mRNA_E-siliculosus-1a_F_contig149.2847.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: A0A6H5JA40_9PHAE (Zpr1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA40_9PHAE) HSP 1 Score: 155 bits (393), Expect = 1.790e-45 Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPRQRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEV 243
V+FGGELQEKGCIFELTVNNA+DLNRQVIKSDFATVTFREMEFQIPPRQRGEVTT+EGLLRTAAEKLGEAQDLRMERSPEV
Sbjct: 95 VIFGGELQEKGCIFELTVNNAKDLNRQVIKSDFATVTFREMEFQIPPRQRGEVTTIEGLLRTAAEKLGEAQDLRMERSPEV 175
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: D8LCC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC8_ECTSI) HSP 1 Score: 158 bits (399), Expect = 6.650e-44 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPRQRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEV 243
VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPRQRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEV
Sbjct: 95 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPRQRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEV 175
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: A0A836CEY4_9STRA (ZPR1 zinc-finger domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY4_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.950e-24 Identity = 51/82 (62.20%), Postives = 69/82 (84.15%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPR-QRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEV 243
V+FGGELQEKGC FELTV ++EDL+RQ+IKSD+A+V F +EF+IPP+ Q+GE+TT+EGLL TAAE+LG Q R++ P++
Sbjct: 48 VLFGGELQEKGCRFELTVKSSEDLDRQIIKSDYASVAFPGIEFEIPPKTQQGEITTIEGLLSTAAERLGYDQAYRVQTDPDL 129
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: A0A7S2XY77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY77_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.350e-24 Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPR-QRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEV 243
V FGGE+QEKGC +T+ EDLNRQVIKSDFAT+TF E++F+IP + QRGE+TTVEG+L TAA+ LG+ Q RME +PEV
Sbjct: 59 VQFGGEIQEKGCKHTVTLTKPEDLNRQVIKSDFATITFPELDFEIPAKTQRGEITTVEGILSTAAKHLGQEQAYRMEVAPEV 140
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: A0A482UGJ0_9ARCH (Zpr1 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UGJ0_9ARCH) HSP 1 Score: 87.0 bits (214), Expect = 2.990e-19 Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPR-QRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEVTIR 252
V FGGE+Q +GCI+ L V + +DLNRQ+IKSD A++ RE++F+IPP Q+GE+ T+EG+L+TAA+ L Q R+ +PEV +R
Sbjct: 91 VTFGGEIQLQGCIYGLKVTHPKDLNRQIIKSDSASLRIREIDFEIPPHTQKGEINTLEGVLKTAAKNLSLYQHERLMGNPEVGLR 175
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: A0A024GIE5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GIE5_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.130e-19 Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPR-QRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEVTIR 252
V FGG +QEKGC E V NA DLNRQ+IK+D ATV F E+EF+IPP+ QRG + T+EGLL+ A E L Q+ R E PE T +
Sbjct: 91 VQFGGTIQEKGCKIEFHVENASDLNRQIIKADTATVFFPELEFEIPPKTQRGTINTIEGLLQKAIENLQMNQEERREIDPETTAK 175
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: A0A7S2RY09_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY09_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 8.360e-19 Identity = 49/82 (59.76%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPR-QRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEV 243
V FGGE+QEKGC F L V++AEDL+RQVIKSD AT+T ++F+IP QRG V+TVEG+L A E L Q+ RME PEV
Sbjct: 73 VTFGGEIQEKGCRFVLRVDSAEDLSRQVIKSDTATITIPSIQFEIPANSQRGGVSTVEGVLSRARENLQMYQEERMEHQPEV 154
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: A0A7S4LNB8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LNB8_9EUGL) HSP 1 Score: 81.6 bits (200), Expect = 6.020e-18 Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPRQRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEV 243
V FGG Q GC++ LT + EDLNR V++SD AT++ E+EF+IPPR GE+TTVEGL+ A E L + Q LR PEV
Sbjct: 42 VQFGGSYQPSGCLYSLTPKDEEDLNRSVVRSDRATISIPELEFEIPPRV-GEITTVEGLVMAALEGLEKGQVLRRAMQPEV 121
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: A0A7S2GHT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHT6_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.480e-16 Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPR-QRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEV 243
V FGGE+Q KGC +ELTV N DL+RQ+IKSD A V +EF+IP + Q+G +T +EG+L T L Q RME+ PEV
Sbjct: 74 VTFGGEIQAKGCRYELTVLNKSDLDRQMIKSDTARVLLPSLEFEIPAQSQKGGITNIEGILSTVLRNLQMYQAERMEQQPEV 155
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Match: A0A6G0XW99_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW99_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 7.870e-16 Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 1 VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPR-QRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEVT 246
V FGG +QEKGC EL+V + EDLNRQ+IKSD AT+ F E++F+IP Q+G + T+EG + A E L E Q+ R PE T
Sbjct: 95 VQFGGTIQEKGCRMELSVQSREDLNRQLIKSDTATILFPEIDFEIPANTQQGTINTIEGFISKAIEGLRENQEERRAIDPETT 177 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig149.2847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig149.2847.1 >prot_E-siliculosus-1a_F_contig149.2847.1 ID=prot_E-siliculosus-1a_F_contig149.2847.1|Name=mRNA_E-siliculosus-1a_F_contig149.2847.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=84bp VVFGGELQEKGCIFELTVNNAEDLNRQVIKSDFATVTFREMEFQIPPRQRback to top mRNA from alignment at E-siliculosus-1a_F_contig149:139..791- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig149.2847.1 ID=mRNA_E-siliculosus-1a_F_contig149.2847.1|Name=mRNA_E-siliculosus-1a_F_contig149.2847.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=653bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:139..791- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig149:139..791- >mRNA_E-siliculosus-1a_F_contig149.2847.1 ID=mRNA_E-siliculosus-1a_F_contig149.2847.1|Name=mRNA_E-siliculosus-1a_F_contig149.2847.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=504bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:139..791- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |