prot_E-siliculosus-1a_F_contig140.2368.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig140.2368.1
Unique Nameprot_E-siliculosus-1a_F_contig140.2368.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length291
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig140.2368.1 vs. uniprot
Match: D7FX08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX08_ECTSI)

HSP 1 Score: 374 bits (959), Expect = 7.530e-128
Identity = 210/276 (76.09%), Postives = 215/276 (77.90%), Query Frame = 0
Query:    1 MGLDPFDTDTLVEWNERGTCDGSVGCEVNTGDTLTTSVGCGSADASSCLWAATSGTDGSSDCSCSVCGSANSFASSYMSEYPTWTRIACYIADMEAVGFDASVCVAAVVDDGAMACVGEPYDTPALGQLSCPSAGVMLTTSSNCDFDGSLREAAEMFGETIGTFAWPTDDSSGLSPSTVSTDDSVFPTAADDDDWPXXXXXXTYT--------------------DRGTTLTDDGDWAVPTEQTPGCMDKRDAASFCGPADAPSSSPVPTEESDSG 256
            MGLDPFDTDTLVEWNER TCDGSVGCEVNTGDTL T VGCGSADASSCLWAATSGTDGSSDCSCSVCGSANSFASSYMSEYPTWTRIACYIAD+EAVGFDASVCVAAVVDDGAMACV EPY+TPAL QLSCPSAG  LTTSSNCD DG+LREA EMFGETIGTFAWPTDDSSGLSPSTVSTDDSVFPTAADDDDWP  XXXX                       DRG  LTDD    V T  T               A+ PSSSPV  EE+DSG
Sbjct:    1 MGLDPFDTDTLVEWNERDTCDGSVGCEVNTGDTLATWVGCGSADASSCLWAATSGTDGSSDCSCSVCGSANSFASSYMSEYPTWTRIACYIADVEAVGFDASVCVAAVVDDGAMACVDEPYETPALEQLSCPSAGFTLTTSSNCDLDGTLREAGEMFGETIGTFAWPTDDSSGLSPSTVSTDDSVFPTAADDDDWPPSXXXXXXXXXXXXXXXXXXXXXXXSGTEDRGIILTDD----VSTPSTQ--------------AEPPSSSPVSPEEADSG 258          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2368.1 vs. uniprot
Match: D8LCT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT0_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 3.880e-78
Identity = 123/165 (74.55%), Postives = 134/165 (81.21%), Query Frame = 0
Query:    1 MGLDPFDTDTLVEWNERGTCDGSVGCEVNTGDTLTTSVGCGSADASSCLWAATSGTDGSSDCSCSVCGSANSFASSYMSEYPTWTRIACYIADMEAVGFDASVCVAAVVDDGAMACVGEPYDTPALGQLSCPSAGVMLTTSSNCDFDGSLREAAEMFGETIGTFA 165
            + LDPFDTD LVEW++R TCD S GCEVNTGDTL    GCGS DAS CLWAA+SG DGS DC+CSVCGS NS+ SSYMS+YPTWTRIACYIADMEA+GFDASVCVAAVVDDG MACV E Y+ P   Q SCPS  + L TSSNC+FDGSLREA EMF  TIGT A
Sbjct:   20 LALDPFDTDLLVEWDDRSTCDDSAGCEVNTGDTLARWTGCGSFDASRCLWAASSGEDGSDDCTCSVCGSVNSYGSSYMSDYPTWTRIACYIADMEAIGFDASVCVAAVVDDGVMACVDEAYEIPTFEQFSCPSTYLTLATSSNCEFDGSLREAEEMFA-TIGTSA 183          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2368.1 vs. uniprot
Match: D8LCL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL3_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 1.530e-68
Identity = 111/163 (68.10%), Postives = 129/163 (79.14%), Query Frame = 0
Query:    1 MGLDPFDTDTLVEWNERGTCDGSVGCEVNTGDTLTTSVGCGSADASSCLWAATSGTDGSSDCSCSVCGSANSFASSYMSEYPTWTRIACYIADMEAVGFDASVCVAAVVDDGAMACVGEPYDTPALGQLSCPSAGVMLTTSSNCDFDGSLREAAEMFGETIGT 163
            +GLDPFD D LVEW++RG CD    CEVN G+      GCGSADAS CLWAA SG +GS+DC+CSVCG+ ++ ASSYMS+YPTWTR+ACYIA MEA+G+DASVCVAAVVDDG MACV EPY+ P   QLSCP   ++LTTSS+C FDGSLREA EMF   IGT
Sbjct:   50 LGLDPFDADMLVEWDDRGKCDDGAACEVNAGNIEAAWAGCGSADASRCLWAAGSGEEGSTDCTCSVCGAPDTSASSYMSDYPTWTRVACYIAGMEAMGYDASVCVAAVVDDGVMACVDEPYEGPTFEQLSCPPTSLVLTTSSDCLFDGSLREAEEMFAS-IGT 211          
BLAST of mRNA_E-siliculosus-1a_F_contig140.2368.1 vs. uniprot
Match: A0A6H5JYT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT2_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 6.750e-68
Identity = 112/163 (68.71%), Postives = 127/163 (77.91%), Query Frame = 0
Query:    1 MGLDPFDTDTLVEWNERGTCDGSVGCEVNTGDTLTTSVGCGSADASSCLWAATSGTDGSSDCSCSVCGSANSFASSYMSEYPTWTRIACYIADMEAVGFDASVCVAAVVDDGAMACVGEPYDTPALGQLSCPSAGVMLTTSSNCDFDGSLREAAEMFGETIGT 163
            +GLDPFD D  VEW++RG C     CEVN  DT  T  GCGSADAS CLWAA SG +GSSDC+CSVCG+ ++ ASSYMS+YPTWTRI CYIADMEA+G+DASVCVAAVVDDG MACV EPY+ P   Q+SCP + + LTTSS C FDGSLREA EMF   IGT
Sbjct:   50 LGLDPFDADMPVEWDDRGKCTDGAACEVNAWDTEATWAGCGSADASRCLWAAGSGEEGSSDCTCSVCGAPDTSASSYMSDYPTWTRITCYIADMEAMGYDASVCVAAVVDDGVMACVDEPYEGPTFEQVSCPPSSLALTTSSECLFDGSLREAGEMFAS-IGT 211          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig140.2368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FX08_ECTSI7.530e-12876.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCT0_ECTSI3.880e-7874.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCL3_ECTSI1.530e-6868.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYT2_9PHAE6.750e-6868.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 267..284
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..266
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 285..290
NoneNo IPR availableTMHMMTMhelixcoord: 267..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig140contigE-siliculosus-1a_F_contig140:43557..47057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig140.2368.1mRNA_E-siliculosus-1a_F_contig140.2368.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig140 38340..48245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig140.2368.1 ID=prot_E-siliculosus-1a_F_contig140.2368.1|Name=mRNA_E-siliculosus-1a_F_contig140.2368.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=291bp
MGLDPFDTDTLVEWNERGTCDGSVGCEVNTGDTLTTSVGCGSADASSCLW
AATSGTDGSSDCSCSVCGSANSFASSYMSEYPTWTRIACYIADMEAVGFD
ASVCVAAVVDDGAMACVGEPYDTPALGQLSCPSAGVMLTTSSNCDFDGSL
REAAEMFGETIGTFAWPTDDSSGLSPSTVSTDDSVFPTAADDDDWPDDDD
WPTYTDRGTTLTDDGDWAVPTEQTPGCMDKRDAASFCGPADAPSSSPVPT
EESDSGDDGDKDVMTEVIISVVSTVVGGVILAIIKKKYFS*
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