mRNA_E-siliculosus-1a_F_contig1400.2372.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1400.2372.1
Unique NamemRNA_E-siliculosus-1a_F_contig1400.2372.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: D7FHL0_ECTSI (Ribose-phosphate pyrophosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL0_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 1.960e-101
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 
Query:  385 ALCIIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVHKAMPFAELLTWNNPTSKGLPPRTLTRANLNDPSFAKGDGPRWPGGEPR 822
            ALCIIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVHKAMPFAELLTWNNPTSKGLPPRTLTRANLNDPSFAKGDGPRWPGGEPR
Sbjct:   35 ALCIIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVHKAMPFAELLTWNNPTSKGLPPRTLTRANLNDPSFAKGDGPRWPGGEPR 180
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: A0A6H5JRR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR1_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 2.420e-86
Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 1 
Query:  394 IIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVHKAMPFAELLTWNNPTSKGLPPRTLTRANLNDPSFAKGDGPRWPGGEPR 822
            IIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEIKDRSSC+KIRELSVAPLLAEAIYRVHKAMPFAELLTW+NPTSKGLPPRTLTRANLNDP FAKGDGP WPGGEPR
Sbjct:  888 IIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEIKDRSSCSKIRELSVAPLLAEAIYRVHKAMPFAELLTWSNPTSKGLPPRTLTRANLNDPYFAKGDGPLWPGGEPR 1030
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: D7FHK9_ECTSI (Phosphoribosylpyrophosphate synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK9_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 6.630e-77
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 1 
Query:    1 QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGGGAVAKRLSQARPEEPTRIVVVAPQEGQVGRANAFKSRIEQYVETETTPIGLAFIARSSTKREDEEEEVHKHCIGDVKG 384
            QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGGGAVAKRLSQARPEEPTRIVVVAPQEGQVGRANAFKSRIEQYVETET PIGLAFIARSSTK+EDEEEEVHKHCIGDVKG
Sbjct:  233 QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGGGAVAKRLSQARPEEPTRIVVVAPQEGQVGRANAFKSRIEQYVETETNPIGLAFIARSSTKKEDEEEEVHKHCIGDVKG 360
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: A0A6H5JA79_9PHAE (Pribosyltran_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA79_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 2.950e-74
Identity = 122/128 (95.31%), Postives = 124/128 (96.88%), Query Frame = 1 
Query:    1 QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGGGAVAKRLSQARPEEPTRIVVVAPQEGQVGRANAFKSRIEQYVETETTPIGLAFIARSSTKREDEEEEVHKHCIGDVKG 384
            QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTG GAVAKR S+AR EEPTRIVVVAPQEGQVGRANAFKSRIEQYVETET PIGLAFIARSSTK+EDEEEEVHKHCIGDVKG
Sbjct:  171 QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGSGAVAKRFSRARLEEPTRIVVVAPQEGQVGRANAFKSRIEQYVETETDPIGLAFIARSSTKKEDEEEEVHKHCIGDVKG 298
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: A0A835YZZ4_9STRA (Phosphoribosyltransferase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZZ4_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.250e-53
Identity = 119/250 (47.60%), Postives = 144/250 (57.60%), Query Frame = 1 
Query:    1 QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGGGAVAKRLSQARPEEPTRIVVVAPQEGQVGRANAFKSRIEQYVETETTPIGLAFIARSSTKREDEEEEVHKHCIGDVKGALCIIVDDMVDTGGTLDNAVRLLKGAGARKILAFAT---------------HGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVHKAMPFAELL 705
            QGFF P TP+DHL P GVAAAY  E++ E      + D          G  A+A      R     R+VVVAPQEGQV RAN FK ++  Y+  E +  G               EE+HKH IGDVKG+LCI+VDD+VDTG TL NAV++L  AGA KI A+A                HGRFS GG+     +  LD LVI NTLPHR  +G I +R    K REL++APLLAEAIYR+HK +PF ELL
Sbjct:  210 QGFFGPNTPMDHLMPTGVAAAYFSEIIQE------MSDH---------GDHALALAGIDNR-----RVVVVAPQEGQVTRANTFKEKLSAYL-GENSVWG---------------EEIHKHLIGDVKGSLCILVDDLVDTGSTLSNAVKMLHAAGAGKITAYARKRAVTGAAAREAAAHHGRFSQGGDKIVEALDHLDFLVITNTLPHRDGSGAIVERKPGGKCRELTLAPLLAEAIYRIHKRIPFPELL 423
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: A0A4D9CT85_9STRA (Pribosyltran_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT85_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.510e-35
Identity = 93/228 (40.79%), Postives = 126/228 (55.26%), Query Frame = 1 
Query:    1 QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGGGAVAKRLSQARPEEPTRIV-VVAPQEGQVGRANAFKSRIEQYVETETTPIGLAFIARSSTKREDEEEEVHKHCIGDVKGALCIIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLP-HRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVH 678
            QGFF P  PVDHLTP   AAAY  E V +  K  A+         AG    +    L++A    P  +V VVAP EGQV RA  F+ R+ + +  + + + +A ++    K  D +  + +  IGDV G  CIIVDD++DTG TL   V LLKG GA ++  FATH RFS  G+ R  E   L  +V+ NT+P    ++  I+      KI +LSVAPL+AEAI  +H
Sbjct:  239 QGFFSPRVPVDHLTPAAAAAAYFVENVPD-FKRHALHP-------AGVSSSSRYTVLNRATSLGPCPMVTVVAPHEGQVRRARIFRERLSKLLGPQVS-VDMAMVS----KFRDADGRIFRQLIGDVTGRTCIIVDDLLDTGKTLATTVDLLKGEGADRVYGFATHARFSRDGQKRVQECENLQFVVVTNTMPLEGGKSRAIEIHPLHDKIHQLSVAPLIAEAILNIH 453
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: W7TQU0_9STRA (Ribose-phosphate pyrophosphokinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQU0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 7.270e-34
Identity = 94/231 (40.69%), Postives = 126/231 (54.55%), Query Frame = 1 
Query:    1 QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGGGAVAKR---LSQARPEEPTRIV-VVAPQEGQVGRANAFKSRIEQYVETETTPIGLAFIARSSTKREDEEEEVHKHCIGDVKGALCIIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLP-HRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVH 678
            QGFF P  PVDHLTP   AAAY  E V +  K  A+            G  + + R   L++A    P  IV VVAP EGQV RA  F+ R+ + +    + + +A ++    K  D +  + +  IGDV G  CIIVDD++DTG TL   V LLKG GA ++  FATH RFS  G+ R  E   L  +V+ NT+P    ++  I+      KI +LSVAPL+AEAI  +H
Sbjct:  291 QGFFSPRVPVDHLTPAAAAAAYFVENVPD-FKRHALHP---------AGESSSSSRYTVLNRATSLGPCPIVTVVAPHEGQVRRARIFRERLSKLLGPHVS-VDMAMVS----KFRDADGRIFRQLIGDVTGRTCIIVDDLLDTGKTLATTVDLLKGEGADRVYGFATHARFSRDGQKRVQECENLQFVVVTNTMPLEGGKSRAIEIHPLHDKIHQLSVAPLIAEAILNIH 506
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: A0A7S3XXR2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXR2_HETAK)

HSP 1 Score: 124 bits (310), Expect = 5.080e-29
Identity = 87/235 (37.02%), Postives = 119/235 (50.64%), Query Frame = 1 
Query:    4 GFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGGGAVAKRLSQARPEEPTRIVVVAPQEGQVGRANAFKSRI-----EQYVETETTPIG-----LAFIARSSTKREDEEEEVHKHCIGDVKGALCIIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVH 678
            GFF+   P D++ P GVAA Y  E +                 AAG  G AV              + VVA  E  + RA   +  +     E Y +   +  G     +A +++  T RED    VH+  IG+ KG +CIIVDD+ DTG TL  A +LLK  GA  +  F+THGRFSG G  R ++   LD LV  +T+P +   GE  D  +  KIR+LS+APL+AE I+R+H
Sbjct:  220 GFFRCKIPADNVEPWGVAAGYFAEQL-----------------AAGHEGRAVG-------------VTVVAAHENHMKRAKTLQGLLARRLAEHYPQWGQSGDGGPVVSVAAVSKMRT-REDHSRGVHRQLIGEAKGEICIIVDDLCDTGTTLVEAAQLLKEEGAVAVWGFSTHGRFSGDGARRVSQCQALDYLVCTDTIPFQRFLGE--DVLNSGKIRQLSIAPLIAEIIHRIH 421
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: K0RZ84_THAOC (Pribosyltran_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ84_THAOC)

HSP 1 Score: 122 bits (306), Expect = 6.420e-28
Identity = 83/245 (33.88%), Postives = 124/245 (50.61%), Query Frame = 1 
Query:    1 QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGGGAVAKRLSQARPEEPTRIVVVAPQEGQVGRANAFKSRIEQYVETETTPIGLAFIARSSTKREDEEEEVHKHCIGDVKGALCIIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCL---VICNTLPHRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVHKAMPFAELLTWNNPTS 726
            +GFF P+ PVDHL P  VAAAY      EEL                       KR          ++ +VA  E QV RAN F++ +++   +E   I +A I+ + T++ D    +    +GDVKG  CIIVDD+++TGGT+ NA++++  AGA+ + A+ATHG           +I  +DCL   +I N++ +  +  E        KIR+LS+APLLAE I R  +    + +L    P S
Sbjct:  379 KGFFSPSVPVDHLMPGPVAAAYF----YEELM----------------------KRRDDGAELPKPKLTIVAAHENQVFRANGFRNALQKLSGSEDNDIRVALISNTKTRKWDTSSSL----VGDVKGRTCIIVDDIINTGGTMRNAIQMVSDAGAQSVYAWATHGVLHLPENDAPEKIQAMDCLKYLLISNSVSNNRDMPE--------KIRKLSIAPLLAETIARKFQNGSVSSILQLRPPKS 585
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BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Match: A0A7S2USS9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USS9_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.270e-26
Identity = 68/182 (37.36%), Postives = 95/182 (52.20%), Query Frame = 1 
Query:  193 PTRIVVVAPQEGQVGRANAFKSRIEQYVETETTPIGLAFI-----------ARSSTKREDEEEEVHKHCIGDVKGALCIIVDDMVDTGGTLDNAVRLLKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEIKDRSSCTKIRELSVAPLLAEAIYRVHKAMPFAELL 705
            P R+V+VAP E  V RA  F+  +  ++       G+                +  K  D+  E+ +H IGDV GALCIIVDD++DTG T+  A  LLK   A K+ AFATHGRFSG           L+ +V  +T+P +         S   KI++LS+APL+AE I+R+H      +LL
Sbjct:   29 PQRVVIVAPHENNVLRAKHFQKTLINHLVMAALEEGVGLADGKPLAEPQIELATVVKMRDKRGELERHLIGDVDGALCIIVDDLLDTGVTVTEAADLLKSMNAGKVYAFATHGRFSGDCANTIVASKSLEWVVCTDTIPFQRFVSAAAMNSG--KIQQLSLAPLIAEVIHRLHAQRSMRDLL 208
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1400.2372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHL0_ECTSI1.960e-101100.00Ribose-phosphate pyrophosphokinase n=1 Tax=Ectocar... [more]
A0A6H5JRR1_9PHAE2.420e-8697.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHK9_ECTSI6.630e-7798.44Phosphoribosylpyrophosphate synthetase n=1 Tax=Ect... [more]
A0A6H5JA79_9PHAE2.950e-7495.31Pribosyltran_N domain-containing protein n=1 Tax=E... [more]
A0A835YZZ4_9STRA1.250e-5347.60Phosphoribosyltransferase-like protein n=1 Tax=Tri... [more]
A0A4D9CT85_9STRA2.510e-3540.79Pribosyltran_N domain-containing protein n=1 Tax=N... [more]
W7TQU0_9STRA7.270e-3440.69Ribose-phosphate pyrophosphokinase n=1 Tax=Nannoch... [more]
A0A7S3XXR2_HETAK5.080e-2937.02Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K0RZ84_THAOC6.420e-2833.88Pribosyltran_N domain-containing protein n=1 Tax=T... [more]
A0A7S2USS9_9STRA3.270e-2637.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1400contigE-siliculosus-1a_F_contig1400:97..4685 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size825
Model size825
Exons5
Ec32 orthologEc-24_004180.1
Ec32 ortholog descriptionRibose-phosphate diphosphokinase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
BiGG ReactioniRC1080.CRv4_Au5_s8_g15040_t1
COG Functional cat.EF
EC2.7.6.1
EggNOG OGsCOG0462@1,KOG1448@2759
EggNOG free text desc.ribose phosphate diphosphokinase activity
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
KEGG ModuleM00005
KEGG Pathwayko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ReactionR01049
KEGG TC2.A.17.3
KEGG koko:K00948,ko:K14638
KEGG rclassRC00002,RC00078
Seed eggNOG ortholog2880.D7FHL0
Seed ortholog evalue2.2e-79
Seed ortholog score302.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1400.2372.1prot_E-siliculosus-1a_F_contig1400.2372.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1400 97..4685 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927916.6261146-CDS-E-siliculosus-1a_F_contig1400:96..3271622927916.6261146-CDS-E-siliculosus-1a_F_contig1400:96..327Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 97..327 +
1696318735.684627-CDS-E-siliculosus-1a_F_contig1400:96..3271696318735.684627-CDS-E-siliculosus-1a_F_contig1400:96..327Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 97..327 +
1622927916.6400633-CDS-E-siliculosus-1a_F_contig1400:1290..14421622927916.6400633-CDS-E-siliculosus-1a_F_contig1400:1290..1442Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 1291..1442 +
1696318735.696559-CDS-E-siliculosus-1a_F_contig1400:1290..14421696318735.696559-CDS-E-siliculosus-1a_F_contig1400:1290..1442Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 1291..1442 +
1622927916.6531992-CDS-E-siliculosus-1a_F_contig1400:2603..28011622927916.6531992-CDS-E-siliculosus-1a_F_contig1400:2603..2801Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 2604..2801 +
1696318735.7050517-CDS-E-siliculosus-1a_F_contig1400:2603..28011696318735.7050517-CDS-E-siliculosus-1a_F_contig1400:2603..2801Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 2604..2801 +
1622927916.6670933-CDS-E-siliculosus-1a_F_contig1400:3791..39301622927916.6670933-CDS-E-siliculosus-1a_F_contig1400:3791..3930Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 3792..3930 +
1696318735.714916-CDS-E-siliculosus-1a_F_contig1400:3791..39301696318735.714916-CDS-E-siliculosus-1a_F_contig1400:3791..3930Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 3792..3930 +
1622927916.683373-CDS-E-siliculosus-1a_F_contig1400:4580..46851622927916.683373-CDS-E-siliculosus-1a_F_contig1400:4580..4685Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 4581..4685 +
1696318735.7244282-CDS-E-siliculosus-1a_F_contig1400:4580..46851696318735.7244282-CDS-E-siliculosus-1a_F_contig1400:4580..4685Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1400 4581..4685 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1400.2372.1

>prot_E-siliculosus-1a_F_contig1400.2372.1 ID=prot_E-siliculosus-1a_F_contig1400.2372.1|Name=mRNA_E-siliculosus-1a_F_contig1400.2372.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=275bp
QGFFKPTTPVDHLTPMGVAAAYLGELVTEELKAMAIEDREGKGGAAGTGG
GAVAKRLSQARPEEPTRIVVVAPQEGQVGRANAFKSRIEQYVETETTPIG
LAFIARSSTKREDEEEEVHKHCIGDVKGALCIIVDDMVDTGGTLDNAVRL
LKGAGARKILAFATHGRFSGGGEARCAEIPGLDCLVICNTLPHRTETGEI
KDRSSCTKIRELSVAPLLAEAIYRVHKAMPFAELLTWNNPTSKGLPPRTL
TRANLNDPSFAKGDGPRWPGGEPR*
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mRNA from alignment at E-siliculosus-1a_F_contig1400:97..4685+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1400.2372.1 ID=mRNA_E-siliculosus-1a_F_contig1400.2372.1|Name=mRNA_E-siliculosus-1a_F_contig1400.2372.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4589bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1400:97..4685+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAGGGATTTTTCAAGCCCACTACCCCAGTGGACCACTTAACGCCAATGGG
GGTTGCGGCGGCGTACCTCGGGGAGCTCGTGACGGAGGAGCTCAAGGCCA
TGGCCATCGAAGACCGGGAAGGGAAAGGAGGAGCGGCCGGGACGGGTGGC
GGTGCTGTGGCGAAACGATTAAGCCAGGCGAGGCCGGAGGAGCCGACTAG
GATCGTCGTCGTTGCTCCGCAGGAGGGCCAGGTAACCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCGGCGCCCCCCAGACCCCCCACAGCGANNN
NNNNNNNCACCTGACATCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCTA
GAGGGAGGGCCCCCCCCCCCCCCCCCCCCCCCCCCGTGGGATAGCCAGGA
GGAAGACCTATTTTGGGGCATAGGAAGCAGGCTGAAAAGGCGGGAAGTGA
TGTCGACAGGATAGATGGGGGCCAAACTAGGGGAAAAAATCGCTAGCTTT
GGCAAAGAAGGGAGGAACGATTGGCCATGGTGGATCCGTCCTGTGGGAAC
AATGCTCCGTCCTCTCTCGAGGACAGGGTGGTCAATGGTCTAACCGCTAA
GGCATGCAAATCGGTGCAGGGCATCCTGCTCTCTGCGTCGACCGCGCTTG
CGTGCTTTCGGATGGGGCGTTGTTACCGTTGAGCAGCAGGAGGGCTAGGC
GAGCCTGCCTACCCTCGCTTGTCGAGATGATACCGTGGGCCTCATCTAAA
CCAACGAACCGTGTGTTGTTGTCGTTACACAGCGGCAGGCCAGGTGATAC
TGCCAAGTTTCATCCATTGAGATGACATGACATGACACGATTGTGCCCCA
CCGAAATCGCCGACGCCAACACCAACAAGCACAAAAACAAAAGCGAGAAC
AGGTTGAAAAACAACACCAACGCCAACAACTCCCAACAGTATGAACAGTC
GCGACAATAGCGAGGACAGCAACAAGGAGATCAACAATTACAATAATAAC
GAGAACGAGAACGCGAACGAGAACAACAACGACAGCAGCAGACGAGAACG
AACGAGCTATAGCAACACACCAACAACCTCCAGCAGCATAAACAGGGGCA
ACAACAACTACAACAGCAGCAGCAGCAGTAGCAGCAACAACAATAACAAT
AAGACTTGTAATAATACAACACCAACAACAACAACGACGCGCAGGTGGGA
AGAGCGAACGCGTTCAAGAGCCGGATAGAGCAGTACGTGGAGACTGAGAC
TACCCCGATAGGGCTGGCGTTCATCGCCCGCAGCAGCACCAAGAGGGAGG
ACGAGGAAGAGGAGGTGCACAAGCACTGCATCGGGGATGTGAAAGGGTGA
GTTGAGACGCTCCGGAGGGGTTATCGCCGGCTTTCTTTCACTTAGATGTT
CTGGCCAAGGTGAGCACGACACGTATTTTGCTATTGCGGCCCCAAAACTG
AAAAATAATTAGTTAAAATAAACGTAGTACTCCTGAAACCTGAAAAATTA
GTTAAAATACACACACCCATAATTATATATTATCCATACGTACACACGCA
ATCGTCCGAGCATCTCGTACTGATTTGAATATATTGCTATTGCGTCCCCA
TAACTGAAAAAAAAAAGCACACCCAACCAGTTGTATGTGGCAGCTACCGC
GCGTCCCTCGTGCCTGTGTCCTCACACATGTGGGGAGAAGCTACCGCGCA
TACCTCGAACACGTGGCATACGGCACGAAAGAGGGCCTGCCTTTTTTATC
GCTCAGTAGGTGCCCTCGCGGTTGACGTACTTGATGTTGCTGGGGATGGT
GGAGGTGGTGGTGTATCTGTTTTTCGTTCCTTGTGGTTGCTAGTGTCGCC
GTTGTCGTAGATGCTGGTGCTGGTGTTGGAGCTTGTGCTGTTGTTTCCAA
TGCTGGTGGTGCTGGTGTTCGTGTTGTTGTTGGTGTATCTGCTGAAGACA
CCGACAAGGCATCATGCAAGGCTAGGATAGGGTAGGACGCGCCCTTGCAC
TGCCGAACGTATTGCTACCCCCATCCGTGTCGATCTATATATCGATAGGG
TAGGAAATACGATTTTGATCCACCTTTGACAACGTAGGAAGGAACGATTG
GCCCGGTCCCGTGGGAACAAGACTCCGAATCACTGGCAGAAAGCGTAGTC
AATGGCGTAGTAACCGCTAGGCATGCAAAACGTTAGTACGCCCCCCCCTC
CCTCCAACCCGAGTGCGGTAAAACCTAAGACGCGTTCCAATGGTTCCAAA
CATTCCAATAAACATTTTTGCCTTTTTACAATTCTATTTGATGTTTCCAA
GAACGAAATCGTCCTTCAGCTTCGTGAGTAAATCTTCCTTTTGGTTTTAT
ATATTTAATATTGACGTTATTTACTACGAAGTACCTCGTATGCTCATTCA
AAGCTTTTTAGGAGCTTGCTTAATGAAGCCACCTGATAACGTATGTTTCA
TCGTCGTCTCGAACATTGGCTTCCACTCCCGCCTCCCCCCCCCCCCCCTA
AAATCAGGGCTTTGTGCATAATCGTGGACGACATGGTTGACACGGGAGGG
ACCCTCGACAACGCCGTACGATTGCTGAAGGGGGCCGGAGCTAGGAAAAT
TCTGGCGTTCGCGACGCACGGCAGGTTCTCCGGCGGGGGAGAGGCGCGGT
GCGCCGAGATACCGGGCCTGGATTGCCTTGTCATCTGCAACACGCTGCCT
CATAGGTACGCGGCGCGAGAAGGGTGGCTAAAAGAAGCTGTTTGCGTGAT
TCCACCAGTCCACGAGACTTTCCAATCGACGTAAACAGACGCGACACCCT
GTGCTTAGGTACCTTGGCGTCTTGCCTCTCGGGATCTGATTGCCCGATAT
ATTGGTGGTTGTGATTCACATGGAAACTTGAAGGTTAAGCGGTGAACGAG
CCATCAATATGAATATGCACCGTCAAGTGTTAGACTAAGAAGAAGGTACT
GGGCAGAGAGAACGGAACGGTTTTTAATTTGAAGACAACAACGACAACAA
CAACAACAACCGCAACAACAGCAACAGCAACAGCTGCAACAACAACCCGA
GGTGTTTGTTGAGGAAATGGCTGATTTTCAGATGTTTTCGGTCTTGGCGC
GGTTCATGTTGGACAAAGTGTGTTTCTTGCTTGTAGTTTATCGCAATTTT
GTTTTGCTGTTTTTCTCGGTCTACGTCCCCTTTCATCGGTCGCAGTCAAG
CCATACTGCACCTGTCATGATTTCGGTCTACATCAGTGCGCTTCAAGACC
TTTGAGTCTGTGTCCCGAGTTTGTATTTGCTCAGGTTTGAAGGTTCAGTT
ACTATTGCCGGTCTCTGTTTTCTGCTCCGTTGATGGGTGTGCGGGAAATG
CGCCTTGCAAAGGGTGATTCTTCTCTGTTGGCTTGTGCATTCCCTAACAC
AGTCAGTGGTCGTCCTTCAAGCCGCTGCCGGCATAACCCGTGCTTGTTTT
GCAACGAGATTATTTGCTCATCTTTCAGCGTTTCCAAGCACACACGCCAT
ACGGCAAGGCACTGCTCTGTTCAACAAGCACAGGTTTGCCGAATTACAAG
CACTTCCAACAAAGTGCACTGTTAATCGGTCCAAACACCCCCGACACGCT
CACTGGCAACCCCAAGTGTTATTCGTGAAGCACATACCGACCTCACCCCT
TTTCCATCTGCGTACCCCCCCCCCACCGGCTCACCCGCCGCCCAGAACTG
AGACTGGAGAGATCAAAGACCGCTCTAGCTGCACCAAGATCAGAGAGCTC
AGCGTCGCCCCTCTGTTGGCAGAGGCCATCTACCGCGTCCACAAGGCCAT
GCCCTTTGCGGAACTCTTGACATGGAACAACCCGGTAAGCGAAGAAAATA
CATACGGTAGTTTTGTTTCCCGCGCTCAAGAAGAAGTCGTTGGAAGACTC
GTGAATACTACCCGGTATTTGTTTGTTTCAAGAATGAACAGTTGATTTGA
TTATCAAGGGTGAGATTATGTTTTTCATATCCCGGCCAACAGAGTCGATT
GTTTTCATGTTGATTTCGTCAAGTTTGATTCTTGGATCTTGATTGTCTGT
GTAATTGTGACCCAAACGGTCTACCTATTCACCTTTTGTTCCACTTTTTG
TGGTCTGAACAGAGGTCCCGCCTCTCCGTGTTCGCCCCCCCCCACACCCC
CGTCTCTTGCGCCCGGCCCACCGTTCGGGGGTCGTAAACGGCCTTCACCC
CCAACGGTCTACAACATCTGGCCGCTCCGAAACTTGCCGTCGGATGCGAT
GGCCGTTACGGTTTCATCCTGCACATGTCCTGTCTGTGTTGCGGCGTCTC
GAACGAACACATTGGGATGTCTCTGACGACCACATCATGGATGTCTGACG
AACACATGGTGGATGCTCTCTGACGAACACATCGTGGACGCTCTCTGTAA
ACGTTCTGCGTGGCCTGTATCATTCGCGTCGATGGGAAACCAATATTCCC
GTATGGTTTTTGCACGATTTTTCTTTTGGAAAAGACGTCCAAGGGCCTGC
CGCCGCGAACGTTGACGCGGGCCAACCTCAACGACCCGTCTTTTGCGAAG
GGCGATGGTCCCCGGTGGCCCGGGGGTGAACCTAGATGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1400:97..4685+

>mRNA_E-siliculosus-1a_F_contig1400.2372.1 ID=mRNA_E-siliculosus-1a_F_contig1400.2372.1|Name=mRNA_E-siliculosus-1a_F_contig1400.2372.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1650bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1400:97..4685+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAGGGATTTTTCAAGCCCACTACCCCAGTGGACCACTTAACGCCAATGGG
GGTTGCGGCGGCGTACCTCGGGGAGCTCGTGACGGAGGAGCTCAAGGCCA
TGGCCATCGAAGACCGGGAAGGGAAAGGAGGAGCGGCCGGGACGGGTGGC
GGTGCTGTGGCGAAACGATTAAGCCAGGCGAGGCCGGAGGAGCCGACTAG
GATCGTCGTCGTTGCTCCGCAGGAGGGCCAGCAGGGATTTTTCAAGCCCA
CTACCCCAGTGGACCACTTAACGCCAATGGGGGTTGCGGCGGCGTACCTC
GGGGAGCTCGTGACGGAGGAGCTCAAGGCCATGGCCATCGAAGACCGGGA
AGGGAAAGGAGGAGCGGCCGGGACGGGTGGCGGTGCTGTGGCGAAACGAT
TAAGCCAGGCGAGGCCGGAGGAGCCGACTAGGATCGTCGTCGTTGCTCCG
CAGGAGGGCCAGGTGGGAAGAGCGAACGCGTTCAAGAGCCGGATAGAGCA
GTACGTGGAGACTGAGACTACCCCGATAGGGCTGGCGTTCATCGCCCGCA
GCAGCACCAAGAGGGAGGACGAGGAAGAGGAGGTGCACAAGCACTGCATC
GGGGATGTGAAAGGGTGGGAAGAGCGAACGCGTTCAAGAGCCGGATAGAG
CAGTACGTGGAGACTGAGACTACCCCGATAGGGCTGGCGTTCATCGCCCG
CAGCAGCACCAAGAGGGAGGACGAGGAAGAGGAGGTGCACAAGCACTGCA
TCGGGGATGTGAAAGGGGCTTTGTGCATAATCGTGGACGACATGGTTGAC
ACGGGAGGGACCCTCGACAACGCCGTACGATTGCTGAAGGGGGCCGGAGC
TAGGAAAATTCTGGCGTTCGCGACGCACGGCAGGTTCTCCGGCGGGGGAG
AGGCGCGGTGCGCCGAGATACCGGGCCTGGATTGCCTTGTCATCTGCAAC
ACGCTGCCTCATAGGGCTTTGTGCATAATCGTGGACGACATGGTTGACAC
GGGAGGGACCCTCGACAACGCCGTACGATTGCTGAAGGGGGCCGGAGCTA
GGAAAATTCTGGCGTTCGCGACGCACGGCAGGTTCTCCGGCGGGGGAGAG
GCGCGGTGCGCCGAGATACCGGGCCTGGATTGCCTTGTCATCTGCAACAC
GCTGCCTCATAGAACTGAGACTGGAGAGATCAAAGACCGCTCTAGCTGCA
CCAAGATCAGAGAGCTCAGCGTCGCCCCTCTGTTGGCAGAGGCCATCTAC
CGCGTCCACAAGGCCATGCCCTTTGCGGAACTCTTGACATGGAACAACCC
GAACTGAGACTGGAGAGATCAAAGACCGCTCTAGCTGCACCAAGATCAGA
GAGCTCAGCGTCGCCCCTCTGTTGGCAGAGGCCATCTACCGCGTCCACAA
GGCCATGCCCTTTGCGGAACTCTTGACATGGAACAACCCGACGTCCAAGG
GCCTGCCGCCGCGAACGTTGACGCGGGCCAACCTCAACGACCCGTCTTTT
GCGAAGGGCGATGGTCCCCGGTGGCCCGGGGGTGAACCTAGATGAACGTC
CAAGGGCCTGCCGCCGCGAACGTTGACGCGGGCCAACCTCAACGACCCGT
CTTTTGCGAAGGGCGATGGTCCCCGGTGGCCCGGGGGTGAACCTAGATGA
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