mRNA_E-siliculosus-1a_F_contig1418.2469.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1418.2469.1
Unique NamemRNA_E-siliculosus-1a_F_contig1418.2469.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: D7FUW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW4_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 9.580e-158
Identity = 239/247 (96.76%), Postives = 243/247 (98.38%), Query Frame = 1 
Query:   61 MKWTSILPCVVGLCPASAFVAPSLIVKQGTSRVRASGACVGRQHDPSSSLRNSAPTIIMSRG-EEGEKWGAASETTRFARGVKAALTSAAIGLTLAGPMLSLPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSFFKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            MKWT+ILPCVVGLCPASAFVAP+LIVKQGTSRVRASGACVGRQHDPSSSLRNSAPT+ MSRG EEGE+ GAAS TTRFARGVKAALTSAAIGLTLAGPMLSLPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSFFKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE
Sbjct:    1 MKWTNILPCVVGLCPASAFVAPTLIVKQGTSRVRASGACVGRQHDPSSSLRNSAPTMSMSRGGEEGEQSGAASGTTRFARGVKAALTSAAIGLTLAGPMLSLPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSFFKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 247
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: A0A7S3H326_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H326_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.360e-48
Identity = 79/139 (56.83%), Postives = 105/139 (75.54%), Query Frame = 1 
Query:  385 DKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            DKR VGEI ASG++FKD +NVE F DPKV+GV +YLSDF+R VAD++  GD FSDP +A L CVRSGP++V   +   KEGE++F E RS  FK++ V+R+YD E  N+VYV ++ + DT  D NKSRFKS +CA+H++
Sbjct:    2 DKRLVGEIPASGMIFKDTINVEEFDDPKVQGVNIYLSDFSRSVADRISKGDFFSDPGAAGLACVRSGPVKVAADLQPRKEGEDVFTESRSILFKTLKVKRVYDAEGKNVVYVVFTDRFDTNDDKNKSRFKSQICAIHVD 140
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: A0A6V1LIM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LIM7_HETAK)

HSP 1 Score: 173 bits (439), Expect = 1.510e-48
Identity = 87/137 (63.50%), Postives = 105/137 (76.64%), Query Frame = 1 
Query:  391 RTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            RTV EI ASGLVFKD LNVEAF+DPKV+GVTLYLSDF RP+ ++L   D FSDPSSA++ C R+GPM + D I    +GE++F E +S  FKSI V+R+YD + N +VYVSYS KL    D NKSRFKSSLCALH+E
Sbjct:   68 RTVAEIPASGLVFKDTLNVEAFADPKVEGVTLYLSDFTRPITERLQK-DFFSDPSSASVTCARTGPMRLADNIERGPKGEDVFSEAKSLLFKSIKVKRVYDADTNTVVYVSYSDKLIKSDDDNKSRFKSSLCALHVE 203
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: A0A7S2LDB5_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LDB5_9DINO)

HSP 1 Score: 171 bits (434), Expect = 4.770e-48
Identity = 88/169 (52.07%), Postives = 120/169 (71.01%), Query Frame = 1 
Query:  298 GVKAALTSAAI-GLTLAGPMLSLPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            GV+AA  +A +    +AG +   P  ASAGDKR VGEI A+GL+FKD +NVE F DPKVKGV LY+SDF++ + D+L  GD FSDP S+ L CV++GP+ V   +   KEGE++F E RS  FK++ V+R+YD EA N+VYV ++ +LD   D NK+RF+S +CALH +
Sbjct:   12 GVRAAFAAACLLAAAVAGTVA--PEAASAGDKRVVGEIPANGLIFKDTINVEEFDDPKVKGVNLYISDFSKALTDRLSKGDFFSDPGSSGLSCVKTGPILVSPDLQAKKEGEDVFTEARSIMFKTLRVKRVYDAEAQNVVYVVFTDRLDNSDDKNKTRFQSQVCALHAD 178
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: A0A7S2RD44_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD44_9STRA)

HSP 1 Score: 172 bits (435), Expect = 5.390e-48
Identity = 93/164 (56.71%), Postives = 116/164 (70.73%), Query Frame = 1 
Query:  319 SAAIGLTLAGPMLSL---PGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            SA +G  LA   L L   P  A AG+K  +GE+  SG VFKD L+V +F+DPKV GVT+Y+SDF++ + D+L  GD FSDPS+A++ CVR GP+ +   I  SK GEE+F E RS  FKS+ VRRLYD E NN+VYVSYS K+    D NKSRFKSSLCALH+E
Sbjct:   27 SAVMGTALAAQSLMLLLHPSPAFAGEK--IGEVPTSGFVFKDTLDVSSFADPKVSGVTIYVSDFSKAITDRLQ-GDFFSDPSTASITCVRDGPVRLTGSIDKSKAGEEIFSEARSLLFKSVKVRRLYDAEKNNVVYVSYSQKVVNNDDSNKSRFKSSLCALHLE 187
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: A0A7S4I5U4_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I5U4_9EUKA)

HSP 1 Score: 170 bits (431), Expect = 1.500e-47
Identity = 94/172 (54.65%), Postives = 119/172 (69.19%), Query Frame = 1 
Query:  289 FARGVKAALTSAAIGLTLA-GPMLSLPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            F+  V+ ++ +AA+  +LA  P+++LP  A A DKRTVGEIS SGL+FKD L +EAF DPKV G+ LYLSDF RPV +KL  GD+FSDPSS  L C RSG + V    S  K GEE+F E RS  FKS+ VRR+ DK   ++VY  YS +LD   D N SRFKSSLCA+ ++
Sbjct:   10 FSSSVQNSVLAAALTASLATSPLVALPDAAFA-DKRTVGEISTSGLIFKDTLKIEAFDDPKVSGINLYLSDFERPVTEKLAKGDVFSDPSSGGLSCSRSGKVVVSATASFDKGGEEVFSEARSLVFKSLKVRRVIDKPGKSVVYAVYSQRLDKKEDSNNSRFKSSLCAVPVD 180
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: A0A812HSU0_9DINO (CreA protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812HSU0_9DINO)

HSP 1 Score: 171 bits (432), Expect = 8.580e-47
Identity = 82/164 (50.00%), Postives = 118/164 (71.95%), Query Frame = 1 
Query:  310 ALTSAAIGLTLAGPMLSLPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            A +++A GL L      +   A A  KR VGEI ASG +FKD +NVEAF DPKV GV+LY+SDF+R +AD++  GD FSDP +A L C ++GP+++   +  SKEGE++F E R+  FK++ V+R+YD +A NI+YV+Y+ ++D  +D NKSRFKS +CA+HI+
Sbjct:   90 AYSASAAGLALLLGFFVMQAPARAESKRLVGEIPASGFIFKDTINVEAFEDPKVSGVSLYISDFSRSMADRVSKGDFFSDPGAAGLTCAKNGPVKISPDLKPSKEGEDVFSESRAILFKTLKVKRIYDADAKNILYVAYTERVDNNNDANKSRFKSQVCAVHID 253
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: A0A1Q9F2P2_SYMMI (Uncharacterized protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9F2P2_SYMMI)

HSP 1 Score: 167 bits (424), Expect = 7.060e-46
Identity = 81/160 (50.62%), Postives = 116/160 (72.50%), Query Frame = 1 
Query:  322 AAIGLTLAGPMLSLPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            AA GL +   + ++   ASA  KR VGEI ASG +FKD +NVEAF DPKV GV+LY+SDF+R +AD++  GD FSDP +A L C R+GP+ +   +  SKEGE++F E R+  FK++ V+R+YD +A NI+YV+++ ++D  +D NKSRFKS + A+HI+
Sbjct:   73 AATGLAILLGLFAVLSPASAESKRVVGEIPASGFIFKDTINVEAFEDPKVSGVSLYISDFSRSMADRVSKGDFFSDPGAAGLTCARNGPVMISPDLKPSKEGEDVFTESRAILFKTLKVKRIYDADAKNILYVAFTERMDNNNDSNKSRFKSQVVAVHID 232
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: A0A7S3PVU6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVU6_9STRA)

HSP 1 Score: 165 bits (417), Expect = 2.690e-45
Identity = 82/147 (55.78%), Postives = 111/147 (75.51%), Query Frame = 1 
Query:  361 LPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            LPG  +  + R VGEI+ SG+VFKD L VE+F DPKVKGVTLY+S+F RP+ ++L   D F+DPS A++ C ++GP+ V D I   K+GEE+F+E+RS  FK + V+R+YDKE N +VYVS++++LD  SD NKSRFKSS CAL +E
Sbjct:   58 LPGGEANAESRLVGEIAGSGIVFKDTLTVESFDDPKVKGVTLYISNFQRPLNERLKK-DFFNDPSFASVACAKTGPIVVADNIVIGKQGEEVFEENRSLLFKQLKVQRIYDKEKNTVVYVSFNTRLDKNSDDNKSRFKSSTCALGLE 203
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BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Match: A0A812IZF1_9DINO (CreA protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812IZF1_9DINO)

HSP 1 Score: 167 bits (424), Expect = 5.040e-45
Identity = 81/160 (50.62%), Postives = 116/160 (72.50%), Query Frame = 1 
Query:  322 AAIGLTLAGPMLSLPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 798
            AA GL +   + ++   ASA  KR VGEI ASG +FKD +NVEAF DPKV GV+LY+SDF+R +AD++  GD FSDP +A L C R+GP+ +   +  SKEGE++F E R+  FK++ V+R+YD +A NI+YV+++ ++D  +D NKSRFKS + A+HI+
Sbjct:  144 AATGLAILLGLFTVLAPASAESKRVVGEIPASGFIFKDTINVEAFEDPKVSGVSLYISDFSRSMADRVSKGDFFSDPGAAGLTCARNGPVMISPDLKPSKEGEDVFTESRAILFKTLKVKRIYDADAKNILYVAFTERMDNNNDSNKSRFKSQVVAVHID 303
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUW4_ECTSI9.580e-15896.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3H326_9STRA1.360e-4856.83Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6V1LIM7_HETAK1.510e-4863.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2LDB5_9DINO4.770e-4852.07Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A7S2RD44_9STRA5.390e-4856.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4I5U4_9EUKA1.500e-4754.65Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A812HSU0_9DINO8.580e-4750.00CreA protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A1Q9F2P2_SYMMI7.060e-4650.63Uncharacterized protein n=3 Tax=Symbiodinium TaxID... [more]
A0A7S3PVU6_9STRA2.690e-4555.78Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A812IZF1_9DINO5.040e-4550.63CreA protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1418contigE-siliculosus-1a_F_contig1418:8306..13560 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size741
Model size1277
Exons5
Hectar predicted targeting categorychloroplast
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2S2V0@2759,COG3045@1
EggNOG free text desc.CreA protein
Seed eggNOG ortholog2880.D7FUW4
Seed ortholog evalue1.4e-125
Seed ortholog score455.7
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927931.2549083-UTR-E-siliculosus-1a_F_contig1418:8305..83651622927931.2549083-UTR-E-siliculosus-1a_F_contig1418:8305..8365Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1418 8306..8365 +
1696318742.6023035-UTR-E-siliculosus-1a_F_contig1418:8305..83651696318742.6023035-UTR-E-siliculosus-1a_F_contig1418:8305..8365Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1418 8306..8365 +
1622927931.3522637-UTR-E-siliculosus-1a_F_contig1418:13084..135601622927931.3522637-UTR-E-siliculosus-1a_F_contig1418:13084..13560Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1418 13085..13560 +
1696318742.6715713-UTR-E-siliculosus-1a_F_contig1418:13084..135601696318742.6715713-UTR-E-siliculosus-1a_F_contig1418:13084..13560Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1418 13085..13560 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927931.2748556-CDS-E-siliculosus-1a_F_contig1418:8365..85091622927931.2748556-CDS-E-siliculosus-1a_F_contig1418:8365..8509Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 8366..8509 +
1696318742.6127-CDS-E-siliculosus-1a_F_contig1418:8365..85091696318742.6127-CDS-E-siliculosus-1a_F_contig1418:8365..8509Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 8366..8509 +
1622927931.28966-CDS-E-siliculosus-1a_F_contig1418:10693..109211622927931.28966-CDS-E-siliculosus-1a_F_contig1418:10693..10921Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 10694..10921 +
1696318742.620502-CDS-E-siliculosus-1a_F_contig1418:10693..109211696318742.620502-CDS-E-siliculosus-1a_F_contig1418:10693..10921Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 10694..10921 +
1622927931.3061476-CDS-E-siliculosus-1a_F_contig1418:11441..115561622927931.3061476-CDS-E-siliculosus-1a_F_contig1418:11441..11556Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 11442..11556 +
1696318742.6291175-CDS-E-siliculosus-1a_F_contig1418:11441..115561696318742.6291175-CDS-E-siliculosus-1a_F_contig1418:11441..11556Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 11442..11556 +
1622927931.3221865-CDS-E-siliculosus-1a_F_contig1418:11930..120361622927931.3221865-CDS-E-siliculosus-1a_F_contig1418:11930..12036Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 11931..12036 +
1696318742.64089-CDS-E-siliculosus-1a_F_contig1418:11930..120361696318742.64089-CDS-E-siliculosus-1a_F_contig1418:11930..12036Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 11931..12036 +
1622927931.3339593-CDS-E-siliculosus-1a_F_contig1418:12936..130841622927931.3339593-CDS-E-siliculosus-1a_F_contig1418:12936..13084Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 12937..13084 +
1696318742.6557298-CDS-E-siliculosus-1a_F_contig1418:12936..130841696318742.6557298-CDS-E-siliculosus-1a_F_contig1418:12936..13084Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1418 12937..13084 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1418.2469.1prot_E-siliculosus-1a_F_contig1418.2469.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1418 8366..13084 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1418.2469.1

>prot_E-siliculosus-1a_F_contig1418.2469.1 ID=prot_E-siliculosus-1a_F_contig1418.2469.1|Name=mRNA_E-siliculosus-1a_F_contig1418.2469.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=247bp
MKWTSILPCVVGLCPASAFVAPSLIVKQGTSRVRASGACVGRQHDPSSSL
RNSAPTIIMSRGEEGEKWGAASETTRFARGVKAALTSAAIGLTLAGPMLS
LPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARP
VADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSFF
KSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE*
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mRNA from alignment at E-siliculosus-1a_F_contig1418:8306..13560+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1418.2469.1 ID=mRNA_E-siliculosus-1a_F_contig1418.2469.1|Name=mRNA_E-siliculosus-1a_F_contig1418.2469.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5255bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1418:8306..13560+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCTGCACCGCACCCTGTCTGCTGCTATCTCCCCCTATCTACGGCACGACC
GAGATACACAATGAAGTGGACAAGTATCCTTCCCTGTGTTGTGGGCCTTT
GCCCCGCCTCTGCATTCGTTGCGCCAAGCTTAATCGTCAAGCAAGGGACG
AGCCGAGTGAGAGCCTCAGGAGCTTGTGTCGGTCGACAACATGATCCCTC
TTCGGTAAGAGAGCGCTCACGGCAGCAGAGCAGAAGTAGCGCCAGCACCT
CTGCCCGTCGACGAGAAGACACATGCATAGTACATGGTGCTGCTAGTCTA
ACCCGATAGACTGCATCGGCTGTTGAGAGAGAATAGTCTAGCTGCACACG
TGAGTTTCAACCCCAACATTCAGACAGTCGGCGGAAGCTGATCCGCATGA
CGCATCGAGTTGCGTCCCACTCGGCAATACTACCCTGTGGCTGCCACGCA
CCAGCCGTTTGAGCACCCTGACCAAAGCAGCAATGCGTAAGGACTGGCTC
GTTCCGGTTTTGCTTCATCTCGGGTTTGCTTCGTCTTCAATTTGTTCGTG
AAGCTCTACATGGACATCGACACATGTTGCATGTTCAACTGGCCTGCACA
AATCTGTTGTCATGTTGTAATTTCTTCAACGGCCGGCGCACTTCGGCAGC
ATAGATCCCGTAATTAGGTGCAGACGCGTTTTGTGTGCGTATGGATGTAT
ACAATACCTGGGCTCGTTTTCAGGTATGGTACGTGGCAGAGTGTCGAAAG
CTGGTCTAGGGGAGAATTGGGGGTAGAAGCAATTTTCGCGGATGCAAAGG
GAGGGCATTGGAGGACAGAGATATGCACCTGCAGTCTTTACTACAGCAGT
AGCTTCAAAACAATCCAACACACATCCACAGATGGACCGAAGGCTAAGGC
TCGGACAACTCCACGCCCTGCCAGCACCGGAGGTGCATCGTGGGTATCGC
AATGAAGAGCGAGAGACCGTGACAGGGGTAAACTCGCGTGGCTTCTTTGG
TTTGGCGTTGGATTGTTGTTCAGCAGCATAGATCAATCCCTGAAGCAGTT
GCCGGCTGCAACTACTGCTGTGCTCGAAAGCGGTCTGTGTATTACCACCA
TTTTGTCACACACCCTTGCTACATTCATGGCAAACTATCCCATATGTATA
TGTACCATTTCCCCTGTTGTCGTGCTTCGGGACATCTTTTGCTGGCGGAA
GCGAGTCTTTTCTCACGCTTGCTTCTCAGGGGCGCGCAGAGAGATCGTCG
GTACATTTCCGCGCACGCCCGAGGACCGCCAGCCACCCGTGGCGCTTGTG
CTTGACGCCCAAAGTTGAAAAAATTGGCTCTACATCCGGAGCACGTGTTC
CTCGCGAAGAAAACCTTCACAAGAAACACAAGAAAAACCGCTTTGCATAA
ACAGGAAGACTTTTGTTTTGATTCCTGCGCAACGCACACAAGTCCCACAA
ACCATGGGCAACACGAATACATAAATGAGCGAGTGATCAAGCGCAAGGAT
TACAGCAGTAGGACCTGCAGCAAAGACACCACTAGCCTAATAGCACAGCC
TCACGCACAAGCCACGGCGAGAAAAAAACAACCCACACATGATGCAAATT
CCAGGCAACTTCTGCAGGTTGTACGCAAAACCGCCACTCACTACCGAACG
CCATGACGTTGGGATGCAACGATGCGACCGCGATGACATGTGCCATGTCC
TCTTGCATCGCCCCCGGGAGGCAAGCCGCCTAACTCCCGAGGGGGAGCTT
TGTATCAAGTATTGTATTGTTTAGTTTTAAACAGATCAGGGTAAATCGTT
CCCTCTATCCGAACCGCGCGAATAGCTGCGCTCTGTCAAGATGATGATAA
CGTGATCTGAGGTCCTGAGGTACCACCAAACATCAACGAACGTTAGAGAT
ACCCTGCGTGCGCGGGCCATTAAGCAACAAACCTGCAATCGGAGAATATC
GCCTTTTCAGTGTGATCATAACCCCGCTTTCTGCAACAGATTTTCCCGCT
AGAGCACACAACAGAAGAGAAGAGAAACACGCGCTCTCCCCGGACACGTA
GAATACCGCAGCAACAGCGGTGTATACATCCAAACATAACATTTTTCGAA
TGTTTACTTTTTTGTCAGTGCGGCTGGCGGGCAGTCTTGTTTCCCTTGCG
GGCATTATTCCGGTTGCCTGTACGGTGCTGGCAATAGCTCTCCGACCGTC
GATAAGTCTCCGGTCTTTCGTCTGGATGAGAAGAAGCCGTGGAGCAACCA
CTGGCAGATCGTTGAGGAACGAAGTAATGACAATCCTACATGTTGCTAGC
GATTTGCATTCACGCCTCTCTCCGCGCTGTTGCCTCTTGTGGTGCTGATG
CCTCCCTCTACCCACAAATGCACCCCAAACACCAGCAGTCGCTGCGAAAC
TCCGCCCCGACCATAATCATGTCACGAGGAGAAGAGGGAGAAAAATGGGG
AGCAGCTTCAGAAACGACGCGCTTTGCCCGGGGCGTAAAGGCGGCACTAA
CGTCTGCAGCGATCGGGTTGACCCTTGCGGGGCCGATGCTATCCCTACCA
GGCACGGCGAGCGCCGGGGACAAGAGGACGGTCGGGGAAATCTCTGCAAG
CGGGTTGGTGTTTAAGGTGAGCCGGCTGGCCGATCGAGTTGACAAGCCAG
CCATCGCGGTTATGTAGCTCTGACAAGATCGGTACATAAGGTTTTGTTTG
TACGGAACGTACCAGAGTGGTGTGATTTTTCTAAATTGTACCATCCCGCG
ACTTACTACGTGGAACTGCTGCAACGGCGAAGTACCGGGCTTTTGAGCGT
TGCTCCTGCCCCCTACCCCACGTGGGCCCCTTCCGCGACTCGAAAAACAT
CCCGGTAACTCTCGACCTGTTCACACCACAAGTACATGAGCGAGGGCGTG
TTTCGACTCCTACGGTCATCAAGGGCATACCCTCTCTCCTACAGGGACAG
CAGCTGTCACGCAGGGATGCTTTACGCACTTGTCGAGAGGACCGTAGTTC
CCACATGTGTTTTGATTCCCGTACCTAAGTCACCATGAGCACGAAGAAAG
GGTGTTCAAAGATATATATCATGCGAGTTTTGTCGGTTGACGTGTGAAAC
CGTTTCTGTGCCGCGGTGTGAACCCGTTGTCGACAGGACAAGCTTAACGT
GGAGGCGTTTTCTGACCCCAAGGTGAAGGGAGTAACCCTCTATCTGTCGG
ATTTTGCCCGCCCGGTGGCAGATAAACTCATGAACGGGGACATTTTTTCA
GGTAAAGCGCATCGATACTTCCTCCCGCACAGGGGTGCCAGCTGGTGTTT
TCTGTGTATTGGAGTGCTTGGATGTCTTTTTCTTTGTATCTCGCCGACAA
GAGCGGTGTATTTATGCATACGATGGTGCGTACTTGGGCGCCCTCTGATT
ACCGAACTCTGCCCAAAGTTATGTACACGATGGCTGCGCCACGACTTGAT
TGGAGCCTCTCGGTGTTGTTCTCTCTCGATACGAACCCGAGGGGTGCCGC
GAAGGCGCGCTTAGCTTCCATTATTCACCAACCGAAGCCGCACACCAGTT
CACCGACCCATCGCACTTGCCCCCATTGTTATCGGACGTTTTGTATGTCT
TGCCGGTGGGCTGGACGATGTACAGACCCTTCCTCGGCAGCTTTGTTCTG
CGTGCGGTCGGGGCCGATGGAGGTGAAGGACGGCATCAGCACGTCCAAGG
AAGGGGAGGAGCTGTTCAAGGAAGACCGCAGGTACAACAGCAGCATACTT
ACCGATGAACCTTCGAAACACGTCGCGGTGGCGCTTAGAATCCTCCGCGC
TTGCCTCTAGCGCGTGGTAGACATATCATACGCCCGACACCTTTTCCTTG
CTCGTTCTTGCGGGTGGTTCCGACGTTGCGGTTATTCCGCACTTGGTGCC
CACAACGTGGGGCAATGCATCGAACAGGACTATCTTAAAACAGAGCATTA
TCTCTGTTGGGAACGTAGCGTGCTTGATTTTGTTTCGTTGTTGATGAGTC
CATACCTTGTGCTGTCGGAAGTCGATCCTGGAGAAGGTATTGGTGATTTC
GACTCGAAATGGTGGCTATATACCCAGAGCACCCTATAGAGGGAGTCTGC
CCGCGCTATCCGTTGGTATAGAGAGCTACAGGGAAGACTACACGTCGTCG
ACCAATAGGAACGGCACGGTCGAGAAATGTTCGAAGTTTTGAGGAGGACG
GAAATGCGTCTTTCGCCACCCCAGCTTGCCGTACTGGAGGCATGTCGGAG
CTGATGACCCTGACATATAGCATCCTTTTTCCTTGGGCACGTGATGGTGA
TAGTGTTGAGAGGGTACAGTACGGGCTTAGAGATGTTGTGCCGAACCGCC
CAATCAAGACCAGGAAAGTTTACGATGACGGCAATTTAGGGAAGATCAGA
TCCGCGAGCGTGCCGTGCTCCTCTTGGATTTTTATACTCCCGGTTCATGC
GACGTTTCCTGCCCCCAGGGCGCATTTCAACTCGACTACTTTCACGCCAA
TTGAAAGAGACACGAGGGCAGCCACCGCTCATCATCTCTCGAGGCTAGCG
TTTCAGATACATACCCCACCGTTCTTCCTTCCCGCGCCCGCTAATGTAAG
TCCCTCCTCCTTGATCGTTACCATGTCCCAGTTTTTTCAAGTCTATCGTA
GTGCGCCGGCTCTACGACAAGGAAGCCAACAATATCGTCTACGTGTCGTA
CTCGTCAAAGCTAGACACCGGCTCCGACGGCAACAAGAGCCGCTTCAAGA
GCTCGCTGTGCGCGCTGCACATCGAGTAGAAGCGGAGCGCGACTCGTCGG
TGATGTCCATGGCGAAGGGGGCCCAGTGCTAGAGATTGGAAGCCCAGCCC
AATAGGGACTGCAACGCTGAGGCTTGTGCGTGTATATTAGTGCAATGCGA
GTTTGGGGAGGTGGGTGGTCTAGAGCGTTGCGCAGACGAGCGTGAGGACG
TGCGTTTGGATGTCTTCCCTGCGCTGGTTGTTGCAGGTCCGTACGGAACG
ATTTATTCCCTAGCGTAGTCTTCCTAACAGCTGTATGTAAGCGATCTCCT
GAGTGACAAAAATGAAACCCCACCGGGAAAATGCTTTTTGCAGTTGTTGC
ACTTGGGTCGGTCCGAGTTCCTTGTAGACCAGCTTGATGGTGGCATCTTC
TTGCGGGGCCTTTCCTCCGTTCCATACATCGACGACGATGACGGCATGGA
AGAGTAAGCGTTTCGAGAACGATGGGCTCGTACAGGGGCCATCGATGTTG
AGTAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1418:8306..13560+

>mRNA_E-siliculosus-1a_F_contig1418.2469.1 ID=mRNA_E-siliculosus-1a_F_contig1418.2469.1|Name=mRNA_E-siliculosus-1a_F_contig1418.2469.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1482bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1418:8306..13560+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAGTGGACAAGTATCCTTCCCTGTGTTGTGGGCCTTTGCCCCGCCTC
TGCATTCGTTGCGCCAAGCTTAATCGTCAAGCAAGGGACGAGCCGAGTGA
GAGCCTCAGGAGCTTGTGTCGGTCGACAACATGATCCCTCTTCGATGAAG
TGGACAAGTATCCTTCCCTGTGTTGTGGGCCTTTGCCCCGCCTCTGCATT
CGTTGCGCCAAGCTTAATCGTCAAGCAAGGGACGAGCCGAGTGAGAGCCT
CAGGAGCTTGTGTCGGTCGACAACATGATCCCTCTTCGTCGCTGCGAAAC
TCCGCCCCGACCATAATCATGTCACGAGGAGAAGAGGGAGAAAAATGGGG
AGCAGCTTCAGAAACGACGCGCTTTGCCCGGGGCGTAAAGGCGGCACTAA
CGTCTGCAGCGATCGGGTTGACCCTTGCGGGGCCGATGCTATCCCTACCA
GGCACGGCGAGCGCCGGGGACAAGAGGACGGTCGGGGAAATCTCTGCAAG
CGGGTTGGTGTTTAAGTCGCTGCGAAACTCCGCCCCGACCATAATCATGT
CACGAGGAGAAGAGGGAGAAAAATGGGGAGCAGCTTCAGAAACGACGCGC
TTTGCCCGGGGCGTAAAGGCGGCACTAACGTCTGCAGCGATCGGGTTGAC
CCTTGCGGGGCCGATGCTATCCCTACCAGGCACGGCGAGCGCCGGGGACA
AGAGGACGGTCGGGGAAATCTCTGCAAGCGGGTTGGTGTTTAAGGACAAG
CTTAACGTGGAGGCGTTTTCTGACCCCAAGGTGAAGGGAGTAACCCTCTA
TCTGTCGGATTTTGCCCGCCCGGTGGCAGATAAACTCATGAACGGGGACA
TTTTTTCAGGACAAGCTTAACGTGGAGGCGTTTTCTGACCCCAAGGTGAA
GGGAGTAACCCTCTATCTGTCGGATTTTGCCCGCCCGGTGGCAGATAAAC
TCATGAACGGGGACATTTTTTCAGACCCTTCCTCGGCAGCTTTGTTCTGC
GTGCGGTCGGGGCCGATGGAGGTGAAGGACGGCATCAGCACGTCCAAGGA
AGGGGAGGAGCTGTTCAAGGAAGACCGCAGACCCTTCCTCGGCAGCTTTG
TTCTGCGTGCGGTCGGGGCCGATGGAGGTGAAGGACGGCATCAGCACGTC
CAAGGAAGGGGAGGAGCTGTTCAAGGAAGACCGCAGTTTTTTCAAGTCTA
TCGTAGTGCGCCGGCTCTACGACAAGGAAGCCAACAATATCGTCTACGTG
TCGTACTCGTCAAAGCTAGACACCGGCTCCGACGGCAACAAGAGCCGCTT
CAAGAGCTCGCTGTGCGCGCTGCACATCGAGTAGTTTTTTCAAGTCTATC
GTAGTGCGCCGGCTCTACGACAAGGAAGCCAACAATATCGTCTACGTGTC
GTACTCGTCAAAGCTAGACACCGGCTCCGACGGCAACAAGAGCCGCTTCA
AGAGCTCGCTGTGCGCGCTGCACATCGAGTAG
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