mRNA_E-siliculosus-1a_F_contig14037.2392.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: D8LP31_ECTSI (EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP31_ECTSI) HSP 1 Score: 287 bits (735), Expect = 2.720e-90 Identity = 142/147 (96.60%), Postives = 143/147 (97.28%), Query Frame = 2
Query: 2 AYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTPQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
AYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFR YT+KTKYGIECGPVVGSLDIIRQRPVDSVG MDGSVLGSIHLTYGERAGVAA AACNTPQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVS NL
Sbjct: 287 AYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRTYTEKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIHLTYGERAGVAAMAACNTPQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSNNL 433
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE) HSP 1 Score: 230 bits (587), Expect = 2.740e-67 Identity = 119/147 (80.95%), Postives = 122/147 (82.99%), Query Frame = 2
Query: 2 AYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTPQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
AYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYT+KTKYGIECGPVVGSLDIIRQRPVDSVG MDGSVLGSIHLT +R+ V AKLTEIMAHFDSQLWKTRKRLKMANTVSTNL
Sbjct: 287 AYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTEKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIHLTAAQRSSTL------------------VSAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 415
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI) HSP 1 Score: 168 bits (426), Expect = 7.230e-46 Identity = 79/146 (54.11%), Postives = 105/146 (71.92%), Query Frame = 2
Query: 5 YIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTPQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
Y +LE+AC++KYIEG HV D Y F+AT +APGD IA L ++Y + +K+G+E G VVG +D+IR +PV+++G +DG VLG+I TYGERA +AACN + G TLFD SV KL EIMAHFD +LWK RK+ K+ V+ NL
Sbjct: 283 YTLLEKACENKYIEGVHVADVYAAFRATMTAPGDMNSIAALVQSYKEHSKHGVESGAVVGIIDVIRDKPVEAIGKIDGGVLGTIFQTYGERACAEVRAACNKLESGSTLFDDSVSNKLREIMAHFDCELWKARKKEKVERIVAANL 428
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE) HSP 1 Score: 161 bits (408), Expect = 2.020e-43 Identity = 75/146 (51.37%), Postives = 102/146 (69.86%), Query Frame = 2
Query: 5 YIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTPQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
Y MLE+AC+DKYIEG H+ D Y +F+AT +AP D IA L R+Y K+G+E G VVG +D+IR + V+++G +DG VLGSI YGERA + +A C+ +GG +LFD SV KL EI+AHFD +LWK RK+ K+ V+ N+
Sbjct: 286 YTMLEKACEDKYIEGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFSAYGERACLKVQAECSRLEGGSSLFDDSVSNKLAEILAHFDCELWKARKKDKVERVVAANM 431
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE) HSP 1 Score: 157 bits (398), Expect = 4.890e-42 Identity = 73/146 (50.00%), Postives = 101/146 (69.18%), Query Frame = 2
Query: 5 YIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTPQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
Y MLE+AC+DKYI+G H+ D Y +F+AT +AP D IA L R+Y K+G+E G VVG +D+IR + V+++G +DG VLGSI YGERA + + C+ +GG +LFD SV K TEI+AHFD +LWK RK+ K+ V+ N+
Sbjct: 286 YTMLEKACEDKYIKGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFSAYGERACLKVQPECSRLEGGSSLFDDSVSNKQTEILAHFDCELWKARKKDKVERVVAANM 431
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: B2KWI7_ECTSI (EsV-1-213-like protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI7_ECTSI) HSP 1 Score: 156 bits (395), Expect = 7.660e-42 Identity = 73/146 (50.00%), Postives = 101/146 (69.18%), Query Frame = 2
Query: 5 YIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTPQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
Y MLE+AC+ KYI+G H+ D Y +F+AT +AP D I L R+Y K+G+E G VVG +D+IR + V+++G +DG VLGSI YGERA + +A C+ +GG +LFD SV KLTEI+AHFD +LWK RK+ K+ V+ N+
Sbjct: 286 YTMLEKACEHKYIKGVHIADVYAVFRATMTAPDDMNSITALVRSYIQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFPAYGERACLKVQAECSGLEGGSSLFDDSVSNKLTEILAHFDCELWKARKKDKVERVVAANM 431
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: D7FZG9_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG9_ECTSI) HSP 1 Score: 139 bits (350), Expect = 8.960e-36 Identity = 73/147 (49.66%), Postives = 101/147 (68.71%), Query Frame = 2
Query: 5 YIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTPQGGP-TLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
Y+ LERA ++ YI G HV D + L+ ATRSAPGDA+ IA L Y +K G+E G VV LD++R++P+++VG +DGSVLG+I TYG+R + +A C Q G +LFD+SV KL EI+ H D++LWK RKRLK+ V+ +L
Sbjct: 91 YVCLERATEESYIGGKHVADCFALYNATRSAPGDAKTIAGLVNHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGKRVSLDVQARCLGLQAGEHSLFDSSVSNKLGEIINHADTKLWKARKRLKVELKVNDSL 237
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: D7FHJ1_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHJ1_ECTSI) HSP 1 Score: 136 bits (342), Expect = 6.570e-35 Identity = 65/145 (44.83%), Postives = 95/145 (65.52%), Query Frame = 2
Query: 11 MLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTP-QGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
MLE+ ++YIEG +V DAY +++ T SAPGDA+ I L AY D +K+G++ +VG +D++R +P D +G +DG VLG+I TYGE+ V + CN QGG TLFD SV KL E++ HFD ++ + RK+ KM + N+
Sbjct: 146 MLEKFSGERYIEGLYVADAYAVYRGTMSAPGDAKSITALVNAYRDHSKHGVDSSAIVGIIDVLRCKPSDGIGKIDGGVLGTIFYTYGEKDSVRVQEDCNNKLQGGVTLFDYSVSGKLGEVITHFDKEIPRARKKHKMEMIIRGNM 290
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K) HSP 1 Score: 137 bits (344), Expect = 1.260e-34 Identity = 73/147 (49.66%), Postives = 98/147 (66.67%), Query Frame = 2
Query: 5 YIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTPQGGP-TLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
Y+ LERA ++ YI G HV D + L+ ATRSAPGDA+ IA L Y +K G+E G VV LD++R++P+++VG +DGSVLG+I TYG+R + +A C Q G +LFD SV KL EI+ H D LWK RKRLK+ V+ +L
Sbjct: 281 YVCLERATEESYIGGKHVADCFALYNATRSAPGDAKTIAGLANHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGQRVSLDVQARCLGLQAGEHSLFDCSVSNKLGEIINHADIALWKARKRLKVELKVNDSL 427
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE) HSP 1 Score: 133 bits (335), Expect = 2.290e-33 Identity = 72/147 (48.98%), Postives = 97/147 (65.99%), Query Frame = 2
Query: 5 YIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGIECGPVVGSLDIIRQRPVDSVGHMDGSVLGSIHLTYGERAGVAAKAACNTPQGGP-TLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNL 442
Y+ LERA +D YI G HV D + L+ ATRSAPGDA+ I L Y +K G+E G VV LD++R++P+++VG +DGSVLG+I TYG+R + +A C Q G +LFD SV KL EI+ H D +LWK RKRL + V+ +L
Sbjct: 816 YVCLERATEDCYIGGKHVADCFALYNATRSAPGDAKTIKGLVNHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGKRVSLDVQARCLGLQAGEHSLFDCSVSNKLGEIINHADMKLWKARKRLIVELKVNDSL 962 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14037.2392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14037.2392.1 >prot_E-siliculosus-1a_F_contig14037.2392.1 ID=prot_E-siliculosus-1a_F_contig14037.2392.1|Name=mRNA_E-siliculosus-1a_F_contig14037.2392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=144bp MLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTDKTKYGback to top mRNA from alignment at E-siliculosus-1a_F_contig14037:2..443+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14037.2392.1 ID=mRNA_E-siliculosus-1a_F_contig14037.2392.1|Name=mRNA_E-siliculosus-1a_F_contig14037.2392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=442bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14037:2..443+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14037:2..443+ >mRNA_E-siliculosus-1a_F_contig14037.2392.1 ID=mRNA_E-siliculosus-1a_F_contig14037.2392.1|Name=mRNA_E-siliculosus-1a_F_contig14037.2392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=864bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14037:2..443+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |