mRNA_E-siliculosus-1a_F_contig1379.2255.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: D7FK14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK14_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 7.670e-138 Identity = 204/208 (98.08%), Postives = 206/208 (99.04%), Query Frame = 2
Query: 476 MQPVNELPRKVGGFFAVIARKGGERELEASPVAESTNKYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTRTEMTT 1099
MQPVNELPRKVGGFFAVIARKGGERELEASP AEST KYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPKDEYGY+YPCVKARGIIEGSAA+VMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTRTEMTT
Sbjct: 1 MQPVNELPRKVGGFFAVIARKGGERELEASPEAESTTKYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPKDEYGYKYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTRTEMTT 208
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: A0A835Z8H4_9STRA (START domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H4_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.240e-53 Identity = 94/171 (54.97%), Postives = 120/171 (70.18%), Query Frame = 2
Query: 587 KYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTRTEMTT 1099
+Y EL+ A+ AE + PGW EV + GVTVWKK+ PK YG QYPCVKA ++E +A + +I+DS+RVLEYNRYS+GR D+ LGPHTKIVWN+ QPPL+ K+HDFCTLMH+ D G + TRAT+H +AP L G VRSEI+LGVT++ P P R +TT
Sbjct: 1 RYFDELEAARRMAEAIMPDPGWVEVHQKDGVTVWKKWLPKGVYGSQYPCVKATAVVEVNAEAFVDLILDSSRVLEYNRYSRGRDDVARLGPHTKIVWNRTQPPLTGKVHDFCTLMHVDRRDG--GGATVTTRATDHERAPRLRGAVRSEIVLGVTVVEPLA--PGRATVTT 167
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: A0A4D9DEU8_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEU8_9STRA) HSP 1 Score: 190 bits (483), Expect = 5.210e-49 Identity = 88/205 (42.93%), Postives = 132/205 (64.39%), Query Frame = 2
Query: 587 KYLAELQLAQESAERALGTPG--WEEVAHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNVELA 1195
+YL+ L+ +E +ALG G W V+ + +W++ +D YG +YPC+K ++ S VM ++VDS RV EYN+YSKGR D+ +GPHTKIVWN+ PPL KK H+FCT+MH+ D GS +++T+ T+HP+ P RSEI+LGVT +RP DP R +TT++H+ S G+P IA++ S + +DF +++ A
Sbjct: 203 RYLSLLRSLEEEGHQALGDEGGGWHPVSEKEDTKIWRRNLAEDAYGREYPCLKLSTMLHASPEAVMDLLVDSERVGEYNKYSKGRDDVARVGPHTKIVWNRTLPPLQKKAHEFCTIMHVVRRPD--GSQVMLTKFTDHPEVPRSSRFARSEIILGVTEVRPHPTDPNRAHLTTISHVKSAGIPPFIAEKFSVRGVVDFAESLRKA 405
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: A0A7S2DLP4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLP4_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.550e-39 Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 2
Query: 701 PKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 1186
PKD YG + VK+R ++ S D+ MI DS+R EYN+YS GRTD LG TKIVWN+ PP +K+ HDFCTLMH + + G+ +L+T ATEHPK ++RSEILLGV ++ P +TE+T +NH+ + GVP +A+RVS +AIDF++ V
Sbjct: 3 PKDTYGSENSFVKSRSLVSASPGDIFDMIYDSSRTKEYNKYSVGRTDAVELGKTTKIVWNRTAPPGTKRPHDFCTLMHGETFTN--GTQLLMTCATEHPKVKPSKEYLRSEILLGVNLMVPISEG--QTELTCINHVKTKGVPTFLAERVSAGSAIDFVRQV 160
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: A0A7S2Y106_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y106_9STRA) HSP 1 Score: 157 bits (396), Expect = 3.710e-38 Identity = 74/179 (41.34%), Postives = 110/179 (61.45%), Query Frame = 2
Query: 578 STNKYLAELQLAQESAERALG---------TPGWEEVAHR-GGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTR 1084
S+N +E Q+ +E L + W+ V + G VWK Y PKD G YP +K+ GI+ AAD++ M++DS RV EYNR+SKGRTD++ +G TK+VWN+ PP++ K HDFCTLMH+ + ++GS+ ++T+A +HPK P G +RS I+ G +P GDP++
Sbjct: 191 SSNTAASETQILKEQTNELLQGYSEYLLNPSYNWKLVIEKEDGTKVWKAYAPKDADGADYPIIKSHGIVNAPAADLVEMMIDSERVQEYNRFSKGRTDVQTMGEDTKVVWNRTWPPMTPKPHDFCTLMHVTK-NPKDGSYAMLTKAIQHPKVPKTKGFIRSRIVCGAMFFKPVPGDPSK 368
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: A0A7S2EST7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EST7_TRICV) HSP 1 Score: 123 bits (309), Expect = 6.150e-27 Identity = 75/207 (36.23%), Postives = 107/207 (51.69%), Query Frame = 2
Query: 671 GGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDI------------EHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDD------------EEGSFMLITRATEHPKAP-------LLDGH----VRSEILLGVTILRPAKGDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 1186
G + VW F D YG + P VK +++ S +++DS+RV YN+ S GR D+ E+ KIV N QPPLSK+ +F TLMH + LDD +E F++++RA K P + DGH +RSEILLGV ++RP G P + E+T V H S VP M+A +V K A+ F+++V
Sbjct: 131 GDILVWTGKFRSDGYGSELPLVKTTWLLDMSPRSFAELLMDSSRVRSYNKMSLGRADLICFQLGIDTIKGEYGNGEAKIVRNLTQPPLSKRRMEFITLMHARRLDDADAVNSGMMGGDKENGFVVVSRAIGGNKIPNKEVGNKMDDGHDESYIRSEILLGVNLIRPIPGHPQKAEVTAVTHCNSPSVPTMLAGKVGVKGAVGFVKDV 337
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: A0A7R9VKG4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKG4_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.390e-25 Identity = 74/188 (39.36%), Postives = 108/188 (57.45%), Query Frame = 2
Query: 662 AHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDI-------EHLGPH----TKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRA-TEHPKAPLLDGHV-RSEILLGVTILRPAKGDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 1186
A V VW F YG P V+A G+I + ++ M++DS+RV EYN+ S GR D+ E+ GP TK+V + ++PPL +K +F TLMH + L+D G +++++RA T+ +A DG V RSEIL+GV + R +GD R M TVNHI S VP+MIA ++ A F ++
Sbjct: 85 ADENEVLVWSGNFTHGLYGSDLPTVRAEGVINMAPIKIVEMLMDSSRVHEYNKMSLGRDDVLVLQDDLENDGPFGQSITKVVRSASKPPLVRKPIEFVTLMHARKLEDGNG-YLIVSRAVTQAEEAINSDGKVMRSEILMGVNVFRNVEGDENRCVMITVNHIRSPMVPMMIAKKIGLSAATGFFNDL 271
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: A0A7S1VKR8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKR8_9STRA) HSP 1 Score: 115 bits (289), Expect = 6.540e-25 Identity = 65/178 (36.52%), Postives = 103/178 (57.87%), Query Frame = 2
Query: 677 VTVWKKYFPKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDI----EHLGPH------TKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHV-RSEILLGVTILRPAKGDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFI 1177
V VW F YG P ++A G++ S ++ M++DSTRV EYN S GR D+ E + P TKIV ++ QPP+ +K F T++H + L ++ G ++LI+RA H +LD ++ RSEIL+G+ ++R +G+P ++ M VNHI S +P +A ++ A +FI
Sbjct: 86 VLVWSGNFMHGYYGSDLPAIRAAGLVNMSPGALVDMLMDSTRVKEYNTMSLGRKDMLVLQEDMDPDGPFRGITKIVQSETQPPMIRKTVQFTTILHARKLPND-GGYLLISRAVHHGAPSILDSNIIRSEILMGLNVIRSIEGEPNQSFMINVNHIRSPLIPFFVAKKLGLSAASNFI 262
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: A0A6U6KS53_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KS53_9STRA) HSP 1 Score: 117 bits (292), Expect = 7.010e-24 Identity = 70/188 (37.23%), Postives = 111/188 (59.04%), Query Frame = 2
Query: 662 AHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDI-------EHLGPH----TKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRA-TEHPKAPLLDGHV-RSEILLGVTILRPAKGDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 1186
A V VW F YG P V+A G++ + + ++ +++D++RV EYN+ S GR D+ E+ GP TK+V + ++PPL +K +F TLMH++ L+D G +++++RA T+ +A DG V RSEIL+GV I+R +GD R M VNHI S +P+MIA ++ A+ F ++
Sbjct: 279 ADENDVLVWSGNFTHGLYGSDLPTVRAEGVVNMAPSALVDLLLDNSRVYEYNKMSLGRDDVLVLQDDLENDGPFGQSITKVVRSASKPPLVRKSLEFVTLMHVRKLEDGNG-YLIVSRAVTQAEEAINSDGKVMRSEILMGVNIIRNVEGDDNRAIMINVNHIRSPMIPMMIAKKIGLSAAVGFFTDL 465
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Match: A0A7S2K4D5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4D5_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.930e-23 Identity = 79/254 (31.10%), Postives = 126/254 (49.61%), Query Frame = 2
Query: 521 AVIARKG------GERELEASPVAESTNKYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAADVMSMIVDSTRVLEYNRYSKGRTDI-----------EHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGS---FMLITRAT---------EHPKAP---LLDGHVRSEILLGVTILRPAKGDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 1186
A +AR G G + + P + T K+ +++ + ALG EE+ VW F YG+ P VK R I+ S +++DS +V YN+ S GRTD+ E K+V N +PPL+K+ +F TLMH + L+ + G +++++RA E+P +RSEILLGV +LR +G+P +T++T+V H+ S VP + A +V K A+DFI+++
Sbjct: 9 ADLARSGFEVANDGPQSPKWKPSTKFTEKFFSDVSNKGKDIIDALG----EEIL------VWFAKFDDHCYGHALPLVKTRAIVNMSPKAFAELLMDSKKVKLYNKMSLGRTDVKVFQAGVDAVGEFGDGEAKVVQNLTKPPLTKRTLEFVTLMHARKLNPDHGEGEGYLVVSRAVNDRLERDAAENPTTASDVTTMERLRSEILLGVNVLRAIEGEPNKTDLTSVTHVNSPLVPALAAKKVGLKGAVDFIRDI 252 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1379.2255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1379.2255.1 >prot_E-siliculosus-1a_F_contig1379.2255.1 ID=prot_E-siliculosus-1a_F_contig1379.2255.1|Name=mRNA_E-siliculosus-1a_F_contig1379.2255.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=439bp MQLRILLGLIGQLVAIPAALFLVPTTLPKLPPTATTAGVDSSASAVEDELback to top mRNA from alignment at E-siliculosus-1a_F_contig1379:14554..24978- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1379.2255.1 ID=mRNA_E-siliculosus-1a_F_contig1379.2255.1|Name=mRNA_E-siliculosus-1a_F_contig1379.2255.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10425bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1379:14554..24978- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1379:14554..24978- >mRNA_E-siliculosus-1a_F_contig1379.2255.1 ID=mRNA_E-siliculosus-1a_F_contig1379.2255.1|Name=mRNA_E-siliculosus-1a_F_contig1379.2255.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2634bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1379:14554..24978- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |