prot_E-siliculosus-1a_F_contig13993.2352.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13993.2352.1
Unique Nameprot_E-siliculosus-1a_F_contig13993.2352.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length80
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13993.2352.1 vs. uniprot
Match: D8LGI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGI8_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 4.150e-39
Identity = 79/100 (79.00%), Postives = 80/100 (80.00%), Query Frame = 0
Query:    1 MDMQMSIQHDRIKSAKVEQLQKKKQKLEKDEEKFRGLANVAWMAFP--------------------ERKRNAQRKINEVDAELLALTNVNVHRSFAISDS 80
            MDMQMSIQHDRIKSAKVEQLQKKKQKLEKDEEKFRGLANVAWMAFP                    ERKRNAQRKINEVDAELLALTNVNVHR+FAISDS
Sbjct:   57 MDMQMSIQHDRIKSAKVEQLQKKKQKLEKDEEKFRGLANVAWMAFPVTAIVFVCTXXXXXLPELMKERKRNAQRKINEVDAELLALTNVNVHRNFAISDS 156          
BLAST of mRNA_E-siliculosus-1a_F_contig13993.2352.1 vs. uniprot
Match: A0A6H5JSH8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSH8_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 8.500e-35
Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 0
Query:    1 MDMQMSIQHDRIKSAKVEQLQKKKQKLEKDEEKFRGLANVAWMAFP-------ERKRNAQRKINEVDAELLALTNVNVHRSFAISDS 80
            MDMQMSIQHDRIKSAKVEQLQ+KK+KL+KDE+KFRGLANVAW+AFP       ER+RNAQRKINEVDAELL LTNVNVHRSFAISDS
Sbjct: 1650 MDMQMSIQHDRIKSAKVEQLQRKKEKLQKDEDKFRGLANVAWIAFPVTAIVAEERERNAQRKINEVDAELLTLTNVNVHRSFAISDS 1736          
BLAST of mRNA_E-siliculosus-1a_F_contig13993.2352.1 vs. uniprot
Match: D7FX07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX07_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.580e-28
Identity = 64/99 (64.65%), Postives = 72/99 (72.73%), Query Frame = 0
Query:    2 DMQMSIQHDRIKSAKVEQLQKKKQKLEKDEEKFRGLANVAWMAFP--------------------ERKRNAQRKINEVDAELLALTNVNVHRSFAISDS 80
            DM MS+ HDRIKS KVEQL+KK++KLEKDEEK+RGL N AW+AFP                    E+KRNAQRKIN VDAELLALTNVNV R+FAISDS
Sbjct:  142 DMHMSMHHDRIKSTKVEQLEKKRKKLEKDEEKYRGLVNAAWIAFPVTMVVYVLTCCSCCLPELMKEKKRNAQRKINVVDAELLALTNVNVRRNFAISDS 240          
BLAST of mRNA_E-siliculosus-1a_F_contig13993.2352.1 vs. uniprot
Match: A0A6H5KZI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI7_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.230e-23
Identity = 58/80 (72.50%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    1 MDMQMSIQHDRIKSAKVEQLQKKKQKLEKDEEKFRGLANVAWMAFPERKRNAQRKINEVDAELLALTNVNVHRSFAISDS 80
            MDMQMSIQHDRIKSAKVEQLQ+KK+KL +                 ER+RNAQRKINEVDAELLALTNVNVHRSFAISDS
Sbjct:   20 MDMQMSIQHDRIKSAKVEQLQRKKEKLAE-----------------ERERNAQRKINEVDAELLALTNVNVHRSFAISDS 82          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13993.2352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LGI8_ECTSI4.150e-3979.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSH8_9PHAE8.500e-3583.91Integrase catalytic domain-containing protein n=1 ... [more]
D7FX07_ECTSI1.580e-2864.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZI7_9PHAE1.230e-2372.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..40
NoneNo IPR availableCOILSCoilCoilcoord: 49..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13993contigE-siliculosus-1a_F_contig13993:226..1195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13993.2352.1mRNA_E-siliculosus-1a_F_contig13993.2352.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13993 226..1195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13993.2352.1 ID=prot_E-siliculosus-1a_F_contig13993.2352.1|Name=mRNA_E-siliculosus-1a_F_contig13993.2352.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=80bp
MDMQMSIQHDRIKSAKVEQLQKKKQKLEKDEEKFRGLANVAWMAFPERKR
NAQRKINEVDAELLALTNVNVHRSFAISDS
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