mRNA_E-siliculosus-1a_F_contig149.2856.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: D8LHH9_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH9_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 5.210e-145 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 2
Query: 8 GPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGHEVNFPLIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTMEVPSGKGYLRVTPTS 613
GPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGHEVNFPLIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTMEVPSGKGYLRVTPTS
Sbjct: 24 GPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGHEVNFPLIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTMEVPSGKGYLRVTPTS 225
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: W6MEY3_9EUCA (Peroxiredoxin6-like protein (Fragment) n=1 Tax=Coenobita clypeatus TaxID=474045 RepID=W6MEY3_9EUCA) HSP 1 Score: 265 bits (678), Expect = 6.250e-84 Identity = 125/202 (61.88%), Postives = 155/202 (76.73%), Query Frame = 2
Query: 8 GPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGHEVNFP--LIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTMEVPSGKGYLRVTP 607
G IKLH YLG SWG+L SHPAD+TPVCTTELG AKL EF KR+VK++AISCD +E H GWI DIKA+ +FP +IAD DR +A +LGM+ PD +A G+P+T R V+VI P+K LKL++ YPA+TGRNFDEIIR +DSLQLTA + +ATPADW+ GG CMVLP++SP+DA FP+H+ +VPSGK YLR TP
Sbjct: 2 GVIKLHSYLGDSWGILFSHPADYTPVCTTELGRVAKL---APEFEKRNVKLMAISCDSVEDHLGWIEDIKAYNNLTGDFPYPIIADPDRDLAVTLGMIDPDEKTASGMPLTARAVFVIGPDKKLKLSILYPATTGRNFDEIIRVVDSLQLTAQKKVATPADWKCGGHCMVLPSISPDDAQNMFPQHQVHKVPSGKEYLRTTP 200
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: C5H3W2_ERISI (Glutathione peroxidase n=1 Tax=Eriocheir sinensis TaxID=95602 RepID=C5H3W2_ERISI) HSP 1 Score: 259 bits (663), Expect = 2.000e-81 Identity = 121/205 (59.02%), Postives = 160/205 (78.05%), Query Frame = 2
Query: 5 QGPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGHEVN----FPLIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTMEVPSGKGYLRVTP 607
+GPIKLH YLG WG+L SHP+D+TPVCTTELGT AK+ E F KR+VK++AISCD +E H GWI DI+A+ H+++ +P+IAD DR +A +LGM+ PD +A GLP+T R V+VI P+K LKL++ YPA+TGRNF+EI+R IDSLQLT + +ATP++W G CMV+P+VSPE+A + FPEHK ++VPSGK YLR+TP
Sbjct: 17 EGPIKLHSYLGDMWGILFSHPSDYTPVCTTELGTVAKMMPE---FTKRNVKVMAISCDSVEDHNGWIKDIQAY--HKLSGPFPYPIIADQDRDLAVTLGMIDPDEKTAAGLPLTARAVFVIGPDKKLKLSILYPATTGRNFNEILRVIDSLQLTKEKKVATPSNWCNGDQCMVVPSVSPEEAKKLFPEHKVIQVPSGKEYLRMTP 216
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: UPI001E672362 (peroxiredoxin-6-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E672362) HSP 1 Score: 255 bits (651), Expect = 1.270e-79 Identity = 121/202 (59.90%), Postives = 153/202 (75.74%), Query Frame = 2
Query: 8 GPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHT--GHEVNFPLIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTMEVPSGKGYLRVTP 607
G IKLH YLG SWG++ +HPADFTPVCTTELG AKL E F KR+VK+LAISCD +E H GWI DI+A++ E +P+I D DR +A +LGM+ PD +AEGLP++ R V++I P+K LKL+L YPA+TGRNF+EI+RAIDS+QLTA + +ATP DW+ G +CMVLP+VS E+A FPEH VPSGK Y+R TP
Sbjct: 18 GTIKLHTYLGDSWGIVFAHPADFTPVCTTELGCVAKLVPE---FTKRNVKLLAISCDSVEDHVGWIKDIQAYSELSGEFPYPIIGDKDRDLAVTLGMIDPDEKNAEGLPLSCRAVFLIGPDKRLKLSLLYPATTGRNFNEILRAIDSIQLTAAKKVATPVDWKPGSACMVLPSVSAEEAKSLFPEHTVHNVPSGKEYIRTTP 216
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: A0A2R2YWF5_EUPSU (Perxiredoxin-6 n=1 Tax=Euphausia superba TaxID=6819 RepID=A0A2R2YWF5_EUPSU) HSP 1 Score: 255 bits (651), Expect = 1.450e-79 Identity = 116/203 (57.14%), Postives = 151/203 (74.38%), Query Frame = 2
Query: 5 QGPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGHEVNFP--LIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTMEVPSGKGYLRVTP 607
+G I LHDYLG WG++ SHPAD+TPVCTTELG AKL E F KR+ K+ A+SCD +E H GWI DI+A+ + NFP ++AD R +A LGM+ PD +A G+P+T R V++I P+K LKL++ YPA+TGRNFDEI+R +DSLQLTA + +ATPADW++G SCMV+P +S E A + FP+HK +VPSGK YLR TP
Sbjct: 17 KGTIHLHDYLGDKWGIMFSHPADYTPVCTTELGRVAKLTPE---FTKRNCKLQAVSCDSVEDHHGWIKDIQAYNNLDGNFPYPIVADEKRELAVQLGMIDPDEKTASGMPLTARAVFIIGPDKKLKLSILYPATTGRNFDEILRVLDSLQLTAHKKVATPADWKQGSSCMVVPNISKEQAKQMFPQHKVHQVPSGKEYLRTTP 216
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: UPI001CF40163 (peroxiredoxin-6-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF40163) HSP 1 Score: 254 bits (650), Expect = 1.860e-79 Identity = 118/204 (57.84%), Postives = 154/204 (75.49%), Query Frame = 2
Query: 5 QGPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGHEVNFP--LIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTME-VPSGKGYLRVTP 607
+G IK ++++G SW +L SHPAD+TPVCTTELG +++ EF KR+VK+ A+SCD ESH+GWI DIK H + FP +IAD DR +A LGM+ PD A+G+P+T R V++I P+K LKL+L YPA+TGRNFDEI+R +DSLQLTA + +ATPADW+ GG CMVLPTV PE+AA+ FP+ T E +PSGKGY+R TP
Sbjct: 17 EGKIKFYEFIGDSWAILFSHPADYTPVCTTELGRVSEI---APEFAKRNVKLCALSCDSAESHKGWIEDIKHHVKSKAKFPYPIIADEDRDLAVKLGMIDPDEKDAQGMPLTARAVFIIGPDKKLKLSLLYPATTGRNFDEILRVVDSLQLTAEKKVATPADWKSGGDCMVLPTVKPEEAAKLFPKGVTTEDMPSGKGYMRFTP 217
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: UPI0009E4807C (peroxiredoxin-6-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4807C) HSP 1 Score: 254 bits (649), Expect = 2.620e-79 Identity = 121/204 (59.31%), Postives = 153/204 (75.00%), Query Frame = 2
Query: 5 QGPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGH--EVNFPLIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEH-KTMEVPSGKGYLRVTP 607
QG I+ H+Y+ SW +L SHPAD+TPVCTTELG A L E F KR VK++A+SCD +ESH+GWI DI + + E +P+IAD R +A LGM+ PD A+GLP+T R V++I P+K LKL+L YPA+TGRNFDEI+R IDSLQLTAT+ +ATPADW+ GG CMVLPTV PED A+ FP+ KT ++PSGKGY+R TP
Sbjct: 17 QGEIQFHEYIKDSWAILFSHPADYTPVCTTELGRVANLLEE---FKKRGVKLIALSCDGVESHKGWIKDIMFESNYNGEFPYPIIADEGRDLAVKLGMIDPDEKDAQGLPLTARAVFIIGPDKRLKLSLLYPATTGRNFDEILRVIDSLQLTATKKVATPADWKAGGDCMVLPTVKPEDVAKLFPKGVKTKDMPSGKGYMRYTP 217
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: A0A6A0GX74_HYAAZ (Thioredoxin peroxidase-like 3 n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0GX74_HYAAZ) HSP 1 Score: 254 bits (648), Expect = 3.140e-79 Identity = 119/200 (59.50%), Postives = 149/200 (74.50%), Query Frame = 2
Query: 8 GPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTG-HEVNFPLIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTMEVPSGKGYLRVT 604
G IK HD+LG SWG+L SHP D+TPVCTTELG A L +F KR K++A+SCD L+ H GWI DIKA+ E +P+IAD R++A LGM+ PD A+G+P T R V+V+ P+K LKL++ YPA+TGRNFDEI+RA+DSLQLTAT+ +ATPADW KG +CMVLP+VSP+DA + FPEH VPSGK YLR T
Sbjct: 18 GKIKFHDWLGESWGILFSHPRDYTPVCTTELGRAAAL---APQFEKRGCKLIALSCDALDDHHGWIEDIKAYNKLSEFPYPIIADDKRALAVQLGMIDPDEQGADGMPYTCRAVFVVGPDKKLKLSMLYPATTGRNFDEILRALDSLQLTATQKVATPADWTKGSACMVLPSVSPDDAKQLFPEHVCHPVPSGKTYLRTT 214
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: M1XMN8_9METZ (Alkyl hydroperoxide reductase n=1 Tax=Sycon ciliatum TaxID=27933 RepID=M1XMN8_9METZ) HSP 1 Score: 254 bits (648), Expect = 3.580e-79 Identity = 119/203 (58.62%), Postives = 148/203 (72.91%), Query Frame = 2
Query: 5 QGPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGH--EVNFPLIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPEHKTMEVPSGKGYLRVTP 607
+G I H +LG SWG+L SHPADFTPVCTTELG ++N EF KR+VK +A+SCDP++ H WI DI+A++ + +P+IAD R +A GML PD G+P+T R V++I P+K LKL+L YPASTGRNFDEIIR IDSLQLTA + +ATP +WQ GG CMVLP+V PEDA FPEH T E+PSGKGY+R TP
Sbjct: 18 KGSISFHSFLGDSWGILFSHPADFTPVCTTELG---RVNQLLAEFEKRNVKPIALSCDPVDKHSDWIKDIQAYSAQSGDWGYPIIADEQRELAVRFGMLDPDEKDKAGMPLTARCVFIIGPDKKLKLSLLYPASTGRNFDEIIRVIDSLQLTAYKKVATPVNWQPGGECMVLPSVKPEDAKTLFPEHYTKELPSGKGYMRFTP 217
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Match: A0A1W0A4M4_9STRA (Thioredoxin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4M4_9STRA) HSP 1 Score: 253 bits (647), Expect = 6.610e-79 Identity = 119/202 (58.91%), Postives = 153/202 (75.74%), Query Frame = 2
Query: 5 QGPIKLHDYLGSSWGLLCSHPADFTPVCTTELGTCAKLNVEGGEFPKRDVKMLAISCDPLESHQGWIGDIKAHTGHEVNFPLIADADRSIAASLGMLHPDHMSAEGLPMTVRTVYVISPEKILKLALTYPASTGRNFDEIIRAIDSLQLTATRSLATPADWQKGGSCMVLPTVSPEDAAEKFPE-HKTMEVPSGKGYLRVTP 607
QGP+ L Y WGLLCSHP D+TP+CTTELG A+L+ GEF KR VK++ +SC+ + SHQGWI DI+A++GH+VN+P+IAD +R IA+ LGML D + GLP+TVR+V+V+ P+ +KL LTYPASTGRNF EI+R IDSLQLT+ S ATP +W KG ++PTVS EDAA KFP+ ++ E+PSGKGYLR TP
Sbjct: 23 QGPLSLKQYFDGQWGLLCSHPDDYTPICTTELGELARLD-NLGEFSKRHVKVIGLSCNDVNSHQGWIKDIEAYSGHQVNYPIIADKNRVIASELGMLSSDDLDKAGLPLTVRSVFVLGPDLSIKLTLTYPASTGRNFVEILRVIDSLQLTSNYSCATPVNWVKGEKACIVPTVSNEDAAHKFPKGYEIEELPSGKGYLRFTP 223 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig149.2856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig149.2856.1 >prot_E-siliculosus-1a_F_contig149.2856.1 ID=prot_E-siliculosus-1a_F_contig149.2856.1|Name=mRNA_E-siliculosus-1a_F_contig149.2856.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=153bp MLAISCDPLESHQGWIGDIKAHTGHEVNFPLIADADRSIAASLGMLHPDHback to top mRNA from alignment at E-siliculosus-1a_F_contig149:59517..62966+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig149.2856.1 ID=mRNA_E-siliculosus-1a_F_contig149.2856.1|Name=mRNA_E-siliculosus-1a_F_contig149.2856.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3450bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:59517..62966+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig149:59517..62966+ >mRNA_E-siliculosus-1a_F_contig149.2856.1 ID=mRNA_E-siliculosus-1a_F_contig149.2856.1|Name=mRNA_E-siliculosus-1a_F_contig149.2856.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=918bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:59517..62966+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |