.77%), Query Frame = 1
Query: 1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
N+FKARFHIDDDQSLTFSYLGTELSYNNVSDRQ+ GEV DGD+AWRRFGDA+T+SDSVSLRYNLNPSSPL+NLEANAYFV+TEG+RYTEAG+PVVQ GT+MT+L WMIGVCE NPV D Y+ACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQ + DNTMQP+GERSIASAFGNLQWENE FTLAAGLRYDYYKLKGST+LPG EWTY+DRYARASRYAENQLASRTRNCHNPSPG+SERSIQMACDSLAA+EGYANDPTT PNYET + P WLS+TVMQDY
Sbjct: 367 NLFKARFHIDDDQSLTFSYLGTELSYNNVSDRQVLR--AGEVVDGDNAWRRFGDANTTSDSVSLRYNLNPSSPLLNLEANAYFVSTEGQRYTEAGRPVVQGGTNMTELAWMIGVCETNPVQDMYYNACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQFGANDNTMQPNGERSIASAFGNLQWENEAFTLAAGLRYDYYKLKGSTKLPGVEWTYYDRYARASRYAENQLASRTRNCHNPSPGSSERSIQMACDSLAAFEGYANDPTTLPNYETHWRYEPTWLSDTVMQDY 682
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A3D4KLN3_HALSX (Uncharacterized protein n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A3D4KLN3_HALSX) HSP 1 Score: 531 bits (1369), Expect = 1.280e-179 Identity = 261/318 (82.08%), Postives = 281/318 (88.36%), Query Frame = 1
Query: 1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
N+FKARFHIDDDQSLTFSYLGTELSYNNVSDRQI GEV DGDDAWRRFGDASTSSDSVSLRYNLNPSSPL+NLEANAYFV+TEG+RYTEAG+PVV NGTDMT+LYWMIGVCEQNP+PDNAYSACRAGLDNNNRTQIDTYGFTLENTA F+LGG+DGFSSNHG+EYFIDKGESTTTQERGGRQ + DNTMQP+GERSIASAFGNLQWE+ETFTLAAGLRYDYYKLKGSTQLPGAEWTY DRYA A RYA+++L S C SP SE Q ACD + + Y NDPTTFPNY+TS NFNPMW SETV+ DY
Sbjct: 365 NLFKARFHIDDDQSLTFSYLGTELSYNNVSDRQIMR--AGEVVDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLLNLEANAYFVSTEGQRYTEAGRPVVLNGTDMTELYWMIGVCEQNPIPDNAYSACRAGLDNNNRTQIDTYGFTLENTAHFALGGIDGFSSNHGVEYFIDKGESTTTQERGGRQFGANDNTMQPNGERSIASAFGNLQWEDETFTLAAGLRYDYYKLKGSTQLPGAEWTYNDRYAMALRYAQSRLNSAESKCR--SPYLSEAQRQRACDRIPQEQAYVNDPTTFPNYQTSNNFNPMWQSETVLHDY 678
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: UPI0017889776 (TonB-dependent receptor n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=UPI0017889776) HSP 1 Score: 514 bits (1323), Expect = 1.040e-172 Identity = 256/318 (80.50%), Postives = 277/318 (87.11%), Query Frame = 1
Query: 1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
N+FKAR HIDDDQSLTFSYLGTELSYNNVSDRQI GEV DGDDAWRRFGDAST+SDSVSLRYNLNPSSPLINLEANAYFV+TEG+RYTEAG+PVV NGTDMT+L WM+GVCEQNP+PDNAYSACRAGLDNNNRTQIDTYGFTLENTA F+LGG+DGFSSNHG+EYFIDKGESTT QERGGRQLAS DNTMQPSGERSIASAF NLQWENE FTLAAGLRYDYYKLKGST+LPG EWTY +RY RASR AEN L +R NC S E+S Q ACD + +EGY NDPT+ +YETS + P WLS+TVMQDY
Sbjct: 367 NLFKARLHIDDDQSLTFSYLGTELSYNNVSDRQIMR--AGEVVDGDDAWRRFGDASTTSDSVSLRYNLNPSSPLINLEANAYFVSTEGQRYTEAGRPVVLNGTDMTELNWMMGVCEQNPIPDNAYSACRAGLDNNNRTQIDTYGFTLENTAHFALGGIDGFSSNHGVEYFIDKGESTTAQERGGRQLASIDNTMQPSGERSIASAFSNLQWENEAFTLAAGLRYDYYKLKGSTKLPGVEWTYHNRYDRASRRAENGLRTRRSNCI--SAIIPEQSRQTACDDIPTWEGYVNDPTSMIDYETSWRYEPTWLSDTVMQDY 680
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A2A4HHN9_9GAMM (Heme transporter n=2 Tax=Halomonas nigrificans TaxID=2042704 RepID=A0A2A4HHN9_9GAMM) HSP 1 Score: 501 bits (1290), Expect = 1.810e-167 Identity = 246/318 (77.36%), Postives = 272/318 (85.53%), Query Frame = 1
Query: 1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
N+FKARFHIDDDQSLTFSYLGTELSYNNVSDRQ+ GEV DGD+AWRRFGDA+T+SDSVSLRYNLNP SPLINLEANAYFV+TEG RY EAG+PV++ GT+MTDLYWM+G CEQNPV D Y+ACRAGLDNNNRT+IDTYGFTLENTARFSLGG+DG SSNHGIEYFIDKG+STTTQERGGRQ + NTMQP+GERSIASAFGNLQWE+ETFTLAAGLRYDYYKLKGSTQLPGAEWTY DRYA A RYA+++L S C SP SE Q ACD + + + NDPTTFPNY+T NFNPMW SETV+ DY
Sbjct: 393 NLFKARFHIDDDQSLTFSYLGTELSYNNVSDRQVLR--AGEVVDGDNAWRRFGDANTTSDSVSLRYNLNPESPLINLEANAYFVSTEGNRYIEAGRPVIEGGTNMTDLYWMMGSCEQNPVQDRHYNACRAGLDNNNRTEIDTYGFTLENTARFSLGGIDGLSSNHGIEYFIDKGKSTTTQERGGRQFGGSLNTMQPNGERSIASAFGNLQWEDETFTLAAGLRYDYYKLKGSTQLPGAEWTYNDRYAMALRYAQSRLNSAESQCR--SPYLSEAQRQRACDRIPQEQAFVNDPTTFPNYQTGNNFNPMWQSETVLHDY 706
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A1G8AJC8_9PSED (Heme acquisition protein HasR n=1 Tax=Pseudomonas flavescens TaxID=29435 RepID=A0A1G8AJC8_9PSED) HSP 1 Score: 335 bits (859), Expect = 6.180e-104 Identity = 163/317 (51.42%), Postives = 211/317 (66.56%), Query Frame = 1
Query: 4 IFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
+FK R + +Q+L F+Y+GTELSYNNVSDR++ N V G DGD+AW +FGDAS S S L Y P SP I+L A Y+VTT ERYT AG+P+V G DMT+ W +G C QNP+PD+ C AGL N T+IDTYGF L+NTARF++ G +GFS NHG+EYF+DKG S ++ + G S+ NT+ P+G+RSIASAFGNL +E + TL+AGLRYDYY LKG TQ+PG EWTY R R L + NC + + SER+ ++AC+S+ + E DPT+ N+ TSGN+ P WLS M DY
Sbjct: 365 LFKGRLKLTPEQALQFTYVGTELSYNNVSDRRVANAVDGSAIDGDEAWAKFGDASARSQSFGLDYTFTPDSPWIDLNAKLYYVTTRNERYTAAGRPIVTGGVDMTETAWRLGFCRQNPIPDSWTQECEAGLGNETHTRIDTYGFKLDNTARFAIAGQEGFSFNHGLEYFLDKGTSKSSSDYQGEAFTSSSNTLNPNGKRSIASAFGNLTYETDAITLSAGLRYDYYHLKGKTQVPGTEWTYQTRLERFISRNTTSLINARNNCADLT--LSERARRVACNSIPSLEAALADPTSVSNFYTSGNYAPQWLSNPGMYDY 679
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A1Q9XVE3_9PSED (STN domain-containing protein n=2 Tax=Pseudomonas sp. PA15(2017) TaxID=1932111 RepID=A0A1Q9XVE3_9PSED) HSP 1 Score: 326 bits (835), Expect = 9.710e-101 Identity = 162/319 (50.78%), Postives = 216/319 (67.71%), Query Frame = 1
Query: 1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLAST-DNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
++FK R+H+ +QS+ F+Y+GTE+SYNNVSDR++ NP T + DGD+AW ++G+A S S Y+ NP S LI+L+ Y+V T +R T AG+PV QNGT+MT+L W IGVC QNPV + +AC G N T I+TYGFTL+NTARF++ G++GFS NHG+EYF DKGESTTT+ R G ++ T DN++ P+G+RSIASAFGNL+WENET+TLA GLRYDYY+LKG T+LP ++WTY Y R N+LA C A R Q C+++ YE Y DPT+ P YE+ + W S + DY
Sbjct: 327 DLFKLRWHLTPEQSMQFTYIGTEISYNNVSDRRVINPSTAQALDGDEAWIKYGNAEARSKSYGFDYSFNPDSDLIDLKVKFYYVDTRNQRETAAGRPVYQNGTNMTELAWQIGVCNQNPVQNTYATACERGYGNEADTSIETYGFTLDNTARFAVAGVEGFSFNHGLEYFQDKGESTTTKVREGADVSRTADNSLNPNGKRSIASAFGNLKWENETYTLAGGLRYDYYQLKGKTRLPISDWTYVSSYDRTLAAYINRLARSIELC-----AAGGRGYQTHCNNVPLYERYVADPTSVPRYESI--YPAQWSSVNTLADY 638
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: UPI001CED62BA (TonB-dependent hemoglobin/transferrin/lactoferrin family receptor n=1 Tax=Pseudomonas sp. MM211 TaxID=2866808 RepID=UPI001CED62BA) HSP 1 Score: 321 bits (823), Expect = 1.080e-98 Identity = 159/317 (50.16%), Postives = 200/317 (63.09%), Query Frame = 1
Query: 4 IFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
+FK RF + +QSL F+Y+GT+LSYNNVSDR++T+ V G DGD AW +FGDAS S S L Y P SP I+L A Y+VTT ER T AG+P+V +G DMT W +G C QNP+P + C AGL + T++DTYGF L+NTARF++ G++GF NHG+EYF+DKG S G AS NT+ P+G+RSIASAFGNL +E E FTL+ GLRYDYY LKG TQ+P EW Y R R + NQL + C IQ C+S +E DPT+ NY TSGN+ P WLS M+DY
Sbjct: 371 LFKGRFTLTPEQSLQFTYVGTDLSYNNVSDRRVTSAVDGSAIDGDAAWAKFGDASARSQSFGLDYTFTPDSPWIDLNAKLYYVTTRNERNTAAGRPIVTDGVDMTATAWRLGYCRQNPIPADWLQECEAGLGSETNTRVDTYGFKLDNTARFAVAGVEGFHFNHGLEYFLDKGTSKNQSNYQGENFASGQNTLNPNGKRSIASAFGNLTFETEQFTLSGGLRYDYYHLKGKTQVPSTEWAYQSRLERFTTVVTNQLNNARARC--------AAGIQSGCNSAITFEAALADPTSVANYYTSGNYAPRWLSNAGMRDY 679
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: UPI0013F14ED8 (TonB-dependent hemoglobin/transferrin/lactoferrin family receptor n=1 Tax=Pseudomonas dryadis TaxID=2487520 RepID=UPI0013F14ED8) HSP 1 Score: 319 bits (817), Expect = 8.000e-98 Identity = 160/318 (50.31%), Postives = 217/318 (68.24%), Query Frame = 1
Query: 4 IFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGY-ANDPTTFPNYETSGNFNPMWLSETVMQDY 954
+FK R + +QSL F+Y+GT+LSYNNVSDR++T+ V G V DG++AW +FGDAS S S L Y +P SP I+L+A Y+VTTE +R T AG+P+V +G +MT+ W +G C QNP+P + AC AGL N + T+IDTYGFTL+NTARF+LGG++GFS NHG+EY+ DKG S T + G +AS NT+ P+G+RSIASAFG+L +E E TL+AGLRYD Y LKG TQLP +W Y R E QL + NC NP+ S+R+ Q ACD++ ++GY A P + P Y +G + P W+S +++Y
Sbjct: 365 LFKGRLILTPEQSLQFTYVGTDLSYNNVSDRRVTSAVDGSVIDGEEAWAKFGDASARSQSFGLDYTYDPDSPWIDLKAKVYYVTTENQRDTAAGRPIVTDGVNMTETAWRLGYCRQNPIPTSWVEACEAGLGNESETRIDTYGFTLDNTARFALGGVEGFSFNHGLEYYQDKGTSKTRSDYQGETIASAQNTLNPNGKRSIASAFGSLTFETEQVTLSAGLRYDSYWLKGKTQLPVTDWNYRSRAELVQSNIETQLQTYIANCANPN--LSDRNRQRACDAIPTWQGYLAAGPESAPFYN-NGQYAPTWVSSPGLREY 679
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A4Q9QJN8_9PSED (Heme transporter n=1 Tax=Pseudomonas daroniae TaxID=2487519 RepID=A0A4Q9QJN8_9PSED) HSP 1 Score: 316 bits (810), Expect = 8.040e-97 Identity = 159/317 (50.16%), Postives = 213/317 (67.19%), Query Frame = 1
Query: 4 IFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
+FK R + +QSL F+Y+GT+L YNNVSDR++TNPV G RDG++AW ++GDAS S S L Y+ NP SPLI+ +A Y+VTT+ +R +AG+P+V +G DMT+ W +G C QNP+P + AC AGL N T+IDTYGFTL+NTARF+LGG +GFS NHG+EY+ DKG S T+ + G +AS NT+ P+G+RSIASAFG+L +E E TL+AGLRYD Y LKG TQLP +W Y R +R L + RNC + S S+R AC++++ +EGY DPTT Y T + W S M++Y
Sbjct: 364 LFKGRLTLTPEQSLQFTYVGTDLGYNNVSDRRVTNPVDGSARDGEEAWIKYGDASARSQSFGLDYSFNPDSPLIDFKAKLYYVTTKNQRDNDAGRPIVTDGVDMTETAWRLGFCRQNPIPASWEPACEAGLGNETETRIDTYGFTLDNTARFTLGGAEGFSFNHGLEYYQDKGTSKTSSDYQGETIASAQNTLNPNGKRSIASAFGSLTFETEQVTLSAGLRYDSYWLKGKTQLPVTDWAYESRSQYYNRQITQSLETSRRNCTDFSLRESQRI--NACNNISRFEGYLADPTTDSRYSTDF-YAGRWSSNPGMREY 677
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: UPI0013D4369C (TonB-dependent receptor n=1 Tax=Halomonas socia TaxID=1081866 RepID=UPI0013D4369C) HSP 1 Score: 297 bits (760), Expect = 1.450e-92 Identity = 141/252 (55.95%), Postives = 182/252 (72.22%), Query Frame = 1
Query: 1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRY 756
N+FKAR ++ DQ+L F+YL T++SYNNVSDR++TNP G VRDGD+AW+++G+A +S S+ L Y NP S I+LEA Y V+T+ ERYT G+PV+ +G +MT+ W G C+Q P PDN S C AGL +N T I TYG LENTARF+LGG+DGF NHGIEYF D+G+S T +R G + +NT+QP+G RSIASAFGNL WEN+T+TL GLRYDYY+LKG T++PG EW Y R + Y
Sbjct: 30 NLFKARLNLTPDQALQFTYLDTDISYNNVSDRRVTNPSDGSVRDGDEAWQQYGNAEAASQSIGLDYTFNPDSNWIDLEARVYRVSTDNERYTREGRPVITDGINMTEEAWRTGRCDQVPFPDNWQSECEAGLGSNAVTNITTYGLALENTARFTLGGVDGFRFNHGIEYFQDRGDSNTEYDRQGTAITMAENTLQPNGRRSIASAFGNLVWENDTWTLGGGLRYDYYRLKGDTRVPGVEWNYSTRQEQFDDY 281 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig15518.3193.1 >prot_E-siliculosus-1a_F_contig15518.3193.1 ID=prot_E-siliculosus-1a_F_contig15518.3193.1|Name=mRNA_E-siliculosus-1a_F_contig15518.3193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=318bp NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRback to top mRNA from alignment at E-siliculosus-1a_F_contig15518:3..956+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig15518.3193.1 ID=mRNA_E-siliculosus-1a_F_contig15518.3193.1|Name=mRNA_E-siliculosus-1a_F_contig15518.3193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=954bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15518:3..956+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15518:3..956+ >mRNA_E-siliculosus-1a_F_contig15518.3193.1 ID=mRNA_E-siliculosus-1a_F_contig15518.3193.1|Name=mRNA_E-siliculosus-1a_F_contig15518.3193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1908bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15518:3..956+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |