mRNA_E-siliculosus-1a_F_contig1477.2785.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A1V9Z3Y0_9STRA (PIH1_CS domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3Y0_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.860e-38 Identity = 83/202 (41.09%), Postives = 121/202 (59.90%), Query Frame = 1
Query: 1 MAGGADLIALSDLLQGAGQDDQDERAHADQAQGK--FFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIV-EAEW 597
M+ +DL+ALSDLL + E H D+ Q K F TPG P +P+ + G P +K DP+AIW E+E + D + +D R +P+++ +YKQ VMTED FLG+ K P + C +VVK+VFPG ++R+++LDV + +A S +L+L+TYLP+PV +G AKWD +TL VTLPIV + +W
Sbjct: 1 MSAFSDLLALSDLL-------RSEETHDDEHQRKQAFVTPGSIASPALPKGGIIDQ-----GFPLIK------KDPKAIWDEDE-VGSDAEDEEDSDDRKRPKHEILYKQDVMTEDVFLGLGDKDPSTAHCDAMVVKIVFPGHKLREIDLDVKAQKLVAQSSRLKLSTYLPYPVKHKEGKAKWDPKTDTLIVTLPIVRDDDW 183
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A7S2BY64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BY64_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.600e-37 Identity = 65/128 (50.78%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 217 DPQAIWSEEEALEQDDAFF-DPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
DP+ IW E+E ++ D D RP+P+Y+ ++KQ VM+ED FLGM KTPGS DCTH+ +++ FPG M+DL+LDVT + A SP++ LA YLP PVD +G AKWD E L +TLPI EW
Sbjct: 118 DPKDIWDEDEVPTEEAILVEDMEDARPRPKYEILFKQDVMSEDVFLGMGEKTPGSSDCTHMTIRIQFPGHTMKDLDLDVTTQKLRAESPRMLLAIYLPLPVDSDRGSAKWDTKKEMLIITLPIKRDEW 245
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A329S0T5_9STRA (PIH1_CS domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329S0T5_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.200e-34 Identity = 83/197 (42.13%), Postives = 117/197 (59.39%), Query Frame = 1
Query: 10 GADLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDF-GPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
G +L+AL+DLL G QD QD+ + +Q Q + TP G ++PE R G R + DP+AIWS +E + DD D + R +P+++ +YKQSVMTED FLG++ K P S C +VV+V P R+ DLELDV R+ L S KL+L LP+PV +G AKWD +++LS++LPI+ EW
Sbjct: 5 GNELLALNDLLTGI-QDAQDD--YEEQNQAQQVTPYTLNGAAKLPE------VTRPIGQIRQE-------DPKAIWSIDE-VPSDDEDDDSFETRARPKFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVECPDHRLEDLELDVKRQKLLLLSSKLKLVLSLPYPVRHLEGQAKWDHKSQSLSISLPIIRDEW 184
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A7S2S1L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1L9_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.380e-34 Identity = 66/128 (51.56%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 217 DPQAIWSEEEALEQDDAFFDPT-DKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
DP+ IW E+E ++ + D R +P Y+ ++KQ+V T+D FLG KTPGS DCTHIV+K VFP MRDL LDVT+ A S + L+ YLP PVD G AKWDA E+L VTLPIV EW
Sbjct: 87 DPKDIWDEDEVPPEEAILSEEIHDGRQRPRYEVLFKQAVGTQDVFLGTGDKTPGSVDCTHIVIKAVFPSHSMRDLHLDVTKNKIRAESKSMLLSMYLPLPVDPDHGSAKWDAKKESLIVTLPIVRDEW 214
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A8K1FGL0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGL0_PYTOL) HSP 1 Score: 126 bits (316), Expect = 3.940e-33 Identity = 82/200 (41.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query: 1 MAGG-ADLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
M GG A+++ALSDLL D D + H D Q TP AP R KP D +AIW EE + DD D D R +P ++ +YKQSVMTED FLG++ K P S C +VV+V P R+ D+ELDV ++ L S L+L+ YLP+PV G A+WDA +TLS+ LPI+ EW
Sbjct: 1 MEGGMAEILALSDLLANC-NDSDDYQEHDDVRQTPMITPASM------------TGHSAPVVDRP-IGQIKPVDSKAIWLPEE-VPSDDEDDDTFDTRRRPTFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVDCPKHRLEDIELDVKKQKLLLHSSTLKLSLYLPYPVRYQDGQAQWDAVKQTLSIRLPIIRDEW 185
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A482SSY8_9ARCH (PIH1_CS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSY8_9ARCH) HSP 1 Score: 125 bits (314), Expect = 9.290e-33 Identity = 62/122 (50.82%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 229 IWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAE 594
IW+E+E + +DA + D RP P ++ YKQS+ TEDTFLG++ KTP + DCTHIV+K+ FPG MR+L+LDV+ +AAS RL TYLP VD+ G A +D+ E L+VTLPI+ E
Sbjct: 68 IWAEDE-IPTEDALLNVRDDRPTPRFEISYKQSIGTEDTFLGLSDKTPLTTDCTHIVIKIHFPGSSMRELDLDVSSNRIMAASRTHRLFTYLPADVDDANGKAAFDSKKEVLTVTLPIIARE 188
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A6A3YBP0_9STRA (PIH1_CS domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YBP0_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.310e-32 Identity = 83/199 (41.71%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 10 GADLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEAL---EQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
G +L+AL+DLL G QD QDE +Q Q TP + P R DP+AIWS +E E DDAF + R +P+++ +YKQSVMTED FLG++ K P S C +VV+V P R+ D+ELDV R+ L S L+L YLP PV +G AKWD +LSV+LPIV EW
Sbjct: 5 GNELLALNDLLTGC-QDAQDEYEE-NQNQLHQITPYTLNGAATAKYPEVTR----------PIGQILQDDPKAIWSMDEVPSDDEDDDAF----ETRSRPQFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVECPDHRLEDIELDVKRQKLLLLSSTLKLVLYLPHPVRHLEGQAKWDHKTHSLSVSLPIVRDEW 187
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: W4FJZ8_9STRA (PIH1_CS domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJZ8_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.850e-32 Identity = 75/194 (38.66%), Postives = 107/194 (55.15%), Query Frame = 1
Query: 16 DLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
DL+ALSDLLQ A +D++ E G IP P +A RR P D +AIW+++E DD D D R +P+Y+ ++KQ VMTED FLG+ K P S +C HI +K+VFPG + ++ LD+ +R +A S +L Y P PV +G A WDA +TL+VT+P+++ EW
Sbjct: 6 DLMALSDLLQPAEEDERHE--------GTLTKTPPMPHANIP-LPKEALNRRI--------GQIVPQDLKAIWTDDEVAGSDDD--DEFDTRTRPKYEVLFKQEVMTEDVFLGLGDKDPSSSNCDHITIKMVFPGHCLDEIGLDLNKRRLVAQSHACKLVLYWPTPVQHKRGRATWDAKTDTLAVTVPMLKDEW 180
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A833TKV8_PHYIN (PIH1 CS-like domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TKV8_PHYIN) HSP 1 Score: 123 bits (308), Expect = 6.090e-32 Identity = 76/198 (38.38%), Postives = 109/198 (55.05%), Query Frame = 1
Query: 10 GADLIALSDLLQGA--GQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
G +L+AL+DLL G +DD +E+ A Q + G P + Q R DP+AIWS E + DD D + R +P+++ +YKQSVMTED FLG++ K P S C +VV+V P R+ D+ELDV R+ L S L+L +LP+PV +G AKWD +++L+V+LPI+ EW
Sbjct: 5 GNELLALNDLLTGIQEAEDDYEEQNRAQQVT-PYTLSGSSKPLEVTRPIGQIRQE----------------DPKAIWSIHE-VPSDDEDDDTFETRARPKFEILYKQSVMTEDVFLGLSDKDPSSAHCEAMVVRVECPNHRLEDIELDVKRQKLLLLSSTLKLVLHLPYPVRHLEGQAKWDHKSQSLAVSLPIIRDEW 184
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Match: A0A5D6Y4D8_9STRA (PIH1_CS domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4D8_9STRA) HSP 1 Score: 122 bits (307), Expect = 7.480e-32 Identity = 75/200 (37.50%), Postives = 108/200 (54.00%), Query Frame = 1
Query: 1 MAGGA-DLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPTQARFRRAPGTPRMKTWASKPSDPQAIWSEEEALEQDDAFFDPTDKRPQPEYDFVYKQSVMTEDTFLGMAGKTPGSQDCTHIVVKVVFPGCRMRDLELDVTRRAFLAASPKLRLATYLPFPVDETKGVAKWDAGNETLSVTLPIVEAEW 597
M GGA D++ALS+L+ G Q ++E A Q + TP G +AP R K +DP+AIW+ + P+D +++ +YKQSVMTED FLG++ K P +C +VV+V P R+ D+ELDV + L S L+L+ +LP PV G AKWD+G +TLS++LPI+ EW
Sbjct: 1 MEGGAGDILALSELITGCQQAFEEEICDAQQRRAPALTPSTIG-----------GAAKAPIVDRP-IGQIKAADPKAIWNLADV---------PSDDEDDTKFEILYKQSVMTEDVFLGLSDKDPSFANCDAMVVRVECPRHRLEDIELDVQKHRLLLQSATLKLSLFLPHPVRHLDGNAKWDSGKQTLSISLPIIRDEW 179 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1477.2785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1477.2785.1 >prot_E-siliculosus-1a_F_contig1477.2785.1 ID=prot_E-siliculosus-1a_F_contig1477.2785.1|Name=mRNA_E-siliculosus-1a_F_contig1477.2785.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=200bp MAGGADLIALSDLLQGAGQDDQDERAHADQAQGKFFTPGDFGPPRIPEKPback to top mRNA from alignment at E-siliculosus-1a_F_contig1477:23018..25740+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1477.2785.1 ID=mRNA_E-siliculosus-1a_F_contig1477.2785.1|Name=mRNA_E-siliculosus-1a_F_contig1477.2785.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2723bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1477:23018..25740+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1477:23018..25740+ >mRNA_E-siliculosus-1a_F_contig1477.2785.1 ID=mRNA_E-siliculosus-1a_F_contig1477.2785.1|Name=mRNA_E-siliculosus-1a_F_contig1477.2785.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1200bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1477:23018..25740+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |