mRNA_E-siliculosus-1a_F_contig14773.2787.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14773.2787.1
Unique NamemRNA_E-siliculosus-1a_F_contig14773.2787.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A0X3YCF2_9GAMM (HTH araC/xylS-type domain-containing protein n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0X3YCF2_9GAMM)

HSP 1 Score: 646 bits (1667), Expect = 8.160e-232
Identity = 325/347 (93.66%), Postives = 333/347 (95.97%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGSAAWQGTDTTLQRAL LIDAG LQQQNQTQLAERLGIS+RYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQL PGAIRR HD+ +P++IRLELSYRPPLAWHTMLQFWQARTLDGIDWV+QQSYGRTFSYQQS GWFEV PK DSSLQLSLHW  KQGLF LVQQLRRLLDLDANMLQIE QLQQHALFSNG+ISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAE V GDKKLFPTPQAVAQS+LEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW
Sbjct:   70 DSAPGSAAWQGTDTTLQRALTLIDAGGLQQQNQTQLAERLGISQRYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLSPGAIRRRHDNTEPDVIRLELSYRPPLAWHTMLQFWQARTLDGIDWVNQQSYGRTFSYQQSVGWFEVTPKTDSSLQLSLHWAGKQGLFGLVQQLRRLLDLDANMLQIEQQLQQHALFSNGIISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAESVNGDKKLFPTPQAVAQSSLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 416          
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A7Y5EMR6_9GAMM (DNA-3-methyladenine glycosylase 2 family protein n=1 Tax=Rheinheimera lutimaris TaxID=2740584 RepID=A0A7Y5EMR6_9GAMM)

HSP 1 Score: 524 bits (1349), Expect = 1.810e-183
Identity = 266/347 (76.66%), Postives = 295/347 (85.01%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGSAAWQG+ TTLQRAL+LID G LQQ +Q  LAERLGISERYLRK+FQQQLGLAPKQYA+TQQVLFAKKLLHETALP+S+IA+QAGFNSVRRFNDAFKQQLQL P AIRR  ++A  + + LELSYRPPLAW  MLQFWQARTLDGIDW   Q YGRTF+Y+   GWF+V P   +SL+L LHW  KQGLF+LVQ +RRLLDLDANML IE QL    LF+ G+ISGLRIPGLW SWEAGVRA+LGQQV+VAGARTQLNRLVQAL EP+  DKKLFPTPQAV  S+L MIKVP ARRDTLKALA FV+A P A PQQWL++KGIGPWTVNYA LRG+S SDIW
Sbjct:   70 DSAPGSAAWQGSQTTLQRALRLIDEGGLQQHSQAALAERLGISERYLRKLFQQQLGLAPKQYALTQQVLFAKKLLHETALPVSSIAFQAGFNSVRRFNDAFKQQLQLNPTAIRRRSNTA-VDALELELSYRPPLAWQKMLQFWQARTLDGIDWTGPQHYGRTFNYRGQPGWFDVAPLTKTSLKLRLHWQGKQGLFNLVQHIRRLLDLDANMLLIEQQLAASPLFAGGIISGLRIPGLWDSWEAGVRAVLGQQVNVAGARTQLNRLVQALGEPLDADKKLFPTPQAVLDSDLLMIKVPNARRDTLKALAQFVIAQPQAEPQQWLALKGIGPWTVNYAKLRGMSDSDIW 415          
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: UPI0019D4F6DA (helix-turn-helix domain-containing protein n=1 Tax=Rheinheimera pleomorphica TaxID=2703963 RepID=UPI0019D4F6DA)

HSP 1 Score: 521 bits (1343), Expect = 1.530e-182
Identity = 266/348 (76.44%), Postives = 297/348 (85.34%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSA-DPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGSAAWQGTDTTLQRAL+LID G LQQQ+Q  LAERLGISERYLRK+FQQQLG+APKQYA+ QQVLFAKKLLHETALP+S++A+QAGFNSVRRFNDAFKQQL L P  IRR H  A DP  ++L LSYRPPLAW  ML FWQ RTLDGIDWV  Q YGRTFS+ Q AGWFEV P   ++L L LHWP KQGLF+L++QLRRLLDLDANMLQIE QL    LF+  +ISGLRIPG+W SWEAGVRAILGQQVSVAGARTQLNRLVQAL EP+  DK+LFPTPQA+  ++L+MIKVPQARRDTLKALA  V++ PDA+P+ WLSIKGIGPWTV+YA LRGLS SDIW
Sbjct:   71 DSAPGSAAWQGTDTTLQRALRLIDEGGLQQQSQQLLAERLGISERYLRKLFQQQLGMAPKQYALMQQVLFAKKLLHETALPVSSVAFQAGFNSVRRFNDAFKQQLNLSPLQIRRQHHCAGDP--LQLSLSYRPPLAWPQMLAFWQQRTLDGIDWVTDQRYGRTFSFMQQAGWFEVAPGTANNLTLQLHWPGKQGLFTLLRQLRRLLDLDANMLQIEQQLCSQPLFNGSIISGLRIPGVWNSWEAGVRAILGQQVSVAGARTQLNRLVQALGEPLYHDKRLFPTPQALLNNDLQMIKVPQARRDTLKALAQAVISQPDAAPEHWLSIKGIGPWTVSYARLRGLSDSDIW 416          
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: UPI00196A14AF (helix-turn-helix domain-containing protein n=1 Tax=Rheinheimera baltica TaxID=67576 RepID=UPI00196A14AF)

HSP 1 Score: 518 bits (1333), Expect = 4.900e-181
Identity = 256/347 (73.78%), Postives = 297/347 (85.59%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGSAAWQGT+TTLQRAL+LID G LQQQNQ++LA RLGISERYLRK+FQQQLGL+PKQYA+ QQVLFAKKLLHET +PIS+IA+QAGFNSVRRFNDAFKQQL+L P  IRR + +  P  ++L LSYRPPLAW  ML FW+ RTLDGID V+ Q YGRTF++ Q  GWFE+ P   +SL+L +HW  KQGLF L+ Q+RRLLDLDANMLQIE QL +H LFSNG+I GLRIPG+W SWEAGVRA+LGQQVSVAGARTQLNRL+QAL +P   D++LFPTPQ+V QS+L+MIKVPQARR+TL+ALA FVM  PDA+P+QWL IKGIGPWTV+YA LRGLS SDIW
Sbjct:   70 DSAPGSAAWQGTNTTLQRALRLIDDGCLQQQNQSELASRLGISERYLRKLFQQQLGLSPKQYALAQQVLFAKKLLHETVMPISSIAFQAGFNSVRRFNDAFKQQLKLSPLTIRRANKTT-PNTLQLSLSYRPPLAWQQMLDFWRDRTLDGIDSVNGQCYGRTFTFLQQPGWFEISPGQHNSLRLEVHWNGKQGLFKLINQIRRLLDLDANMLQIEQQLSRHTLFSNGIIPGLRIPGVWDSWEAGVRAVLGQQVSVAGARTQLNRLIQALGQPQPADRRLFPTPQSVVQSDLQMIKVPQARRETLRALAQFVMENPDAAPEQWLPIKGIGPWTVSYARLRGLSDSDIW 415          
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A0M2V694_9GAMM (HTH araC/xylS-type domain-containing protein n=2 Tax=Arsukibacterium ikkense TaxID=336831 RepID=A0A0M2V694_9GAMM)

HSP 1 Score: 499 bits (1286), Expect = 9.590e-174
Identity = 255/347 (73.49%), Postives = 282/347 (81.27%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGSAAW GT TTL RAL+LI  G LQQQNQ QLAERLGIS+RYLRK+F+QQLGL P QYA+  QVLFAKKLLHET L I++IAYQAGFNSVRRFNDAF +QLQL P AIRR     +   I LELSYRPPLAW+ ML FWQARTLDGIDWV  Q YGRTF Y +  GWFEV PK  SSL L+LHWP +QGL  LVQ LRRLLDLDANMLQIE QL +H LFS  ++SGLRIPGLW SWEAGVRAILGQQVSVAGAR+QLNRLVQAL   V  DK+LFPTPQAV  S+L+MIKVP  RR TL+ LA  ++A PDA+P+QWL+IKGIGPWTVNYA +RGL  SDIW
Sbjct:   78 DSAPGSAAWHGTHTTLYRALRLIAEGGLQQQNQQQLAERLGISDRYLRKLFRQQLGLTPTQYALHSQVLFAKKLLHETQLSITSIAYQAGFNSVRRFNDAFGKQLQLSPSAIRRQRQPVNGNGIELELSYRPPLAWNEMLSFWQARTLDGIDWVADQRYGRTFDYLEQPGWFEVCPKTSSSLTLTLHWPGQQGLAGLVQHLRRLLDLDANMLQIEQQLSRHPLFSRALLSGLRIPGLWNSWEAGVRAILGQQVSVAGARSQLNRLVQALGALVGTDKRLFPTPQAVLASDLQMIKVPALRRQTLQHLATLLLAEPDATPEQWLNIKGIGPWTVNYAQMRGLGHSDIW 424          
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: UPI001C311D20 (helix-turn-helix domain-containing protein n=1 Tax=Rheinheimera sp. SM2107 TaxID=2848612 RepID=UPI001C311D20)

HSP 1 Score: 498 bits (1283), Expect = 2.080e-173
Identity = 248/347 (71.47%), Postives = 285/347 (82.13%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGSAAWQGT TTL RA++LID GALQQQ+Q +LA RLGIS+RYLRK+FQQQ+GL P QYA++QQVLFAKKLLHET L I+ IAYQAGF SVRRFNDAF +QL+L P AIRR  +      ++LELSYRPPLAW  ML FWQARTL GIDWV+   YGRTFSY Q  GWFEV P+ D+SL L LHWP   GL +LVQQLRRLLDLDAN+LQIE QL  H+ FS G+I+GLRIPGLW +WEAGVRA+LGQQVSVAGARTQLNRLVQAL  P+  +K+LFP+PQAV  S+L+MIKVP  RR TL+ LA FV+A PDA+P+ WLSIKGIGPWTVNYA +RGL  S+IW
Sbjct:   70 DSAPGSAAWQGTHTTLHRAMRLIDEGALQQQSQAELAARLGISDRYLRKLFQQQMGLTPTQYALSQQVLFAKKLLHETQLAITNIAYQAGFQSVRRFNDAFVKQLRLNPSAIRRQREHVAGNSLQLELSYRPPLAWQQMLAFWQARTLTGIDWVEGNCYGRTFSYLQQPGWFEVSPQTDNSLGLKLHWPGSTGLGALVQQLRRLLDLDANLLQIEQQLANHSFFSRGLINGLRIPGLWSTWEAGVRAVLGQQVSVAGARTQLNRLVQALGAPINAEKRLFPSPQAVLDSDLQMIKVPALRRQTLRDLAAFVLAEPDAAPESWLSIKGIGPWTVNYARMRGLGDSNIW 416          
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: UPI0019650994 (helix-turn-helix domain-containing protein n=1 Tax=unclassified Rheinheimera TaxID=115860 RepID=UPI0019650994)

HSP 1 Score: 498 bits (1283), Expect = 2.150e-173
Identity = 249/350 (71.14%), Postives = 294/350 (84.00%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDK---KLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGSAAWQG++TTLQRA++LID G LQQQ Q  LA RLGI+ERYLRK+FQQ LG+ PKQYA+ QQVLFAKKLLHET +P++ IA+ AGFNSVRRFNDAFKQQL+L P  IRR  + A  ++++L LSYRPPLAW  ML FW+ARTL+GIDWVD Q YGRTFS+ Q  GWF V+P A+++L+L LHWP +QGLFSLVQ LRRLLDLDAN+L IE QL  H LFS G+ISGLRIPG+W SWEAGVRA+LGQQVSVAGARTQLNRLVQAL +P+  D    +LFP+PQA+A S+L+MIKVPQARRDTLKALA FV+   DA+P+ WL+IKGIGPWTV+YA LRGLS +D+W
Sbjct:   70 DSAPGSAAWQGSNTTLQRAIRLIDDGGLQQQTQHDLACRLGITERYLRKLFQQHLGMPPKQYALAQQVLFAKKLLHETTMPVNHIAFHAGFNSVRRFNDAFKQQLKLSPLNIRR-QNKASGDMLQLTLSYRPPLAWQQMLDFWRARTLEGIDWVDAQRYGRTFSFMQQPGWFVVEPAANNNLKLQLHWPGEQGLFSLVQHLRRLLDLDANLLHIEQQLTSHPLFSQGIISGLRIPGVWSSWEAGVRAVLGQQVSVAGARTQLNRLVQALGKPLETDGMSIRLFPSPQALASSDLQMIKVPQARRDTLKALAQFVLQQSDAAPEHWLAIKGIGPWTVSYARLRGLSDTDVW 418          
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A486XSI1_9GAMM (ADA regulatory protein n=1 Tax=Rheinheimera sp. BAL341 TaxID=1708203 RepID=A0A486XSI1_9GAMM)

HSP 1 Score: 498 bits (1282), Expect = 2.750e-173
Identity = 249/347 (71.76%), Postives = 289/347 (83.29%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGSAAWQGT+T LQRA++LIDAG LQQQ+Q +LA RLGISERYLRK+F +QLG+ PKQYAITQQVLFAKKLLHET++P+S IA+QAGFNSVRRFNDAFK+QLQL P  IRRG  S +  L  L LSYRPPLAW  ML FW+ARTLDG+DWV  Q YGR+FS+ Q AGWFEV P  D++L L L+WP + GLFSLV+Q+RRLLDLDANMLQIE  L  H LF  G+++GLRIPG+W SWEAGVRAILGQQVSVA ARTQLNRLVQAL EP+  D++LFPTP AV  S+L+MIK+P ARR+TLKALA  ++  PDA+  QWL+IKGIGPWTVNYA LRG S +DIW
Sbjct:   70 DSAPGSAAWQGTNTALQRAIRLIDAGDLQQQSQAELANRLGISERYLRKLFTEQLGMPPKQYAITQQVLFAKKLLHETSMPVSHIAFQAGFNSVRRFNDAFKRQLQLSPLQIRRGKVSRNKGL-ELTLSYRPPLAWQQMLGFWRARTLDGVDWVAGQQYGRSFSFMQQAGWFEVAPARDNNLLLQLYWPGQHGLFSLVRQIRRLLDLDANMLQIEQHLSCHPLFQRGIVNGLRIPGVWDSWEAGVRAILGQQVSVAAARTQLNRLVQALGEPITADRRLFPTPTAVLNSDLQMIKLPDARRNTLKALAQAILQQPDAAADQWLTIKGIGPWTVNYAKLRGQSDTDIW 415          
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A285J284_9GAMM (DNA-3-methyladenine glycosylase II n=1 Tax=Rheinheimera tuosuensis TaxID=1323745 RepID=A0A285J284_9GAMM)

HSP 1 Score: 493 bits (1268), Expect = 3.940e-171
Identity = 252/347 (72.62%), Postives = 281/347 (80.98%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGSAAWQGT TTLQRAL+LID GALQQ  Q  LA RLGI++RYLRK+FQQQLGL P QYA++Q+VLFAKKLLHET L I+ IAYQAGFNSVRRFNDAF +QL+L P AIRR         ++L+LSYRPP+AW  ML FWQARTL GIDWV+ Q YGRTF+Y Q  GWFEV+PK   SL L+LHWP + GL  LVQ LRR+LDLDANMLQIE QL  H LFS+G+I GLRIPGLW SWEAGVRAILGQQVSVAGARTQLNRLVQAL   VA  K+LFPTPQAV  S+L MIKVP  RR TL  LA FV+A PDA+P++WLSIKGIGPWTVNYA +RGL  SDIW
Sbjct:   70 DSAPGSAAWQGTQTTLQRALRLIDEGALQQHTQAALATRLGITDRYLRKLFQQQLGLTPTQYALSQKVLFAKKLLHETDLAITDIAYQAGFNSVRRFNDAFVRQLRLNPSAIRRHRPKTAGNGLQLDLSYRPPMAWDDMLAFWQARTLTGIDWVEGQRYGRTFNYLQHTGWFEVQPKTACSLLLTLHWPGRHGLSGLVQHLRRVLDLDANMLQIEQQLASHPLFSSGLIHGLRIPGLWNSWEAGVRAILGQQVSVAGARTQLNRLVQALGVTVAEQKRLFPTPQAVLASDLAMIKVPALRRQTLHDLAAFVLAEPDAAPERWLSIKGIGPWTVNYARMRGLGDSDIW 416          
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A2E6Z983_9GAMM (HTH araC/xylS-type domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2E6Z983_9GAMM)

HSP 1 Score: 490 bits (1261), Expect = 4.560e-170
Identity = 248/347 (71.47%), Postives = 280/347 (80.69%), Query Frame = 1
Query:    1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
            DSAPGS AWQGT TTLQRAL+LID G+LQQ  Q  LA RLGI++RYLRK+FQQQLG+ P QYA+ QQVLFAKKLLHET LP+S IAYQAGFNSVRRFNDAF +QL+L P AIRR H       ++LELSYRPPLAW +ML FWQARTL G++WV+   YGRTFSY Q AGWFEV PK  SSL L+LHW  ++GL SLVQ+LRRLLDLD NMLQIE QL  H LF+  ++SGLRIPGLW +WEAGVRAILGQQVSVAGARTQLNRLVQ L   V  DK+LFPTP+AV  S L MIKVP  RR TL+ LA FV+A P+ASP+QWL IKGIGPWTV+YA +RG S SDIW
Sbjct:   70 DSAPGSPAWQGTQTTLQRALRLIDEGSLQQHTQADLALRLGITDRYLRKLFQQQLGVTPTQYALNQQVLFAKKLLHETHLPVSCIAYQAGFNSVRRFNDAFVKQLRLNPSAIRRHHPEHANNGLKLELSYRPPLAWDSMLTFWQARTLTGVEWVEADRYGRTFSYLQHAGWFEVAPKTASSLTLTLHWSGRRGLSSLVQKLRRLLDLDTNMLQIEQQLASHPLFTEQLLSGLRIPGLWNTWEAGVRAILGQQVSVAGARTQLNRLVQELGTAVTDDKRLFPTPEAVFASQLAMIKVPALRRQTLRDLAAFVLAQPEASPEQWLDIKGIGPWTVSYAKMRGQSDSDIW 416          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0X3YCF2_9GAMM8.160e-23293.66HTH araC/xylS-type domain-containing protein n=5 T... [more]
A0A7Y5EMR6_9GAMM1.810e-18376.66DNA-3-methyladenine glycosylase 2 family protein n... [more]
UPI0019D4F6DA1.530e-18276.44helix-turn-helix domain-containing protein n=1 Tax... [more]
UPI00196A14AF4.900e-18173.78helix-turn-helix domain-containing protein n=1 Tax... [more]
A0A0M2V694_9GAMM9.590e-17473.49HTH araC/xylS-type domain-containing protein n=2 T... [more]
UPI001C311D202.080e-17371.47helix-turn-helix domain-containing protein n=1 Tax... [more]
UPI00196509942.150e-17371.14helix-turn-helix domain-containing protein n=1 Tax... [more]
A0A486XSI1_9GAMM2.750e-17371.76ADA regulatory protein n=1 Tax=Rheinheimera sp. BA... [more]
A0A285J284_9GAMM3.940e-17172.62DNA-3-methyladenine glycosylase II n=1 Tax=Rheinhe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14773contigE-siliculosus-1a_F_contig14773:2..1042 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1041
Model size1041
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko03000,ko03400
Best eggNOG OGNA|NA|NA
Best tax levelChromatiales
COG Functional cat.K
EC3.2.2.21
EggNOG OGs1QTXM@1224,1RNQB@1236,1WZF5@135613,COG0122@1,COG0122@2,COG2169@1,COG2169@2
EggNOG free text desc.AlkA N-terminal domain
GOsGO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003905,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008725,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0032131,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0043733,GO:0043916,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363
KEGG Pathwayko03410,map03410
KEGG koko:K01247,ko:K13529,ko:K15051
Preferred namealkA
Seed eggNOG ortholog1123053.AUDG01000003_gene2704
Seed ortholog evalue6.5e-145
Seed ortholog score520.4
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927986.4817905-CDS-E-siliculosus-1a_F_contig14773:1..10421622927986.4817905-CDS-E-siliculosus-1a_F_contig14773:1..1042Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14773 2..1042 -
1696318764.0354385-CDS-E-siliculosus-1a_F_contig14773:1..10421696318764.0354385-CDS-E-siliculosus-1a_F_contig14773:1..1042Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14773 2..1042 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14773.2787.1prot_E-siliculosus-1a_F_contig14773.2787.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14773 2..1042 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14773.2787.1

>prot_E-siliculosus-1a_F_contig14773.2787.1 ID=prot_E-siliculosus-1a_F_contig14773.2787.1|Name=mRNA_E-siliculosus-1a_F_contig14773.2787.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=347bp
DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKM
FQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDA
FKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDG
IDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQ
LRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILG
QQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQAR
RDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW
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mRNA from alignment at E-siliculosus-1a_F_contig14773:2..1042-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14773.2787.1 ID=mRNA_E-siliculosus-1a_F_contig14773.2787.1|Name=mRNA_E-siliculosus-1a_F_contig14773.2787.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1041bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14773:2..1042- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GACAGTGCGCCTGGCTCTGCCGCCTGGCAAGGTACAGATACGACCTTGCA ACGCGCCTTAAAACTGATTGATGCAGGCGCATTACAACAACAAAACCAGA CACAGCTGGCAGAGCGTCTTGGCATAAGTGAGCGTTACCTGCGCAAAATG TTTCAGCAGCAACTGGGGCTGGCGCCAAAACAGTATGCCATTACCCAGCA AGTGTTATTTGCCAAAAAACTGCTGCATGAAACGGCTCTGCCTATCAGTG CCATTGCTTATCAGGCTGGTTTTAACAGTGTTCGGCGCTTTAACGATGCC TTTAAACAACAGCTACAACTTATCCCCGGCGCTATTCGTCGAGGCCATGA CAGCGCTGATCCGGAACTGATCCGGCTGGAGCTTAGTTACCGCCCGCCAC TGGCCTGGCACACTATGCTGCAGTTCTGGCAGGCGCGCACGCTGGACGGT ATCGATTGGGTAGATCAGCAAAGCTATGGCCGCACGTTTAGCTATCAGCA GAGTGCAGGCTGGTTTGAAGTAAAGCCCAAAGCGGACAGCAGTTTACAGC TGAGCCTACACTGGCCCGCTAAACAAGGGCTGTTTAGTCTGGTGCAGCAA CTACGCCGCCTGTTGGATCTGGATGCCAATATGCTGCAGATAGAGCACCA GCTGCAGCAGCATGCCTTATTTAGCAACGGCATGATCAGCGGCCTGCGTA TTCCCGGTTTATGGTGCAGCTGGGAAGCGGGTGTCAGGGCCATACTGGGG CAGCAAGTCAGTGTTGCCGGCGCCCGCACCCAGCTTAATCGTTTGGTACA GGCGTTGGCTGAGCCCGTAGCCGGTGACAAAAAACTGTTCCCTACCCCGC AGGCCGTAGCGCAAAGCAATCTGGAAATGATAAAAGTACCGCAGGCCCGC CGCGATACCCTAAAAGCCCTGGCGCACTTTGTTATGGCAACACCTGACGC ATCACCGCAGCAATGGCTCAGCATTAAAGGCATCGGCCCCTGGACGGTAA ATTACGCCTGCCTGCGCGGTTTGTCTGCCAGTGATATCTGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14773:2..1042-

>mRNA_E-siliculosus-1a_F_contig14773.2787.1 ID=mRNA_E-siliculosus-1a_F_contig14773.2787.1|Name=mRNA_E-siliculosus-1a_F_contig14773.2787.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2082bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14773:2..1042- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GACAGTGCGCCTGGCTCTGCCGCCTGGCAAGGTACAGATACGACCTTGCA
ACGCGCCTTAAAACTGATTGATGCAGGCGCATTACAACAACAAAACCAGA
CACAGCTGGCAGAGCGTCTTGGCATAAGTGAGCGTTACCTGCGCAAAATG
TTTCAGCAGCAACTGGGGCTGGCGCCAAAACAGTATGCCATTACCCAGCA
AGTGTTATTTGCCAAAAAACTGCTGCATGAAACGGCTCTGCCTATCAGTG
CCATTGCTTATCAGGCTGGTTTTAACAGTGTTCGGCGCTTTAACGATGCC
TTTAAACAACAGCTACAACTTATCCCCGGCGCTATTCGTCGAGGCCATGA
CAGCGCTGATCCGGAACTGATCCGGCTGGAGCTTAGTTACCGCCCGCCAC
TGGCCTGGCACACTATGCTGCAGTTCTGGCAGGCGCGCACGCTGGACGGT
ATCGATTGGGTAGATCAGCAAAGCTATGGCCGCACGTTTAGCTATCAGCA
GAGTGCAGGCTGGTTTGAAGTAAAGCCCAAAGCGGACAGCAGTTTACAGC
TGAGCCTACACTGGCCCGCTAAACAAGGGCTGTTTAGTCTGGTGCAGCAA
CTACGCCGCCTGTTGGATCTGGATGCCAATATGCTGCAGATAGAGCACCA
GCTGCAGCAGCATGCCTTATTTAGCAACGGCATGATCAGCGGCCTGCGTA
TTCCCGGTTTATGGTGCAGCTGGGAAGCGGGTGTCAGGGCCATACTGGGG
CAGCAAGTCAGTGTTGCCGGCGCCCGCACCCAGCTTAATCGTTTGGTACA
GGCGTTGGCTGAGCCCGTAGCCGGTGACAAAAAACTGTTCCCTACCCCGC
AGGCCGTAGCGCAAAGCAATCTGGAAATGATAAAAGTACCGCAGGCCCGC
CGCGATACCCTAAAAGCCCTGGCGCACTTTGTTATGGCAACACCTGACGC
ATCACCGCAGCAATGGCTCAGCATTAAAGGCATCGGCCCCTGGACGGTAA
ATTACGCCTGCCTGCGCGGTTTGTCTGCCAGTGATATCTGGGACAGTGCG
CCTGGCTCTGCCGCCTGGCAAGGTACAGATACGACCTTGCAACGCGCCTT
AAAACTGATTGATGCAGGCGCATTACAACAACAAAACCAGACACAGCTGG
CAGAGCGTCTTGGCATAAGTGAGCGTTACCTGCGCAAAATGTTTCAGCAG
CAACTGGGGCTGGCGCCAAAACAGTATGCCATTACCCAGCAAGTGTTATT
TGCCAAAAAACTGCTGCATGAAACGGCTCTGCCTATCAGTGCCATTGCTT
ATCAGGCTGGTTTTAACAGTGTTCGGCGCTTTAACGATGCCTTTAAACAA
CAGCTACAACTTATCCCCGGCGCTATTCGTCGAGGCCATGACAGCGCTGA
TCCGGAACTGATCCGGCTGGAGCTTAGTTACCGCCCGCCACTGGCCTGGC
ACACTATGCTGCAGTTCTGGCAGGCGCGCACGCTGGACGGTATCGATTGG
GTAGATCAGCAAAGCTATGGCCGCACGTTTAGCTATCAGCAGAGTGCAGG
CTGGTTTGAAGTAAAGCCCAAAGCGGACAGCAGTTTACAGCTGAGCCTAC
ACTGGCCCGCTAAACAAGGGCTGTTTAGTCTGGTGCAGCAACTACGCCGC
CTGTTGGATCTGGATGCCAATATGCTGCAGATAGAGCACCAGCTGCAGCA
GCATGCCTTATTTAGCAACGGCATGATCAGCGGCCTGCGTATTCCCGGTT
TATGGTGCAGCTGGGAAGCGGGTGTCAGGGCCATACTGGGGCAGCAAGTC
AGTGTTGCCGGCGCCCGCACCCAGCTTAATCGTTTGGTACAGGCGTTGGC
TGAGCCCGTAGCCGGTGACAAAAAACTGTTCCCTACCCCGCAGGCCGTAG
CGCAAAGCAATCTGGAAATGATAAAAGTACCGCAGGCCCGCCGCGATACC
CTAAAAGCCCTGGCGCACTTTGTTATGGCAACACCTGACGCATCACCGCA
GCAATGGCTCAGCATTAAAGGCATCGGCCCCTGGACGGTAAATTACGCCT
GCCTGCGCGGTTTGTCTGCCAGTGATATCTGG
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