mRNA_E-siliculosus-1a_F_contig1409.2418.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: A0A7S2XHW8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XHW8_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.810e-19 Identity = 59/183 (32.24%), Postives = 83/183 (45.36%), Query Frame = 1
Query: 1 QLFMFGGYGG-SGRLDDFWEFDFETRIWKEVHCQGPS-PGVRENNGVVEYKGSLYXXXXXXXXXXXXXFHVSRLPRLTFWAIHRISYGIENQSFVFLLSSRCVCPXXXXXXXXXXXXXXCCSALMIAETRTWRKVEPAGAPPVSRFGYVAVVHSHYFCLFGGYDGTTWLNDMHRFNFGEDIYT 543
+LF+FGGYGG +GRLDDFW + F+T W+EV PG RENNGVV GS T W + ++ Q + + S A+ + + G P RFGYV++VH++ F +FGG+DG+ WLNDM+ F+F +T
Sbjct: 67 KLFVFGGYGGGTGRLDDFWSYSFDTATWEEVEVLSTEKPGCRENNGVVIGDGSRIFLFGGYNG--------------TSWLNDLWMFDLDTQRWTCIQESS---------DPNAQPGDESSMAMGSSFSGVQHGTLVRGTVPSRRFGYVSIVHNNKFVVFGGFDGSKWLNDMYEFDFQTKTWT 226
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: A0A6V2E5J1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2E5J1_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 4.480e-19 Identity = 63/183 (34.43%), Postives = 83/183 (45.36%), Query Frame = 1
Query: 1 QLFMFGGYGG-SGRLDDFWEFDFETRIWKEVHC-QGPSPGVRENNGVVEYKGSLYXXXXXXXXXXXXXFHVSRLPRLTFWAIHRISYGIENQSFVFLLSSRCVCPXXXXXXXXXXXXXXCCSALMIAETRTWRKVEPAGAPPVSRFGYVAVVHSHYFCLFGGYDGTTWLNDMHRFNFGEDIYT 543
+L+MFGGYGG +GRLDDF+ F F+T W+EV+ PG RENNGVV S T W + I+ Q + + S P SAL + P RFGYV+VVH++ F LFGG+DG+ WLNDM+ F+F +T
Sbjct: 116 RLYMFGGYGGGTGRLDDFYSFSFDTCTWEEVNVLSAEKPGCRENNGVVIGDSSRVYLFGGYNG--------------TAWLNDLWMFDIDTQRWTCIQESSDPRPHTNDDSN---------SAL-----GDHPRPRLGSTVPSRRFGYVSVVHNNKFVLFGGFDGSRWLNDMYEFDFETKTWT 270
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: D7G0Q0_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Q0_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.870e-18 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 1
Query: 1 QLFMFGGYGGSGRLDDFWEFDFETRIWKEVHCQGPSPGV 117
+LFMFGGYGGSGRLDDFWEFDFE+RIWKEVHCQGPSPGV
Sbjct: 44 KLFMFGGYGGSGRLDDFWEFDFESRIWKEVHCQGPSPGV 82
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: A0A7S4R3C5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R3C5_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.160e-18 Identity = 63/183 (34.43%), Postives = 83/183 (45.36%), Query Frame = 1
Query: 1 QLFMFGGYGG-SGRLDDFWEFDFETRIWKEVHC-QGPSPGVRENNGVVEYKGSLYXXXXXXXXXXXXXFHVSRLPRLTFWAIHRISYGIENQSFVFLLSSRCVCPXXXXXXXXXXXXXXCCSALMIAETRTWRKVEPAGAPPVSRFGYVAVVHSHYFCLFGGYDGTTWLNDMHRFNFGEDIYT 543
+L+MFGGYGG +GRLDDF+ F F+T W+EV+ PG RENNGVV S T W + I+ Q + + S P SAL + P RFGYV+VVH++ F LFGG+DG+ WLNDM+ F+F +T
Sbjct: 116 RLYMFGGYGGGTGRLDDFYSFSFDTCTWEEVNVLSAEKPGCRENNGVVIGDSSRVYLFGGYNG--------------TAWLNDLWMFDIDTQRWTCIQESSDPRPHTNDDSN---------SAL-----GDHPRPRLGSTVPSRRFGYVSVVHNNKFVLFGGFDGSRWLNDMYEFDFETKTWT 270
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: A0A7S2GQF3_9STRA (Hypothetical protein n=6 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2GQF3_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 4.020e-18 Identity = 65/185 (35.14%), Postives = 83/185 (44.86%), Query Frame = 1
Query: 1 QLFMFGGYGG-SGRLDDFWEFDFETRIWKEVHC-QGPSPGVRENNGVVEYKGSLYXXXXXXXXXXXXXFHVSRLPRLTFWAIHRISYGIENQSFVFLLSSRCVCPXXXXXXXXXXXXXXCCSALMIAETRTWRKVEPA--GAPPVSRFGYVAVVHSHYFCLFGGYDGTTWLNDMHRFNFGEDIYT 543
+L+MFGGYGG +GRLDDF+ F F+T W+EV+ PG RENNGVV S T W + I+ Q R C SAL + PA P RFGYV+VVH + F LFGG+DG+ WLNDM+ F+F + +T
Sbjct: 76 RLYMFGGYGGGTGRLDDFYSFSFDTCTWEEVNVLSAEKPGCRENNGVVIGDSSRVYLFGGYNG--------------TAWLNDLWMFDIDTQ--------RWTCIQESSDPHSHSTADDSNSALGDPP-----RPRPALGSTVPSRRFGYVSVVHDNKFVLFGGFDGSRWLNDMYEFDFRTNTWT 233
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: A0A835YYB0_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB0_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 6.730e-18 Identity = 68/175 (38.86%), Postives = 81/175 (46.29%), Query Frame = 1
Query: 1 QLFMFGGYGGSGRLDDFWEFDFETRIWKEVHCQGPSPGVRENNGVVEYKGSLYXXXXXXXXXXXXXFHVSRLPRLTFWAIHRISYGIENQSFVFLLSSRCVCPXXXXXXXXXXXXXXCCSALMIAETRTWRKVEPAGAPPVSRFGYVAVVHSHYFCLFGGYDGTTWLNDMHRFNF 525
+++MFGGYGGSGRLDDF+EFDF+TR+W+ + GP XXXXXXXXXXXXX L+I ET P +RFGYV+ VH HYF LFGGYDG+TWLNDMHRF+F
Sbjct: 58 KMYMFGGYGGSGRLDDFFEFDFDTRVWRRLEYSGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------XXLVIPETPLI---------PAARFGYVSAVHRHYFVLFGGYDGSTWLNDMHRFDF 180
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: K0T9I1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9I1_THAOC) HSP 1 Score: 89.0 bits (219), Expect = 6.780e-18 Identity = 66/177 (37.29%), Postives = 84/177 (47.46%), Query Frame = 1
Query: 1 QLFMFGGYGG-SGRLDDFWEFDFETRIWKEVHCQGPS-PGVRENNGVVEYKGS-LYXXXXXXXXXXXXXFHVSRLPRLTFWAIHRISYGIENQSFVFLLSSRCVCPXXXXXXXXXXXXXXCCSALMIAETRTWRKVEPAGAPPVSRFGYVAVVHSHYFCLFGGYDGTTWLNDMHRFN 522
+L+MFGGYGG +GRLDDF+ F FE W+ V PG RENNGVV GS +Y F +T ++ + +FL +R C SAL E + R AG P RFGYV+VVH + F LFGG+DG+ WLNDM F+
Sbjct: 83 KLYMFGGYGGGTGRLDDFYSFSFEENKWEVVEVLSQERPGCRENNGVVIGDGSRMYLFGGYNGSSWLNDFQEV----VTVFSSPPCPSVVLTHKCLFLPPNRWTCIQESSDELSDELS----SALGNLERQ--RAQHHAGGPS-RRFGYVSVVHKNKFVLFGGFDGSRWLNDMFEFD 248
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: A0A1Z5J8G5_FISSO (BTB domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8G5_FISSO) HSP 1 Score: 90.5 bits (223), Expect = 7.360e-18 Identity = 62/185 (33.51%), Postives = 84/185 (45.41%), Query Frame = 1
Query: 1 QLFMFGGYGG-SGRLDDFWEFDFETRIWKEVHCQGP-SPGVRENNGVV--EYKGSLYXXXXXXXXXXXXXFHVSRLPRLTFWAIHRISYGIENQSFVFLLSSRCVCPXXXXXXXXXXXXXXCCSALMIAETRTWRKVEPAGAPPVSRFGYVAVVHSHYFCLFGGYDGTTWLNDMHRFNFGEDIYT 543
+L++FGGYGG +GRLDDF+ +DFE+ W+EVH PG RENNGVV + +Y W + IE + + + S P +M+ + K G P RFGYV+VVH F LFGG+DG+ WL+DMH F F +T
Sbjct: 65 KLYVFGGYGGGTGRLDDFYSYDFESNEWQEVHVLSEYRPGCRENNGVVISDSSSEIYLFGGYNGNS---------------WLNDLWKFDIETKCWTCIQESSDPFPADDDTDAAVGD-------VMMGPVQPPVK----GKIPCRRFGYVSVVHRGKFILFGGFDGSRWLSDMHIFVFETRTWT 223
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: A0A7J6PHS8_PEROL (Leucine-zipper-like transcriptional regulator 1 n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PHS8_PEROL) HSP 1 Score: 90.1 bits (222), Expect = 1.070e-17 Identity = 53/174 (30.46%), Postives = 69/174 (39.66%), Query Frame = 1
Query: 22 YGGSGRLDDFWEFDFETRIWKEVHCQGPSPGVRENNGVVEYKGSLYXXXXXXXXXXXXXFHVSRLPRLTFWAIHRISYGIENQSFVFLLSSRCVCPXXXXXXXXXXXXXXCCSALMIAETRTWRKVEPAGAPPVSRFGYVAVVHSHYFCLFGGYDGTTWLNDMHRFNFGEDIYT 543
YGGSGRLDD ++FDF TR+W +VH +G +P RENNG V K ++Y +G +PP +RFGYV+ VH F +FGGYDG TWLNDMH F+ E ++
Sbjct: 241 YGGSGRLDDLFKFDFNTRLWSQVHTKGETPTGRENNGAVVIKNNMYL------------------------------FGXXXXXXXXXXXXX----------------------XXXXXXXXXXXXXXXXSPPSTRFGYVSSVHGSVFFVFGGYDGQTWLNDMHEFDVDEGTWS 362
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Match: B7FP97_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FP97_PHATC) HSP 1 Score: 86.3 bits (212), Expect = 2.030e-16 Identity = 61/185 (32.97%), Postives = 83/185 (44.86%), Query Frame = 1
Query: 1 QLFMFGGYGG-SGRLDDFWEFDFETRIWKEVHCQGPS-PGVRENNGVV--EYKGSLYXXXXXXXXXXXXXFHVSRLPRLTFWAIHRISYGIENQSFVFLLSSRCVCPXXXXXXXXXXXXXXCCSALMIAETRTWRKVEPAGAPPVSRFGYVAVVHSHYFCLFGGYDGTTWLNDMHRFNFGEDIYT 543
+L++FGGYGG +GRLDDF+++ FET W EV + PG RENNGVV + S+Y W + IE+Q + + S S + A + G P RFGYV+VVH F LFGG+DG+ WLNDM F+F ++
Sbjct: 17 RLYVFGGYGGGTGRLDDFFQYSFETGQWDEVKVLSEAKPGRRENNGVVISDSSRSIYLFGGYNGSS---------------WLNDLWKFDIESQRWTCIQESS---------DPDRADDANAASGDVPAGHQV------RGKAPSRRFGYVSVVHEGKFVLFGGFDGSRWLNDMFEFDFSTKTWS 171 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1409.2418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1409.2418.1 >prot_E-siliculosus-1a_F_contig1409.2418.1 ID=prot_E-siliculosus-1a_F_contig1409.2418.1|Name=mRNA_E-siliculosus-1a_F_contig1409.2418.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=179bp MFGGYGGSGRLDDFWEFDFETRIWKEVHCQGPSPGVRENNGVVEYKGSLYback to top mRNA from alignment at E-siliculosus-1a_F_contig1409:3100..4819- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1409.2418.1 ID=mRNA_E-siliculosus-1a_F_contig1409.2418.1|Name=mRNA_E-siliculosus-1a_F_contig1409.2418.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1720bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1409:3100..4819- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1409:3100..4819- >mRNA_E-siliculosus-1a_F_contig1409.2418.1 ID=mRNA_E-siliculosus-1a_F_contig1409.2418.1|Name=mRNA_E-siliculosus-1a_F_contig1409.2418.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1074bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1409:3100..4819- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |