prot_E-siliculosus-1a_F_contig1504.2935.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1504.2935.1
Unique Nameprot_E-siliculosus-1a_F_contig1504.2935.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length119
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1504.2935.1 vs. uniprot
Match: A0A6H5KBZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ9_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 7.250e-80
Identity = 111/118 (94.07%), Postives = 113/118 (95.76%), Query Frame = 0 
Query:    1 MCGFKCVGQCCGLLSLFGIFFLFSVGHMFASQPMFTDVEVWEEHHDHDASVNCYIGGVIYICTLAASVGCFCFDKKRSARPPTIAHQASTTSYLDYTPENVPSPGEDEGAAILPRVAL 118
            MCGFKC+GQCCGLLSLFGIFFLFSVGHMFASQPMFTDVEVWEEHHDHDASVNCYIGGVIYICTLAASVGCFCFDKKRSARPP IAHQASTTS+L YTPENVPSPGED GAAILPR  L
Sbjct:    1 MCGFKCIGQCCGLLSLFGIFFLFSVGHMFASQPMFTDVEVWEEHHDHDASVNCYIGGVIYICTLAASVGCFCFDKKRSARPPPIAHQASTTSHLGYTPENVPSPGEDVGAAILPRAVL 118
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BLAST of mRNA_E-siliculosus-1a_F_contig1504.2935.1 vs. uniprot
Match: D7FVZ4_ECTSI (Ferredoxin nitrite reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ4_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.410e-53
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0 
Query:   28 MFASQPMFTDVEVWEEHHDHDASVNCYIGGVIYICTLAASVGCFCFDKKRSARPPTIAHQASTTSYLDYTPENVPSPGEDEGAAILPR 115
            MF SQPMFTDVEVWEEHHDHDASVNCYIGGVIYICTLAASVGCFCFDKKRSARPPTIAHQASTTS+LDYTPENVPSPGEDEGAAILPR
Sbjct:    1 MFPSQPMFTDVEVWEEHHDHDASVNCYIGGVIYICTLAASVGCFCFDKKRSARPPTIAHQASTTSFLDYTPENVPSPGEDEGAAILPR 88
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBZ9_9PHAE7.250e-8094.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVZ4_ECTSI1.410e-5397.73Ferredoxin nitrite reductase n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 12..31
NoneNo IPR availableTMHMMTMhelixcoord: 51..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1504contigE-siliculosus-1a_F_contig1504:7636..10664 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1504.2935.1mRNA_E-siliculosus-1a_F_contig1504.2935.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1504 7191..10789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1504.2935.1 ID=prot_E-siliculosus-1a_F_contig1504.2935.1|Name=mRNA_E-siliculosus-1a_F_contig1504.2935.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=119bp
MCGFKCVGQCCGLLSLFGIFFLFSVGHMFASQPMFTDVEVWEEHHDHDAS
VNCYIGGVIYICTLAASVGCFCFDKKRSARPPTIAHQASTTSYLDYTPEN
VPSPGEDEGAAILPRVAL*
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