prot_E-siliculosus-1a_F_contig1435.2556.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1435.2556.1
Unique Nameprot_E-siliculosus-1a_F_contig1435.2556.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length158
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1435.2556.1 vs. uniprot
Match: D7G116_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G116_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 3.480e-48
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 
Query:   80 MDGAYKIGELVNFNGGRVQPQSLEPKHALIFRVEIGGHMVAYVSGETKPARRTRMVKTDLIARNGVFVHVVDKILYAE 157
            MDGAYKIGELVNFNGGRVQPQSLEPKHALIFRVEIGGHMVAYVSGETKPARRTRMVKTDLIARNGVFVHVVDKILYAE
Sbjct:    1 MDGAYKIGELVNFNGGRVQPQSLEPKHALIFRVEIGGHMVAYVSGETKPARRTRMVKTDLIARNGVFVHVVDKILYAE 78
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BLAST of mRNA_E-siliculosus-1a_F_contig1435.2556.1 vs. uniprot
Match: A0A8J2X3H5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3H5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 8.850e-14
Identity = 44/132 (33.33%), Postives = 74/132 (56.06%), Query Frame = 0 
Query:   28 EVLENAGCRLFLDAMRK-AGRLEGANSITIIAPNDGAF-PSADAFDDSSWGLHIMDGAYKIGELVNFNGGRVQPQSLEPKHALIFRVEIGGHMVAYVSGETKPARRTRMVKTDLIARNGVFVHVVDKILYAE 157
            + LEN  C  F   +R+ A  L G    T++ P D AF    DAF+D  WG+H++DG +K+G++     GRV  + ++ +H +  RV+  G    ++  +  P RR  +++ D+  ++G  +HVVD ILY +
Sbjct:  352 DALEN--CGKFAQLVREQAPDLRGC---TVLVPTDDAFLGDDDAFEDDCWGVHVIDGPWKMGDMAV--AGRVLGRHVDTRHGIRTRVQPDGRYAVWLDTDPSPPRRALVLEMDISCQHGTVLHVVDGILYPD 476
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1435.2556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G116_ECTSI3.480e-48100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2X3H5_9STRA8.850e-1433.33Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10coord: 31..156
e-value: 1.3E-7
score: 33.9
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 23..155
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 41..155
e-value: 6.8E-5
score: 23.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1435contigE-siliculosus-1a_F_contig1435:15689..17460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1435.2556.1mRNA_E-siliculosus-1a_F_contig1435.2556.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1435 15597..17776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1435.2556.1 ID=prot_E-siliculosus-1a_F_contig1435.2556.1|Name=mRNA_E-siliculosus-1a_F_contig1435.2556.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=158bp
MPSPKHRLTDGSPEYEYGMRTSLPPLAEVLENAGCRLFLDAMRKAGRLEG
ANSITIIAPNDGAFPSADAFDDSSWGLHIMDGAYKIGELVNFNGGRVQPQ
SLEPKHALIFRVEIGGHMVAYVSGETKPARRTRMVKTDLIARNGVFVHVV
DKILYAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
IPR036378FAS1_dom_sf