prot_E-siliculosus-1a_F_contig1041.318.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1041.318.1
Unique Nameprot_E-siliculosus-1a_F_contig1041.318.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length557
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1041.318.1 vs. uniprot
Match: D7G283_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G283_ECTSI)

HSP 1 Score: 1030 bits (2662), Expect = 0.000e+0
Identity = 525/558 (94.09%), Postives = 536/558 (96.06%), Query Frame = 0
Query:    1 MFRDPTEPGSGTRRFSSAVYSSRLAGATRTFRDPIVSHGLETAGTVGGRSSTGGRGGSRSDMDRMIPEGASDSSPATTAGGNQTSTANGSSRRASLFEWLVAKKGTGGA-ELSEYMSAIECGSDEQQDAIHDEEQDLGRGFSDYEASMDMNSLRRQAAVVEV-AEEGATTTIPSIDNISSDPPLTAEALEHHTRTHSSGENNRSEGSASAALNGNDTRDILAASAGRSLPRPRSTSKSSRTGGDDEAGDAVLPGFHQSHDETQEELTIDEPTTLAAADIKDIYADDVTGGESRRVTFLSGTMGLTVDISDPMQPQPPDEFDREHRQQHKKHDDDDQWPASPCSGVILNTSPRYGTLQAFRKEMASRGINAQMFHTGWKGSFLPPRDIRLFMTDSRKASVLYWRYKTGPFGRGAAAGANQGLGAEDRRVIPLSSLANIGPAELYRQGAPSSRRNLLSWLSIPSSLRRANEDAPVGYGKIQTDKDLDGVDKGTAGLVEAVPVLALSYWVEGEPRWVGDQPKRLLVRPDSLDSFQRLSHGLRLCCLHFHNYSCPQDLEDIR 556
            MFRDPTEPGSGTRRFSSAVYSSRLAGATRTFRDPI+SHGLETAGT GGRSSTG RGGSRSDMDRMIPEGASDSSPATTAGGNQTSTAN SSRRASLFEWLVAKKGTGG  E S+YMSA+ECGSDEQQDA+H+EEQD GRGFSDYE+SMDMNSLRRQAAVVEV AEEGATTTIPSIDNISSDPPLTAEALEHHTRTHSSG++NRSEGSASAALNGNDT+ ILAASAGRSLPRPRSTSKSS TG DDEAGDAVLP FHQSHDE QEELTIDEPTT AA DI DIYADDVTGGESRRVTFLSGTMGLTVDISDPMQPQP DEFDREHRQQH KHDD DQWPASPCSGVIL+TSPRYGTLQAFRKEMASRGINAQMFHTGWKGSFLPPRDIRLFMTDSRKASVLYWRYKTGPFGRGAAAGANQGLGAEDRRVIPLSSLANIGPAELYRQG PSSRRNLLSWLSIPSSLRRA+EDAPVGYGKIQ DKDLD VDKGTAGLVEAVPVLALSYWVEGEPRWVGDQPKRLLVRPDSLDSFQRLSHGLRLCCLHFHNYSCPQDLEDIR
Sbjct:    1 MFRDPTEPGSGTRRFSSAVYSSRLAGATRTFRDPIISHGLETAGTAGGRSSTGRRGGSRSDMDRMIPEGASDSSPATTAGGNQTSTANSSSRRASLFEWLVAKKGTGGGGEFSQYMSAVECGSDEQQDAVHNEEQDFGRGFSDYESSMDMNSLRRQAAVVEVLAEEGATTTIPSIDNISSDPPLTAEALEHHTRTHSSGKSNRSEGSASAALNGNDTKHILAASAGRSLPRPRSTSKSSHTGSDDEAGDAVLPEFHQSHDEAQEELTIDEPTTPAAVDINDIYADDVTGGESRRVTFLSGTMGLTVDISDPMQPQPSDEFDREHRQQHTKHDDYDQWPASPCSGVILDTSPRYGTLQAFRKEMASRGINAQMFHTGWKGSFLPPRDIRLFMTDSRKASVLYWRYKTGPFGRGAAAGANQGLGAEDRRVIPLSSLANIGPAELYRQGPPSSRRNLLSWLSIPSSLRRASEDAPVGYGKIQKDKDLDSVDKGTAGLVEAVPVLALSYWVEGEPRWVGDQPKRLLVRPDSLDSFQRLSHGLRLCCLHFHNYSCPQDLEDIR 558          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.318.1 vs. uniprot
Match: A0A6H5L7W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W7_9PHAE)

HSP 1 Score: 871 bits (2250), Expect = 1.220e-314
Identity = 459/582 (78.87%), Postives = 477/582 (81.96%), Query Frame = 0
Query:    4 DPTEPGSGTRRFSSAVYSSRLAGATRTFRDP-----------------------------IVSHGLETAGTVGGRSSTGGRGGSRSDMDRMIPEGASDSSPATTAGGNQTSTANGSSRRASLFEWLVAKKGTGGAELSEYMSAIECGSDEQQDAIHDEEQDLGRGFSDYEASMDMNSLRRQAAVVEVAEEGATTTIPSIDNISSDPPLTAEALEHHTRTHSSGENNRSEGSASAALNGNDTRDILAASAGRSLPRPRSTSKSSRTGGDDEAGDAVLPGFHQSHDETQEELTIDEPTTLAAADIKDIYADDVTGGESRRVTFLSGTMGLTVDISDPMQPQPPDEFDREHRQQHKKHDDDDQWPASPCSGVILNTSPRYGTLQAFRKEMASRGINAQMFHTGWKGSFLPPRDIRLFMTDSRKASVLYWRYKTGPFGRGAAAGANQGLGAEDRRVIPLSSLANIGPAELYRQGAPSSRRNLLSWLSIPSSLRRANEDAPVGYGKIQTDKDLDGVDKGTAGLVEAVPVLALSYWVEGEPRWVGDQPKRLLVRPDSLDSFQRLSHGLRLCCLHFHNYSCPQDLEDIR 556
            D T P     RF  + Y  R +G TR FRDP                             IVSHGLETAGT GGRSSTG RGGSRSDMDRM  +GASDSSP T+ GGNQ STA G SRRASLFEWLV KKGTGGAE SEY+SA+E GSDEQQDA+HDEEQDLGRGFSDYE+SM+MNSLRR++AVVEVAEEGAT TIPSIDNISSDPPLTAE LE HTRTHS G+NNRSE  +SA LNGNDTRDIL ASAGRSLPRPR TS SSRTGGDDEAGDAVLP FHQSHDETQEE+TIDEPTT AAADI+DIYADDVT GESRRVTFLS TMGLTVDISDPMQP                       PASPCSGVIL+TSPRYGTLQAFRKEMASRGINAQMFHTGWKGSFLPPRDIRLFMTDSRKASVLYWRYKTGPFGR  AAG NQGLGAEDRRVIPLSSLANIGPAELYR GAPSSRRNLLSWLSIPSSLRRAN D+PV Y KIQ DKDLDGVD G AGLVEAVPVLALSYWVEG+PRWVGD PKRLLV PDSLDSFQRLSHGLRLCCLHFHNYSCPQDLEDIR
Sbjct:   20 DTTTPVRRNSRFPFSTYPGRFSGTTRMFRDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVSHGLETAGTPGGRSSTGRRGGSRSDMDRMTSKGASDSSPTTSPGGNQASTAYGGSRRASLFEWLVPKKGTGGAEFSEYVSAVESGSDEQQDAVHDEEQDLGRGFSDYESSMNMNSLRRESAVVEVAEEGATATIPSIDNISSDPPLTAEVLEQHTRTHSGGKNNRSESRSSATLNGNDTRDILTASAGRSLPRPRGTSMSSRTGGDDEAGDAVLPEFHQSHDETQEEITIDEPTTPAAADIEDIYADDVTHGESRRVTFLSRTMGLTVDISDPMQPXXXXXXXXXXXXXXXXXXXXXXXPASPCSGVILDTSPRYGTLQAFRKEMASRGINAQMFHTGWKGSFLPPRDIRLFMTDSRKASVLYWRYKTGPFGRRTAAGGNQGLGAEDRRVIPLSSLANIGPAELYRHGAPSSRRNLLSWLSIPSSLRRANGDSPVDYRKIQKDKDLDGVDNGKAGLVEAVPVLALSYWVEGKPRWVGDHPKRLLVMPDSLDSFQRLSHGLRLCCLHFHNYSCPQDLEDIR 601          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1041.318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G283_ECTSI0.000e+094.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7W7_9PHAE1.220e-31478.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1041contigE-siliculosus-1a_F_contig1041:14674..17672 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1041.318.1mRNA_E-siliculosus-1a_F_contig1041.318.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1041 14674..17672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1041.318.1 ID=prot_E-siliculosus-1a_F_contig1041.318.1|Name=mRNA_E-siliculosus-1a_F_contig1041.318.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=557bp
MFRDPTEPGSGTRRFSSAVYSSRLAGATRTFRDPIVSHGLETAGTVGGRS
STGGRGGSRSDMDRMIPEGASDSSPATTAGGNQTSTANGSSRRASLFEWL
VAKKGTGGAELSEYMSAIECGSDEQQDAIHDEEQDLGRGFSDYEASMDMN
SLRRQAAVVEVAEEGATTTIPSIDNISSDPPLTAEALEHHTRTHSSGENN
RSEGSASAALNGNDTRDILAASAGRSLPRPRSTSKSSRTGGDDEAGDAVL
PGFHQSHDETQEELTIDEPTTLAAADIKDIYADDVTGGESRRVTFLSGTM
GLTVDISDPMQPQPPDEFDREHRQQHKKHDDDDQWPASPCSGVILNTSPR
YGTLQAFRKEMASRGINAQMFHTGWKGSFLPPRDIRLFMTDSRKASVLYW
RYKTGPFGRGAAAGANQGLGAEDRRVIPLSSLANIGPAELYRQGAPSSRR
NLLSWLSIPSSLRRANEDAPVGYGKIQTDKDLDGVDKGTAGLVEAVPVLA
LSYWVEGEPRWVGDQPKRLLVRPDSLDSFQRLSHGLRLCCLHFHNYSCPQ
DLEDIR*
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