prot_E-siliculosus-1a_F_contig1485.2829.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1485.2829.1
Unique Nameprot_E-siliculosus-1a_F_contig1485.2829.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length769
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1485.2829.1 vs. uniprot
Match: D7FRN3_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN3_ECTSI)

HSP 1 Score: 1074 bits (2777), Expect = 0.000e+0
Identity = 574/633 (90.68%), Postives = 588/633 (92.89%), Query Frame = 0 
Query:  136 MVRLPNTATFGELLACARDKRHGVLELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRPLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMMCGGAQRLGANVTLKECCVSGVPVGGFSPKGWGELRLELHVTECSTRNSLQQVAMKDSSQGWSASEFKGAVGVGLPSRGTDALRSPSQTSHLTPSPPVAATYVPQNNEGSSLTTPSSLLRNGASTVEIRPAVEHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLKRLGARSGDTLIVGYRVGPCAPPEVVRPVVELEGNAAGDDDAQTADVAISPTHSPSHHRPCGAQPGTVHSSGSSNIDGSIPEQGTSGIEAAAAVADGDENXXXXXXXXXXXXXXXXXSGMDVDEPSGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNATSATTSPPSEARPGSEKSGGQRAWWAKRMATRSLKGSRSPDEQGWGATGAAAALRGAVGASSLSASTPSADSTNNSADTPRVRVSPAPAVPVRQNATHGVGRAGGRILRVIGAGGASSMYESPPASAAARRQQRFIPSVGRPKLKVWARWKYGRRVPTPPVPPAGDGGGRG 768
            MVRLPNTATFGELLA AR+KRHG LELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQR LSLTMGPGATIGDVKQRICVDHGIVPSRQGLM+CGGAQRLGANVTLKECCV GVPVGGFSPKGWGELRLELHV EC+TRNSLQ VAM+DSSQGWSASEF+GAVGVGLPSRGTD LRSPSQ SHLTPSPPVAATYVPQNNEGSSLTTPSSL RNGASTVE RP VEHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALL+RLGAR GDTLIVGYRVGP APPEV+RPVVELEGNAAGDDDAQ AD AISPTHSPSHHRPCGAQ GTV SSGSSNIDG IPEQGTSG+E+AAAVADGDEN      XXXXXXXXXXXSGMDVDEP+GAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNA+ AT+SPPSEAR GSEKSGGQRAWWAKRMATRSLKGSRS +EQGWGATGA AALR  VGASSLSASTPSADSTNNSADT RVRVSP PAVPV QNATHGV RAG RILR IGAGGASSMY+SP        QQRFIPSVGRPKLKVWARWKYGRRVPTPPVP AGDGGGRG
Sbjct:    1 MVRLPNTATFGELLARAREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLGANVTLKECCVWGVPVGGFSPKGWGELRLELHVAECTTRNSLQ-VAMRDSSQGWSASEFRGAVGVGLPSRGTDVLRSPSQPSHLTPSPPVAATYVPQNNEGSSLTTPSSLHRNGASTVETRPTVEHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGARGGDTLIVGYRVGPGAPPEVMRPVVELEGNAAGDDDAQNADAAISPTHSPSHHRPCGAQRGTVDSSGSSNIDGGIPEQGTSGVESAAAVADGDENNDVVAPXXXXXXXXXXXSGMDVDEPAGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNASGATSSPPSEARSGSEKSGGQRAWWAKRMATRSLKGSRSSNEQGWGATGATAALRXXVGASSLSASTPSADSTNNSADTRRVRVSPTPAVPVHQNATHGVDRAGVRILRGIGAGGASSMYDSPXXXXXXXXQQRFIPSVGRPKLKVWARWKYGRRVPTPPVPHAGDGGGRG 632
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRN3_ECTSI0.000e+090.68Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 390..451
e-value: 5.4E-8
score: 32.5
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 390..451
score: 10.985
NoneNo IPR availableGENE3D3.10.20.90coord: 376..454
e-value: 1.4E-8
score: 36.4
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 380..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1485contigE-siliculosus-1a_F_contig1485:25976..29744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1485.2829.1mRNA_E-siliculosus-1a_F_contig1485.2829.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1485 25976..29744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1485.2829.1 ID=prot_E-siliculosus-1a_F_contig1485.2829.1|Name=mRNA_E-siliculosus-1a_F_contig1485.2829.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=769bp
MAGDGFVVIVALEPRPLPSLGLDERFTRIDYTAKCTMLDVLEDMARVLRV
PSGDLTLLESAGLEAVDLTHTLSEYHGQHAAPCSSVFAGKRHQWPRYVKR
QRKEINLKVKHTPAPHQLVTCTVEGGKGRNVLRRVMVRLPNTATFGELLA
CARDKRHGVLELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVV
SFPRGSQRPLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMMCGGAQRLG
ANVTLKECCVSGVPVGGFSPKGWGELRLELHVTECSTRNSLQQVAMKDSS
QGWSASEFKGAVGVGLPSRGTDALRSPSQTSHLTPSPPVAATYVPQNNEG
SSLTTPSSLLRNGASTVEIRPAVEHGSGPYSTVMFALSPSGRALTLTMAP
TATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLKRLGARSGDTLI
VGYRVGPCAPPEVVRPVVELEGNAAGDDDAQTADVAISPTHSPSHHRPCG
AQPGTVHSSGSSNIDGSIPEQGTSGIEAAAAVADGDENNDVVAPDGGGGG
SGGGGSGMDVDEPSGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNATSA
TTSPPSEARPGSEKSGGQRAWWAKRMATRSLKGSRSPDEQGWGATGAAAA
LRGAVGASSLSASTPSADSTNNSADTPRVRVSPAPAVPVRQNATHGVGRA
GGRILRVIGAGGASSMYESPPASAAARRQQRFIPSVGRPKLKVWARWKYG
RRVPTPPVPPAGDGGGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR000626Ubiquitin_dom