mRNA_E-siliculosus-1a_F_contig1477.2785.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1477.2785.1
Unique NamemRNA_E-siliculosus-1a_F_contig1477.2785.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A1V9Z3Y0_9STRA (PIH1_CS domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3Y0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.860e-38
Identity = 83/202 (41.09%), Postives = 121/202 (59.90%), Query Frame = 1
Query:    1 MAGGADLIALSDLLQGAGQDDQDERAHADQAQGK--FFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIV-EAEW 597
            M+  +DL+ALSDLL       + E  H D+ Q K  F TPG    P +P+     +     G P +K       DP+AIW E+E +  D    + +D R +P+++ +YKQ VMTED FLG+  K P +  C  +VVK+VFPG ++R+++LDV  +  +A S +L+L+TYLP+PV   +G AKWD   +TL VTLPIV + +W
Sbjct:    1 MSAFSDLLALSDLL-------RSEETHDDEHQRKQAFVTPGSIASPALPKGGIIDQ-----GFPLIK------KDPKAIWDEDE-VGSDAEDEEDSDDRKRPKHEILYKQDVMTEDVFLGLGDKDPSTAHCDAMVVKIVFPGHKLREIDLDVKAQKLVAQSSRLKLSTYLPYPVKHKEGKAKWDPKTDTLIVTLPIVRDDDW 183          
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A7S2BY64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BY64_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.600e-37
Identity = 65/128 (50.78%), Postives = 86/128 (67.19%), Query Frame = 1
Query:  217 DPQAIWSEEEALEQDDAFF-DPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
            DP+ IW E+E   ++     D  D RP+P+Y+ ++KQ VM+ED FLGM  KTPGS DCTH+ +++ FPG  M+DL+LDVT +   A SP++ LA YLP PVD  +G AKWD   E L +TLPI   EW
Sbjct:  118 DPKDIWDEDEVPTEEAILVEDMEDARPRPKYEILFKQDVMSEDVFLGMGEKTPGSSDCTHMTIRIQFPGHTMKDLDLDVTTQKLRAESPRMLLAIYLPLPVDSDRGSAKWDTKKEMLIITLPIKRDEW 245          
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A329S0T5_9STRA (PIH1_CS domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329S0T5_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.200e-34
Identity = 83/197 (42.13%), Postives = 117/197 (59.39%), Query Frame = 1
Query:   10 GADLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDF-GPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
            G +L+AL+DLL G  QD QD+  + +Q Q +  TP    G  ++PE        R  G  R +       DP+AIWS +E +  DD   D  + R +P+++ +YKQSVMTED FLG++ K P S  C  +VV+V  P  R+ DLELDV R+  L  S KL+L   LP+PV   +G AKWD  +++LS++LPI+  EW
Sbjct:    5 GNELLALNDLLTGI-QDAQDD--YEEQNQAQQVTPYTLNGAAKLPE------VTRPIGQIRQE-------DPKAIWSIDE-VPSDDEDDDSFETRARPKFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVECPDHRLEDLELDVKRQKLLLLSSKLKLVLSLPYPVRHLEGQAKWDHKSQSLSISLPIIRDEW 184          
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A7S2S1L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1L9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.380e-34
Identity = 66/128 (51.56%), Postives = 82/128 (64.06%), Query Frame = 1
Query:  217 DPQAIWSEEEALEQDDAFFDPT-DKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
            DP+ IW E+E   ++    +   D R +P Y+ ++KQ+V T+D FLG   KTPGS DCTHIV+K VFP   MRDL LDVT+    A S  + L+ YLP PVD   G AKWDA  E+L VTLPIV  EW
Sbjct:   87 DPKDIWDEDEVPPEEAILSEEIHDGRQRPRYEVLFKQAVGTQDVFLGTGDKTPGSVDCTHIVIKAVFPSHSMRDLHLDVTKNKIRAESKSMLLSMYLPLPVDPDHGSAKWDAKKESLIVTLPIVRDEW 214          
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A8K1FGL0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGL0_PYTOL)

HSP 1 Score: 126 bits (316), Expect = 3.940e-33
Identity = 82/200 (41.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    1 MAGG-ADLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
            M GG A+++ALSDLL     D  D + H D  Q    TP                   AP   R      KP D +AIW  EE +  DD   D  D R +P ++ +YKQSVMTED FLG++ K P S  C  +VV+V  P  R+ D+ELDV ++  L  S  L+L+ YLP+PV    G A+WDA  +TLS+ LPI+  EW
Sbjct:    1 MEGGMAEILALSDLLANC-NDSDDYQEHDDVRQTPMITPASM------------TGHSAPVVDRP-IGQIKPVDSKAIWLPEE-VPSDDEDDDTFDTRRRPTFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVDCPKHRLEDIELDVKKQKLLLHSSTLKLSLYLPYPVRYQDGQAQWDAVKQTLSIRLPIIRDEW 185          
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A482SSY8_9ARCH (PIH1_CS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSY8_9ARCH)

HSP 1 Score: 125 bits (314), Expect = 9.290e-33
Identity = 62/122 (50.82%), Postives = 84/122 (68.85%), Query Frame = 1
Query:  229 IWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAE 594
            IW+E+E +  +DA  +  D RP P ++  YKQS+ TEDTFLG++ KTP + DCTHIV+K+ FPG  MR+L+LDV+    +AAS   RL TYLP  VD+  G A +D+  E L+VTLPI+  E
Sbjct:   68 IWAEDE-IPTEDALLNVRDDRPTPRFEISYKQSIGTEDTFLGLSDKTPLTTDCTHIVIKIHFPGSSMRELDLDVSSNRIMAASRTHRLFTYLPADVDDANGKAAFDSKKEVLTVTLPIIARE 188          
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A6A3YBP0_9STRA (PIH1_CS domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YBP0_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.310e-32
Identity = 83/199 (41.71%), Postives = 107/199 (53.77%), Query Frame = 1
Query:   10 GADLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEAL---EQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
            G +L+AL+DLL G  QD QDE    +Q Q    TP         + P   R                  DP+AIWS +E     E DDAF    + R +P+++ +YKQSVMTED FLG++ K P S  C  +VV+V  P  R+ D+ELDV R+  L  S  L+L  YLP PV   +G AKWD    +LSV+LPIV  EW
Sbjct:    5 GNELLALNDLLTGC-QDAQDEYEE-NQNQLHQITPYTLNGAATAKYPEVTR----------PIGQILQDDPKAIWSMDEVPSDDEDDDAF----ETRSRPQFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVECPDHRLEDIELDVKRQKLLLLSSTLKLVLYLPHPVRHLEGQAKWDHKTHSLSVSLPIVRDEW 187          
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: W4FJZ8_9STRA (PIH1_CS domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJZ8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.850e-32
Identity = 75/194 (38.66%), Postives = 107/194 (55.15%), Query Frame = 1
Query:   16 DLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
            DL+ALSDLLQ A +D++ E        G            IP  P +A  RR             P D +AIW+++E    DD   D  D R +P+Y+ ++KQ VMTED FLG+  K P S +C HI +K+VFPG  + ++ LD+ +R  +A S   +L  Y P PV   +G A WDA  +TL+VT+P+++ EW
Sbjct:    6 DLMALSDLLQPAEEDERHE--------GTLTKTPPMPHANIP-LPKEALNRRI--------GQIVPQDLKAIWTDDEVAGSDDD--DEFDTRTRPKYEVLFKQEVMTEDVFLGLGDKDPSSSNCDHITIKMVFPGHCLDEIGLDLNKRRLVAQSHACKLVLYWPTPVQHKRGRATWDAKTDTLAVTVPMLKDEW 180          
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A833TKV8_PHYIN (PIH1 CS-like domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TKV8_PHYIN)

HSP 1 Score: 123 bits (308), Expect = 6.090e-32
Identity = 76/198 (38.38%), Postives = 109/198 (55.05%), Query Frame = 1
Query:   10 GADLIALSDLLQGA--GQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
            G +L+AL+DLL G    +DD +E+  A Q    +   G   P  +     Q R                  DP+AIWS  E +  DD   D  + R +P+++ +YKQSVMTED FLG++ K P S  C  +VV+V  P  R+ D+ELDV R+  L  S  L+L  +LP+PV   +G AKWD  +++L+V+LPI+  EW
Sbjct:    5 GNELLALNDLLTGIQEAEDDYEEQNRAQQVT-PYTLSGSSKPLEVTRPIGQIRQE----------------DPKAIWSIHE-VPSDDEDDDTFETRARPKFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVECPNHRLEDIELDVKRQKLLLLSSTLKLVLHLPYPVRHLEGQAKWDHKSQSLAVSLPIIRDEW 184          
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A5D6Y4D8_9STRA (PIH1_CS domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4D8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 7.480e-32
Identity = 75/200 (37.50%), Postives = 108/200 (54.00%), Query Frame = 1
Query:    1 MAGGA-DLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
            M GGA D++ALS+L+ G  Q  ++E   A Q +    TP   G              +AP   R      K +DP+AIW+  +          P+D     +++ +YKQSVMTED FLG++ K P   +C  +VV+V  P  R+ D+ELDV +   L  S  L+L+ +LP PV    G AKWD+G +TLS++LPI+  EW
Sbjct:    1 MEGGAGDILALSELITGCQQAFEEEICDAQQRRAPALTPSTIG-----------GAAKAPIVDRP-IGQIKAADPKAIWNLADV---------PSDDEDDTKFEILYKQSVMTEDVFLGLSDKDPSFANCDAMVVRVECPRHRLEDIELDVQKHRLLLQSATLKLSLFLPHPVRHLDGNAKWDSGKQTLSISLPIIRDEW 179          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V9Z3Y0_9STRA2.860e-3841.09PIH1_CS domain-containing protein n=1 Tax=Achlya h... [more]
A0A7S2BY64_9STRA1.600e-3750.78Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A329S0T5_9STRA1.200e-3442.13PIH1_CS domain-containing protein n=3 Tax=Phytopht... [more]
A0A7S2S1L9_9STRA1.380e-3451.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1FGL0_PYTOL3.940e-3341.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A482SSY8_9ARCH9.290e-3350.82PIH1_CS domain-containing protein n=1 Tax=archaeon... [more]
A0A6A3YBP0_9STRA3.310e-3241.71PIH1_CS domain-containing protein n=3 Tax=Phytopht... [more]
W4FJZ8_9STRA3.850e-3238.66PIH1_CS domain-containing protein n=4 Tax=Aphanomy... [more]
A0A833TKV8_PHYIN6.090e-3238.38PIH1 CS-like domain n=1 Tax=Phytophthora infestans... [more]
A0A5D6Y4D8_9STRA7.480e-3237.50PIH1_CS domain-containing protein n=1 Tax=Pythium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1477contigE-siliculosus-1a_F_contig1477:23018..25740 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size600
Model size600
Exons6
Ec32 orthologEc-04_005480.2
Ec32 ortholog descriptionPIH1 domain-containing protein 3
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelPythiales
COG Functional cat.S
EggNOG OGs1MI0I@121069,2CJGJ@1,2RUY1@2759
EggNOG free text desc.flagellated sperm motility
Seed eggNOG ortholog65071.PYU1_T002020
Seed ortholog evalue1.2e-29
Seed ortholog score136.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1477.2785.1prot_E-siliculosus-1a_F_contig1477.2785.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1477 23018..25740 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927986.2979093-CDS-E-siliculosus-1a_F_contig1477:23017..230661622927986.2979093-CDS-E-siliculosus-1a_F_contig1477:23017..23066Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 23018..23066 +
1696318763.9392827-CDS-E-siliculosus-1a_F_contig1477:23017..230661696318763.9392827-CDS-E-siliculosus-1a_F_contig1477:23017..23066Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 23018..23066 +
1622927986.316213-CDS-E-siliculosus-1a_F_contig1477:23551..237031622927986.316213-CDS-E-siliculosus-1a_F_contig1477:23551..23703Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 23552..23703 +
1696318763.9491115-CDS-E-siliculosus-1a_F_contig1477:23551..237031696318763.9491115-CDS-E-siliculosus-1a_F_contig1477:23551..23703Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 23552..23703 +
1622927986.329601-CDS-E-siliculosus-1a_F_contig1477:24091..241921622927986.329601-CDS-E-siliculosus-1a_F_contig1477:24091..24192Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 24092..24192 +
1696318763.958156-CDS-E-siliculosus-1a_F_contig1477:24091..241921696318763.958156-CDS-E-siliculosus-1a_F_contig1477:24091..24192Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 24092..24192 +
1622927986.3479867-CDS-E-siliculosus-1a_F_contig1477:24634..247131622927986.3479867-CDS-E-siliculosus-1a_F_contig1477:24634..24713Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 24635..24713 +
1696318763.966782-CDS-E-siliculosus-1a_F_contig1477:24634..247131696318763.966782-CDS-E-siliculosus-1a_F_contig1477:24634..24713Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 24635..24713 +
1622927986.359057-CDS-E-siliculosus-1a_F_contig1477:25120..252241622927986.359057-CDS-E-siliculosus-1a_F_contig1477:25120..25224Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 25121..25224 +
1696318763.9764285-CDS-E-siliculosus-1a_F_contig1477:25120..252241696318763.9764285-CDS-E-siliculosus-1a_F_contig1477:25120..25224Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 25121..25224 +
1622927986.371761-CDS-E-siliculosus-1a_F_contig1477:25625..257401622927986.371761-CDS-E-siliculosus-1a_F_contig1477:25625..25740Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 25626..25740 +
1696318763.9855006-CDS-E-siliculosus-1a_F_contig1477:25625..257401696318763.9855006-CDS-E-siliculosus-1a_F_contig1477:25625..25740Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1477 25626..25740 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1477.2785.1

>prot_E-siliculosus-1a_F_contig1477.2785.1 ID=prot_E-siliculosus-1a_F_contig1477.2785.1|Name=mRNA_E-siliculosus-1a_F_contig1477.2785.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=200bp
MAGGADLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKP
TQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQP
EYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDV
TRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW*
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mRNA from alignment at E-siliculosus-1a_F_contig1477:23018..25740+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1477.2785.1 ID=mRNA_E-siliculosus-1a_F_contig1477.2785.1|Name=mRNA_E-siliculosus-1a_F_contig1477.2785.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2723bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1477:23018..25740+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCCGGGGGTGCGGACCTTATAGCTCTCAGCGACCTTCTACAAGGAGG TGGGTCTACAGGAGTTTCAACCCCCTAGATAACAACAGATGACCAACGTG TCATTTTGTATCAGACACCAAATGCAAGGACCCGGAAGTGGCTGCAACCC CACAGCAGTACCTCATTCGCGAGCCTTGCGAGCAATTTCCTTATTATCTC ACTTATGTAATGTCGAACATGCTTTCACCGCCAGAGTTTGCCAGAAGTGC CTCCGGCGAAGTCTCAACCACTATCACGACGTATTGCAGGAGGGTTACAG GAAGTAGACTTAGCAGGAAACAGGGGTTTGGTCTCACGGCGGGTTTCCTG GGAGGCCGGGTCTTTCAGCAGGTTACCAGTCATGGTGAAGTACATCCAGG AGCAAAGTGACACGATGGTGGATTGGTGGTTGTTCCAGTCCTTTCGCGCG CGTTCTGTTCTGGGTGTTCCTCTCAAAGTAAGTGCTGCCTAGAGCTATCC CACGCACTTTCGCTCCTGTTGGCAACCACCGAAGCAGGCCAGGATGATCA AGATGAGCGGGCCCACGCCGACCAAGCGCAAGGCAAATTTTTCACACCAG GGGACTTCGGGCCGCCTCGAATCCCAGAGAAACCAACGCAGGCAAGATTC CGTCGAGCTCCGGGTACTCCACGAATGAAGACATGGGTGTGTTGTCGAGG GTGTGGTTAGGGGCACTTTGAGGGTACTCGACCTGCCAAGAAATCGCATA CATCAATAGCACAGTCCCCATCGCCAAGATGTCAACGACAAGTTGCGCCA TAGTGCGTAACTTGTGCCATAACAAGGGCGTTGTTGTGCCATAGCAAGGA CGCGTATATTTCTCTCCTATCTACCTGCTGTATATTTCTCTCCTCCCTAC CGGCGAGAACGGACGTAATAGGTTAGAGACAAGATGGATGATGCAAACGG CTAGCGGGTCACGAACGTTTTAAGCGACATCTCCCGCACTCAAACAAGGG CCTCGTGAGCGGCTCTCGACCTCCCTCACGATCAATCTTGACCCAGCTCC GCCTATATTGTTGCCGTGTTGCAGGCAAGCAAGCCTTCCGACCCGCAGGC AATATGGAGCGAAGAAGAGGCCTTGGAGCAAGACGACGCCTTTTTCGACC CTACCGACAAGCGGCCCCAACCAGAGTGAGACTTCATCTCCTGCGTATGA TTCTCCTAACAGAACAACAGAACGCCACCAAATTAAACGTGTGCAAAAGA AGAAGCTTGTCGTAGACTACAGACCTTCGCAGACGCATGTACACTCGCAA ACACACACATCCACACATCCAGTATCGTGAACACCTTCCCTGCCGTTGTT CATGAGGAAGCACGCTGCCTCCTTCCATGGCACTAAAAACTGGCCCGTGT CCTTCCTTGTGCTACTACCGGGTAGAGGCTATCCACTTTGCTATCCATGC TCGGAGGGTGTACAACCGCCTCCTTAACTGGAACAAAGGGCACACAGATA CCACTTATGGATCCTTGGACAACAAGCTTGGCCAGTCTAACGCAGGGGTA CTTCCCAAAACGTCCCGTTCCCGCCAATAACCCCGCGACCTCGAACGGAA CGTGTCGCTCGCATCAGGTACGACTTTGTGTACAAGCAGAGCGTCATGAC CGAGGACACTTTTCTCGGAATGGCGGGCAAAACCCCGGGGTCCCAGGTGG GTTGAAGTTTAGAATACGGTACCCTTTGAGATTATCTGCTGAGCACAGAT GGGGTGTTCACTGTGCAGCAGGTAACCTTTACCACGCGCCTCCTAGTGAG CACGCAGGCCATTTGCAACGACGAGATACCGGCACAAAAGCTTTGCTCAC CCCGGCTGAAAGCATGCGAGTGTACCACAAGCTGGTCGATCAGTAGACCG ACGATCACAAAAATCATGAACAGGCATAAGGGCATACCCCCCGCCAACGC GGTGCTTCGAACTCTTGCACAGCAGAACGCTCGCCCCTACCGAACGCTCG CCAATCCTTCACAACTGTGGCACAGAACAGCAGGCCCATGTTGGTGGTTC TCTTTGACGTACGCGGCATGCAACACTTGAACGTGGAATCGAAACCTTGT CAGGACTGCACGCACATCGTGGTGAAAGTGGTGTTCCCCGGGTGCCGAAT GCGTGACCTGGAGCTGGACGTCACCAGACGGGCTTTCCTGGCCGCCAGCC CGAAGCTGTGAGTTTGATCGTACCAGCGCGCTCTTGGCCTGGAGCATCGA AATCACGAGCGGAAGGCTCGTAGTAGGTAGGCGCAAAGGCAAGCAATAAA TGACGAGCAGTTCCTCATCCTCAGCGCAAGGCAGTGGTCTCCGCTTAGAA AATGCCGTGGCTCACGATGACGTATTGACGTAGCCCTACTAGACGACGTC AGCGCATTGTCACCATGAAACTCGGTAGAAAATACCATTTTTTCCGCCGC TTACTTCAGTGGTGCCACATCTGCAAAAACAAATACGCCGATCTTGACGA AAAAGAAACGCATTTAGAACGACCAGAGCTACTTACCCGCGCGCGTCCCC GCGGACCTAAGATCAACACCGCTTTCAACGCACTCACTTGCGGTTGCCCT TTCCGCAGGCGACTGGCGACCTACCTGCCTTTCCCTGTCGACGAGACCAA GGGGGTGGCCAAGTGGGATGCGGGGAACGAGACGCTGTCAGTCACCCTGC CCATCGTCGAGGCTGAGTGGTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1477:23018..25740+

>mRNA_E-siliculosus-1a_F_contig1477.2785.1 ID=mRNA_E-siliculosus-1a_F_contig1477.2785.1|Name=mRNA_E-siliculosus-1a_F_contig1477.2785.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1200bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1477:23018..25740+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCCGGGGGTGCGGACCTTATAGCTCTCAGCGACCTTCTACAAGGAGA
TGGCCGGGGGTGCGGACCTTATAGCTCTCAGCGACCTTCTACAAGGAGCA
GGCCAGGATGATCAAGATGAGCGGGCCCACGCCGACCAAGCGCAAGGCAA
ATTTTTCACACCAGGGGACTTCGGGCCGCCTCGAATCCCAGAGAAACCAA
CGCAGGCAAGATTCCGTCGAGCTCCGGGTACTCCACGAATGAAGACATGG
CAGGCCAGGATGATCAAGATGAGCGGGCCCACGCCGACCAAGCGCAAGGC
AAATTTTTCACACCAGGGGACTTCGGGCCGCCTCGAATCCCAGAGAAACC
AACGCAGGCAAGATTCCGTCGAGCTCCGGGTACTCCACGAATGAAGACAT
GGGCAAGCAAGCCTTCCGACCCGCAGGCAATATGGAGCGAAGAAGAGGCC
TTGGAGCAAGACGACGCCTTTTTCGACCCTACCGACAAGCGGCCCCAACC
AGAGCAAGCAAGCCTTCCGACCCGCAGGCAATATGGAGCGAAGAAGAGGC
CTTGGAGCAAGACGACGCCTTTTTCGACCCTACCGACAAGCGGCCCCAAC
CAGAGTACGACTTTGTGTACAAGCAGAGCGTCATGACCGAGGACACTTTT
CTCGGAATGGCGGGCAAAACCCCGGGGTCCCAGGTACGACTTTGTGTACA
AGCAGAGCGTCATGACCGAGGACACTTTTCTCGGAATGGCGGGCAAAACC
CCGGGGTCCCAGGACTGCACGCACATCGTGGTGAAAGTGGTGTTCCCCGG
GTGCCGAATGCGTGACCTGGAGCTGGACGTCACCAGACGGGCTTTCCTGG
CCGCCAGCCCGAAGCTGACTGCACGCACATCGTGGTGAAAGTGGTGTTCC
CCGGGTGCCGAATGCGTGACCTGGAGCTGGACGTCACCAGACGGGCTTTC
CTGGCCGCCAGCCCGAAGCTGCGACTGGCGACCTACCTGCCTTTCCCTGT
CGACGAGACCAAGGGGGTGGCCAAGTGGGATGCGGGGAACGAGACGCTGT
CAGTCACCCTGCCCATCGTCGAGGCTGAGTGGTAGGCGACTGGCGACCTA
CCTGCCTTTCCCTGTCGACGAGACCAAGGGGGTGGCCAAGTGGGATGCGG
GGAACGAGACGCTGTCAGTCACCCTGCCCATCGTCGAGGCTGAGTGGTAG
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