mRNA_E-siliculosus-1a_F_contig13817.2274.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig13817.2274.1
Unique NamemRNA_E-siliculosus-1a_F_contig13817.2274.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: A0A0D6E377_9GAMM (GTP cyclohydrolase FolE2 n=12 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D6E377_9GAMM)

HSP 1 Score: 410 bits (1053), Expect = 5.080e-143
Identity = 203/218 (93.12%), Postives = 214/218 (98.17%), Query Frame = 1
Query:    1 LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVWNW 654
            L AF+ SQ+GLSQHAYL++EGELPLKR+ALISPLAGWKSYPF+LRCQL+PAGFQAEL LTVGYSSTCPCSAALARQLIQQAFEEDF+EIPLTK+AV+AWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGV+GFQLKVVHAESLHAHDAVARS WNW
Sbjct:   83 LNAFLTSQDGLSQHAYLSIEGELPLKRQALISPLAGWKSYPFTLRCQLTPAGFQAELDLTVGYSSTCPCSAALARQLIQQAFEEDFAEIPLTKTAVSAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVSGFQLKVVHAESLHAHDAVARSEWNW 300          
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: A0A651D2M8_HALSX (GTP cyclohydrolase FolE2 n=2 Tax=root TaxID=1 RepID=A0A651D2M8_HALSX)

HSP 1 Score: 383 bits (984), Expect = 1.410e-132
Identity = 196/218 (89.91%), Postives = 202/218 (92.66%), Query Frame = 1
Query:    1 LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVWNW 654
            LK FIASQEGLSQHAYL VEGELPLKREALISPLAGWKSYPFSLRCQL+PAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRS VEC+LRL+E +N E P    IE SIDRIE+ LGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDK LRQ P V+GFQLKVVHAESLHAHDAVARS WNW
Sbjct:   83 LKTFIASQEGLSQHAYLTVEGELPLKREALISPLAGWKSYPFSLRCQLTPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSFVECTLRLAEDDNAELP----IERSIDRIEQTLGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKTLRQLPDVSGFQLKVVHAESLHAHDAVARSEWNW 296          
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: UPI00110E34F7 (GTP cyclohydrolase FolE2 n=1 Tax=Halomonas sp. ATBC28 TaxID=2545264 RepID=UPI00110E34F7)

HSP 1 Score: 382 bits (981), Expect = 4.640e-132
Identity = 193/218 (88.53%), Postives = 206/218 (94.50%), Query Frame = 1
Query:    1 LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVWNW 654
            L+AF+ SQEGLS+ A+LNVEGELPLKREALISPLAGWKSYPF+LRCQL+P GFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRS VECSLRL++ EN E P+AD +E+SIDRIE ALGTALQTAVKRIDEQAFALANGQNLMFCEDAARR+DKALRQAP VTGFQLKVVHAESLHAH+AVA S WNW
Sbjct:   83 LRAFLTSQEGLSKQAHLNVEGELPLKREALISPLAGWKSYPFTLRCQLTPDGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSFVECSLRLAKGENDELPIADWLESSIDRIEAALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRVDKALRQAPEVTGFQLKVVHAESLHAHNAVACSEWNW 300          
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: A0A265E283_9GAMM (GTP cyclohydrolase FolE2 n=6 Tax=Halomonas TaxID=2745 RepID=A0A265E283_9GAMM)

HSP 1 Score: 380 bits (975), Expect = 3.800e-131
Identity = 191/218 (87.61%), Postives = 202/218 (92.66%), Query Frame = 1
Query:    1 LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVWNW 654
            L  F+ SQEGLSQ AYL VEGELPLKR+ALISPLAGWKSYPFSLR QL+PAGFQ ELGLTVGYSSTCPCSAALARQ IQQAFEEDFSEIPLT SAV+AWLGSEEGILATPHSQRSSVECSLRL+E EN E P+AD +E ++DRIE+ALGTALQTAVKRIDEQAFALANGQNLMFCEDAARR+DKALRQAPGV GFQLKVVHAESLHAHDAVARS WNW
Sbjct:   83 LSTFLTSQEGLSQQAYLTVEGELPLKRQALISPLAGWKSYPFSLRGQLTPAGFQIELGLTVGYSSTCPCSAALARQSIQQAFEEDFSEIPLTPSAVSAWLGSEEGILATPHSQRSSVECSLRLTEGENEELPIADWLERAVDRIEKALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRVDKALRQAPGVAGFQLKVVHAESLHAHDAVARSEWNW 300          
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: A0A246S1I7_9GAMM (GTP cyclohydrolase FolE2 n=2 Tax=Halomonas TaxID=2745 RepID=A0A246S1I7_9GAMM)

HSP 1 Score: 374 bits (960), Expect = 6.350e-129
Identity = 191/218 (87.61%), Postives = 203/218 (93.12%), Query Frame = 1
Query:    1 LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVWNW 654
            L AF+ASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPF+LRCQL+P GFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLT+SAV+AWLGSEEGILATPHSQRS +EC+LRL+E ++GE P    IE  IDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARR+DKALRQA  VTGFQLKVVHAESLHAH+AVA S WNW
Sbjct:   83 LSAFLASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFTLRCQLTPEGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTQSAVSAWLGSEEGILATPHSQRSFLECTLRLAEDDHGELP----IERLIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRVDKALRQASEVTGFQLKVVHAESLHAHNAVACSEWNW 296          
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: UPI0006D9E415 (GTP cyclohydrolase FolE2 n=1 Tax=Halomonas sp. HL-93 TaxID=1666906 RepID=UPI0006D9E415)

HSP 1 Score: 373 bits (958), Expect = 1.280e-128
Identity = 190/218 (87.16%), Postives = 203/218 (93.12%), Query Frame = 1
Query:    1 LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVWNW 654
            LK FIASQEGLSQHAYL+VEGEL LKREALISPLAGWKSYPF+LRCQL+P GFQAELGLTVGYSSTCPCSAALARQL+QQAFEEDFSEIPLT+SAV+AWLGSEEGILATPHSQRSSVEC LRL+E++N E P    IE  ID IE+ALGTALQTAVKRIDEQAFALANGQNLMFCEDAARR+DKALRQ+PGVTGFQLKVVHAESLHAH+AVA S WNW
Sbjct:   83 LKTFIASQEGLSQHAYLSVEGELLLKREALISPLAGWKSYPFTLRCQLTPEGFQAELGLTVGYSSTCPCSAALARQLVQQAFEEDFSEIPLTQSAVSAWLGSEEGILATPHSQRSSVECRLRLAEADNDELP----IEGLIDHIEKALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRVDKALRQSPGVTGFQLKVVHAESLHAHNAVACSEWNW 296          
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: A0A7Z0LXK5_9GAMM (GTP cyclohydrolase FolE2 n=1 Tax=Halomonas glaciei TaxID=186761 RepID=A0A7Z0LXK5_9GAMM)

HSP 1 Score: 350 bits (899), Expect = 1.390e-119
Identity = 172/218 (78.90%), Postives = 194/218 (88.99%), Query Frame = 1
Query:    1 LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVWNW 654
            L  F+AS E LSQHAYL  +GELPLKREALISPLAGWKSYPF+L CQ++PAGFQA++ L +GYSSTCPCSAALARQLIQQAF+EDF+EIPLTK+AV++WLGSEEGILATPHSQRS V C+LRL+E ++    + + +  SIDRIE+ LGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDK LRQAPGVT F+LKVVHAESLHAHDAVARS WNW
Sbjct:   83 LNTFLASHEELSQHAYLTFKGELPLKREALISPLAGWKSYPFTLHCQVTPAGFQADIDLEIGYSSTCPCSAALARQLIQQAFDEDFAEIPLTKAAVSSWLGSEEGILATPHSQRSFVYCTLRLAEEDDNTLQIDELVARSIDRIEKTLGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKTLRQAPGVTAFKLKVVHAESLHAHDAVARSEWNW 300          
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: A0A3T1DZY2_9GAMM (Uncharacterized protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DZY2_9GAMM)

HSP 1 Score: 335 bits (860), Expect = 2.900e-115
Identity = 172/200 (86.00%), Postives = 182/200 (91.00%), Query Frame = 1
Query:   55 VEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVWNW 654
            +EGELPLKREALISPL GWKSYPF+LRCQL+P G QAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLT+SAV+AWLGSEEGILATPHSQRS VEC+LRL+E E         IE  IDRIE+ALGTALQTAVKRIDEQAFALANGQNLMFCEDAARR+DKALRQAPGVTGFQLKVVHAESLHAH+AVA S WNW
Sbjct:    1 MEGELPLKREALISPLTGWKSYPFTLRCQLTPEGLQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTQSAVSAWLGSEEGILATPHSQRSFVECTLRLAEDEL-------PIERLIDRIEKALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRVDKALRQAPGVTGFQLKVVHAESLHAHNAVACSEWNW 193          
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: A0A1R4I4C3_9GAMM (GTP cyclohydrolase FolE2 n=3 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1R4I4C3_9GAMM)

HSP 1 Score: 338 bits (866), Expect = 1.270e-114
Identity = 170/218 (77.98%), Postives = 185/218 (84.86%), Query Frame = 1
Query:    1 LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVWNW 654
            L AF+  Q GLSQHAYL+VEG +PLKR ALISPLAGWK+YPFSL CQL+PAGFQA+L + +GYSSTCPCSAALARQLIQQAFEEDF EIPLT+SAV AWLGSEEGILATPHSQRS V CSLRLS       PL    E +IDR+E ALGTALQTAVKRIDEQAFALANGQNLMFCEDAA+R+D  LR+ P V GFQLKVVHAESLHAH+AVARS W W
Sbjct:   83 LNAFVKGQGGLSQHAYLSVEGNMPLKRSALISPLAGWKNYPFSLHCQLTPAGFQAQLDIKIGYSSTCPCSAALARQLIQQAFEEDFEEIPLTRSAVLAWLGSEEGILATPHSQRSDVTCSLRLSPESGDTLPL----EATIDRVENALGTALQTAVKRIDEQAFALANGQNLMFCEDAAKRVDSTLRKMPWVAGFQLKVVHAESLHAHNAVARSEWQW 296          
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Match: A0A6H1Y4H7_9GAMM (GTP cyclohydrolase FolE2 n=4 Tax=Halomonadaceae TaxID=28256 RepID=A0A6H1Y4H7_9GAMM)

HSP 1 Score: 332 bits (852), Expect = 1.950e-112
Identity = 167/216 (77.31%), Postives = 188/216 (87.04%), Query Frame = 1
Query:    1 LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSPAGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWLGSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVVHAESLHAHDAVARSVW 648
            L+ F+ASQEGLSQHAYL++ GELPL+R ALISPL+GWK YPF+LRC+LSP GFQ+ L L VGYSSTCPCSAALARQLIQQAFEEDF +IPL+KSAV AWLGSEEGILATPHSQRS    + RL+ +++    +   +EN IDR+ERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLD  LRQAPGV+GF+LKVVHAESLHAHDAVA S W
Sbjct:   83 LERFLASQEGLSQHAYLSIAGELPLERAALISPLSGWKYYPFTLRCELSPDGFQSALDLEVGYSSTCPCSAALARQLIQQAFEEDFEDIPLSKSAVLAWLGSEEGILATPHSQRSVAHLTFRLATTDDAAISIETFMENMIDRVERALGTALQTAVKRIDEQAFALANGQNLMFCEDAARRLDTTLRQAPGVSGFRLKVVHAESLHAHDAVAYSEW 298          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13817.2274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D6E377_9GAMM5.080e-14393.12GTP cyclohydrolase FolE2 n=12 Tax=Halomonadaceae T... [more]
A0A651D2M8_HALSX1.410e-13289.91GTP cyclohydrolase FolE2 n=2 Tax=root TaxID=1 RepI... [more]
UPI00110E34F74.640e-13288.53GTP cyclohydrolase FolE2 n=1 Tax=Halomonas sp. ATB... [more]
A0A265E283_9GAMM3.800e-13187.61GTP cyclohydrolase FolE2 n=6 Tax=Halomonas TaxID=2... [more]
A0A246S1I7_9GAMM6.350e-12987.61GTP cyclohydrolase FolE2 n=2 Tax=Halomonas TaxID=2... [more]
UPI0006D9E4151.280e-12887.16GTP cyclohydrolase FolE2 n=1 Tax=Halomonas sp. HL-... [more]
A0A7Z0LXK5_9GAMM1.390e-11978.90GTP cyclohydrolase FolE2 n=1 Tax=Halomonas glaciei... [more]
A0A3T1DZY2_9GAMM2.900e-11586.00Uncharacterized protein n=1 Tax=Halomonas olivaria... [more]
A0A1R4I4C3_9GAMM1.270e-11477.98GTP cyclohydrolase FolE2 n=3 Tax=unclassified Halo... [more]
A0A6H1Y4H7_9GAMM1.950e-11277.31GTP cyclohydrolase FolE2 n=4 Tax=Halomonadaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13817contigE-siliculosus-1a_F_contig13817:574..1230 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size657
Model size657
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.S
EC3.5.4.16
EggNOG OGs1MV1B@1224,1RNDY@1236,1XJCU@135619,COG1469@1,COG1469@2
EggNOG free text desc.Converts GTP to 7,8-dihydroneopterin triphosphate
KEGG ModuleM00126
KEGG Pathwayko00790,ko01100,map00790,map01100
KEGG ReactionR00428,R04639,R05046,R05048
KEGG koko:K09007
KEGG rclassRC00263,RC00294,RC00323,RC00945,RC01188
Preferred namefolE2
Seed eggNOG ortholog1415755.JQLV01000001_gene3422
Seed ortholog evalue5.4e-113
Seed ortholog score413.7
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927895.4122763-CDS-E-siliculosus-1a_F_contig13817:573..12301622927895.4122763-CDS-E-siliculosus-1a_F_contig13817:573..1230Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13817 574..1230 -
1696318727.3204908-CDS-E-siliculosus-1a_F_contig13817:573..12301696318727.3204908-CDS-E-siliculosus-1a_F_contig13817:573..1230Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13817 574..1230 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13817.2274.1prot_E-siliculosus-1a_F_contig13817.2274.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig13817 574..1230 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig13817.2274.1

>prot_E-siliculosus-1a_F_contig13817.2274.1 ID=prot_E-siliculosus-1a_F_contig13817.2274.1|Name=mRNA_E-siliculosus-1a_F_contig13817.2274.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=219bp
LKAFIASQEGLSQHAYLNVEGELPLKREALISPLAGWKSYPFSLRCQLSP
AGFQAELGLTVGYSSTCPCSAALARQLIQQAFEEDFSEIPLTKSAVAAWL
GSEEGILATPHSQRSSVECSLRLSESENGEWPLADSIENSIDRIERALGT
ALQTAVKRIDEQAFALANGQNLMFCEDAARRLDKALRQAPGVTGFQLKVV
HAESLHAHDAVARSVWNW*
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mRNA from alignment at E-siliculosus-1a_F_contig13817:574..1230-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig13817.2274.1 ID=mRNA_E-siliculosus-1a_F_contig13817.2274.1|Name=mRNA_E-siliculosus-1a_F_contig13817.2274.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=657bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13817:574..1230- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTAAAAGCTTTTATCGCCAGTCAAGAAGGTCTTTCCCAGCATGCGTACTT GAACGTCGAGGGCGAGCTGCCGCTCAAGCGGGAAGCCTTGATTAGTCCGC TTGCTGGATGGAAAAGCTACCCCTTTTCACTGCGCTGCCAATTAAGCCCC GCTGGCTTTCAGGCGGAACTAGGGCTGACGGTGGGCTATTCCTCCACATG CCCCTGCTCGGCGGCCCTGGCACGGCAGTTGATTCAACAGGCTTTTGAAG AGGATTTTTCGGAAATTCCGTTAACCAAATCGGCAGTGGCTGCGTGGTTG GGCAGCGAAGAAGGGATACTTGCAACGCCCCATAGTCAGCGCAGCAGTGT CGAATGCAGTTTACGTTTATCTGAAAGCGAAAACGGAGAATGGCCCCTCG CGGACTCGATAGAAAACTCGATTGACCGTATCGAACGAGCGCTCGGTACC GCGCTACAAACCGCAGTGAAACGTATCGATGAACAGGCCTTTGCCCTCGC CAACGGACAAAACCTGATGTTCTGTGAAGACGCGGCAAGGCGGCTGGATA AAGCACTACGGCAAGCGCCGGGAGTAACAGGCTTTCAGCTTAAGGTCGTG CATGCGGAAAGCCTCCACGCCCACGATGCCGTGGCGCGCAGCGTGTGGAA TTGGTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13817:574..1230-

>mRNA_E-siliculosus-1a_F_contig13817.2274.1 ID=mRNA_E-siliculosus-1a_F_contig13817.2274.1|Name=mRNA_E-siliculosus-1a_F_contig13817.2274.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1314bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13817:574..1230- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTAAAAGCTTTTATCGCCAGTCAAGAAGGTCTTTCCCAGCATGCGTACTT
GAACGTCGAGGGCGAGCTGCCGCTCAAGCGGGAAGCCTTGATTAGTCCGC
TTGCTGGATGGAAAAGCTACCCCTTTTCACTGCGCTGCCAATTAAGCCCC
GCTGGCTTTCAGGCGGAACTAGGGCTGACGGTGGGCTATTCCTCCACATG
CCCCTGCTCGGCGGCCCTGGCACGGCAGTTGATTCAACAGGCTTTTGAAG
AGGATTTTTCGGAAATTCCGTTAACCAAATCGGCAGTGGCTGCGTGGTTG
GGCAGCGAAGAAGGGATACTTGCAACGCCCCATAGTCAGCGCAGCAGTGT
CGAATGCAGTTTACGTTTATCTGAAAGCGAAAACGGAGAATGGCCCCTCG
CGGACTCGATAGAAAACTCGATTGACCGTATCGAACGAGCGCTCGGTACC
GCGCTACAAACCGCAGTGAAACGTATCGATGAACAGGCCTTTGCCCTCGC
CAACGGACAAAACCTGATGTTCTGTGAAGACGCGGCAAGGCGGCTGGATA
AAGCACTACGGCAAGCGCCGGGAGTAACAGGCTTTCAGCTTAAGGTCGTG
CATGCGGAAAGCCTCCACGCCCACGATGCCGTGGCGCGCAGCGTGTGGAA
TTGGTGATTAAAAGCTTTTATCGCCAGTCAAGAAGGTCTTTCCCAGCATG
CGTACTTGAACGTCGAGGGCGAGCTGCCGCTCAAGCGGGAAGCCTTGATT
AGTCCGCTTGCTGGATGGAAAAGCTACCCCTTTTCACTGCGCTGCCAATT
AAGCCCCGCTGGCTTTCAGGCGGAACTAGGGCTGACGGTGGGCTATTCCT
CCACATGCCCCTGCTCGGCGGCCCTGGCACGGCAGTTGATTCAACAGGCT
TTTGAAGAGGATTTTTCGGAAATTCCGTTAACCAAATCGGCAGTGGCTGC
GTGGTTGGGCAGCGAAGAAGGGATACTTGCAACGCCCCATAGTCAGCGCA
GCAGTGTCGAATGCAGTTTACGTTTATCTGAAAGCGAAAACGGAGAATGG
CCCCTCGCGGACTCGATAGAAAACTCGATTGACCGTATCGAACGAGCGCT
CGGTACCGCGCTACAAACCGCAGTGAAACGTATCGATGAACAGGCCTTTG
CCCTCGCCAACGGACAAAACCTGATGTTCTGTGAAGACGCGGCAAGGCGG
CTGGATAAAGCACTACGGCAAGCGCCGGGAGTAACAGGCTTTCAGCTTAA
GGTCGTGCATGCGGAAAGCCTCCACGCCCACGATGCCGTGGCGCGCAGCG
TGTGGAATTGGTGA
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