mRNA_E-siliculosus-1a_F_contig1426.2514.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: D7FH29_ECTSI (Flavoprotein Monooxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH29_ECTSI) HSP 1 Score: 322 bits (825), Expect = 1.090e-101 Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 1
Query: 13 GEYYDLPSDKLNYYAGPLTGGSKVLVSGDITPGQCFTLGYACAAVAGGILALLLPRRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEAPAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILGDEACSR 513
GEYYDLPSDKLNYYAGPLTGGSKVLVSGDITPGQCF LGYACAA AGGILAL+LPRRCLATGLALMFIAHQYS+PPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEA APGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILGDEACSR
Sbjct: 66 GEYYDLPSDKLNYYAGPLTGGSKVLVSGDITPGQCFALGYACAAAAGGILALVLPRRCLATGLALMFIAHQYSAPPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEALAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILGDEACSR 232
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: A0A2P6NCS8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NCS8_9EUKA) HSP 1 Score: 149 bits (375), Expect = 2.010e-38 Identity = 76/167 (45.51%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 13 GEYYDLPSDKLNYYAGPLTGGSKVLVSGDITPGQCFTLGYACAAVAGGILALLLPRRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALV-QSASFEEAPAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILGDEACS 510
GEYYD SD LN +A P TGGSKVL SG I+ QC +GY A IL +++P+R GL ++F++ QYS+PP NH LGELTA++ NVLLP FA + +S + + + + +L++P +K++LF+ LNMAD+RPDWL K TLPV+ G++ C+
Sbjct: 72 GEYYDFKSDSLNRHASPFTGGSKVLQSGAISREQCRNMGYMSMIGALLILCIVMPQRVFLLGLTMIFLSSQYSAPPLVLNHAALGELTAAILMNVLLPLFAFYISKSVGLQITQSSPALNGPMLMLILPPALIKIALFIVLNMADKRPDWLANKITLPVLFGNDTCA 238
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: A0A0G4IS83_PLABS (FAD_binding_3 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IS83_PLABS) HSP 1 Score: 142 bits (358), Expect = 3.790e-36 Identity = 78/172 (45.35%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 7 HTGEYYDLPSDKLNYYAGPLTGGSKVLV----SGDITPGQCFTLGYACAAVAGGILALLLPRRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEAPAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILGDEACS 510
+TGE+YDL SD+LN + LTGGS+VL S + P + A + ++A +LP R +A++ +AHQYSSPP NHR LGE+TA+L NVLLP FAA Q++ LF L+VP+FF+K +LF+ LN+ DRRPDWL K T+PV++GD A S
Sbjct: 69 YTGEFYDLSSDRLNRHGTRLTGGSRVLSDPSPSSKVDPIVSLYIAAGFAIYSAALVACVLPPRVAPLAIAMLALAHQYSSPPLMLNHRALGEVTAALVQNVLLPVFAAWTQTSDLSSIAGRLLF------LIVPSFFIKFALFVVLNLNDRRPDWLAGKVTIPVLVGDRASS 234
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: A0A1Y2I450_9FUNG (Uncharacterized protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2I450_9FUNG) HSP 1 Score: 124 bits (311), Expect = 9.100e-30 Identity = 84/192 (43.75%), Postives = 109/192 (56.77%), Query Frame = 1
Query: 13 GEYYDLPSDKLNYYAGP--LTGGSKVLVSG------DITP------GQCFTLGYACAAVAG-------GILALLLPRRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALVQSAS----FEEAPAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILGDEACSR 513
GEYYDLPSD+ Y A P TGGS+VLVS +TP GQ TL A+AG G A+L P LA++ +AHQYS+PP K NHR LGEL A + N+LLP F A++ + + A H SLA+LV+P+F LK++LF+ LN ADRR D+LG K TL ++L A +
Sbjct: 80 GEYYDLPSDRYAYLASPSPFTGGSRVLVSAAADAAHKVTPLTCKHLGQLTTLLALVQALAGLGWLDLAGREAVLFP-----LALAMIALAHQYSAPPLKLNHRALGELGAGVVMNLLLPYFGAILHLPNKVYLTNPSAAMANLHTSLAMLVIPSFLLKIALFMILNWADRRADFLGGKTTLALVLSPHALAH 266
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: A0A7S3ENE3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENE3_9RHOD) HSP 1 Score: 119 bits (297), Expect = 6.790e-28 Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 13 GEYYDLPSDKLNYYAGPLTGGSKVLVSGDITPGQCFTLGYACAAVAGGILALLLPRRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEAPAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILGDEACS 510
GEY+D SD++N Y+G LTGGS LV G + G ++ I+ +LP L ++ +A+QYSSPP NHR LGE+TA++ N LLP FA ++Q + EE L+ + +L+VP LK+ LFL LNM DRR DW G K T+PV+L DEA S
Sbjct: 61 GEYFDRDSDRMNRYSGGLTGGSGALVDG-VHEKVALYGGIFLTLLSATIIYTILPPEVRPLALVMLILANQYSSPPLLFNHRALGEITATIVVNCLLPTFAYMIQISGQEEFEWWTLWR-NYKLLIVPPALLKVCLFLVLNMNDRRADWQGHKTTIPVLL-DEAIS 223
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: A0A836CF39_9STRA (FAD_binding_3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF39_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 6.830e-21 Identity = 66/175 (37.71%), Postives = 86/175 (49.14%), Query Frame = 1
Query: 64 LTGGSKVLVSGDITPGQCFTLGYACAAVAGGILALLLPRRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEAPAPGLFHAS-----LAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTL--------------------PVILGDEACSR 513
LTGG+ +L+S D ++CA L+ G A++ +AHQYS+PP + NH LGEL A+ NVLLP FAAL+Q ++ + P A+ LA LVVP K SLFL LNM DRRPDWL K PV+LG+ A +R
Sbjct: 171 LTGGAPLLLSRDAAAAAGANTAWSCAV--------------LSLGAAMLALAHQYSAPPLRLNHNALGELGAATVMNVLLPWFAALLQDSASDSDSRPRYASATYAMTRLAPLVVPGALFKFSLFLVLNMEDRRPDWLAGKXXXXXXXXXXXXXXXXXXXXXXXPVVLGETASAR 331
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: A0A1H7KK73_STRJI (1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Streptacidiphilus jiangxiensis TaxID=235985 RepID=A0A1H7KK73_STRJI) HSP 1 Score: 76.3 bits (186), Expect = 3.640e-13 Identity = 55/166 (33.13%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 1 TPHTGEYYDLPSDKLNYYAGPLTGGSKVLVSGDITPGQCFTLGYACAAVAGGILALLLPRRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEAPAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILGD 498
T + EY+DL +D+ N TGGS++LVSG + P + + A VA G++AL+ T A+ +A Y++PP + N+R LGEL ++ L P A L+Q+ G A LV FL++S+ +N++D D K TL V LG+
Sbjct: 87 THYCNEYFDLEADRANAAPTSWTGGSRILVSGQLQPEVSLSAAFVLAFVALGLIALMPGTEARLTAAAIATLAWFYTAPPLRLNYRALGELACAVVLYGLGPLLACLLQADRLTADDVVG------AGLVCTLQFLRMSV---MNLSDIDGDRATGKRTLAVALGE 243
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: UPI00131CB9B3 (prenyltransferase n=1 Tax=Amycolatopsis anabasis TaxID=1840409 RepID=UPI00131CB9B3) HSP 1 Score: 75.5 bits (184), Expect = 5.570e-13 Identity = 61/174 (35.06%), Postives = 86/174 (49.43%), Query Frame = 1
Query: 1 TPHTGEYYDLPSDKLNYYAGPLTGGSKVLVSGDITP----GQCFTLGYACAAVAGGILALL--LP---RRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEAPAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILG 495
T + EY+DL +D + TGGS+VLVSG++ P FTL + G+LAL+ LP R L GLA++ +A Y++PP + N+ LGE+T S +L P A Q + P LF S P F + + + +N DR D L K+TLP LG
Sbjct: 57 TQYCNEYFDLEADSAHTGPNSWTGGSRVLVSGELKPVVSLAASFTLLF-------GVLALVVFLPSPVERLL--GLAMVTLAWFYTAPPIRLNYHALGEITTSGVLTILCPLLAVYAQMKTVP----PVLFALS-----GPLFLVMAARMMVMNFCDRDSDLLAGKHTLPNTLG 212
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: A0A832BUZ1_9DELT (Prenyltransferase (Fragment) n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A832BUZ1_9DELT) HSP 1 Score: 74.7 bits (182), Expect = 6.360e-13 Identity = 58/171 (33.92%), Postives = 78/171 (45.61%), Query Frame = 1
Query: 1 TPHTGEYYDLPSDKLNYYAGPLTGGSKVLVSGDITPGQCFTLGYACAAVAGGILALLLPRRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEAPAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILGDEACSR 513
T + EYYDLP+D+LN P TGGS+VLV+GD+ P A+A + L C A ++ ++ YS PP + RG GE T N+ +P + P L +L LV P F ++ L +NMAD D K TL V LG SR
Sbjct: 71 THYCNEYYDLPADRLNRNPSPWTGGSRVLVNGDLDPKVSIQTSSVAFALAVALAFCLPSGYCQALAALIILLSWGYSVPPIRLAWRGFGEATVIAVLNLGVPLLGCALLLGEL-----PLLLWLTLLPLV-PISFTRM---LIMNMADAESDRAAGKRTLVVKLGMAMSSR 232
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Match: A0A542DI54_9PSEU (1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Amycolatopsis cihanbeyliensis TaxID=1128664 RepID=A0A542DI54_9PSEU) HSP 1 Score: 72.4 bits (176), Expect = 7.080e-12 Identity = 60/172 (34.88%), Postives = 85/172 (49.42%), Query Frame = 1
Query: 1 TPHTGEYYDLPSDKLNYYAGPLTGGSKVLVSGDITP----GQCFTLGYACAAVAGGILALLLP---RRCLATGLALMFIAHQYSSPPFKCNHRGLGELTASLASNVLLPQFAALVQSASFEEAPAPGLFHASLAVLVVPAFFLKLSLFLALNMADRRPDWLGAKYTLPVILG 495
T + EY+DL +D+ + TGGS+VLVSG++ P FTL + +L +LLP R + GLA + +A Y++PP + N+R LGE+T S A VL P LV A + P L L P F + ++ + +N DR D K TLP LG
Sbjct: 57 TQYCNEYFDLRADRAHTGPNRWTGGSRVLVSGELKPVVGLSAAFTLLFGVL-----VLVVLLPAPVERLI--GLAGITLAWFYTAPPVRLNYRALGEITTSGALTVLSPL---LVVYAQMKTVPPV------LLALFGPMFLVMVARMIVMNFCDRESDLRAGKRTLPNTLG 212 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1426.2514.1 >prot_E-siliculosus-1a_F_contig1426.2514.1 ID=prot_E-siliculosus-1a_F_contig1426.2514.1|Name=mRNA_E-siliculosus-1a_F_contig1426.2514.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=172bp TPHTGEYYDLPSDKLNYYAGPLTGGSKVLVSGDITPGQCFTLGYACAAVAback to top mRNA from alignment at E-siliculosus-1a_F_contig1426:32358..32873+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1426.2514.1 ID=mRNA_E-siliculosus-1a_F_contig1426.2514.1|Name=mRNA_E-siliculosus-1a_F_contig1426.2514.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=516bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1426:32358..32873+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1426:32358..32873+ >mRNA_E-siliculosus-1a_F_contig1426.2514.1 ID=mRNA_E-siliculosus-1a_F_contig1426.2514.1|Name=mRNA_E-siliculosus-1a_F_contig1426.2514.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1032bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1426:32358..32873+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |