mRNA_E-siliculosus-1a_F_contig1373.2235.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: A0A6H5KW74_9PHAE (Ribokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KW74_9PHAE) HSP 1 Score: 667 bits (1722), Expect = 5.800e-239 Identity = 355/375 (94.67%), Postives = 357/375 (95.20%), Query Frame = 2
Query: 20 MYPSRLVVVAATVLLQAGDGAFAFIARSSVAGAAGQLALKKVPLIRSPVPTMSGGDQHAEVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLCKGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLVSSTSEGCQRFPADKVNATDTVGAGDAFLGSLGAYLARGMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDLHLP 1144
MYPSRLV AA VLLQAGDGAFAFIARSS A AAGQ ALKKVPLIRSPV TMSGGDQH EVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEA XXXXX IVIVPGANYLLSPEDVA ATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSD+LCPNETELALLCKGDIDPEDDESV+AGARELLARGAKNVVVTLGSNGCMLVSSTSEG QRFPADKV ATDTVGAGDAFLGSLGAYLARGMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDLHLP
Sbjct: 1 MYPSRLVAAAAIVLLQAGDGAFAFIARSSAAAAAGQPALKKVPLIRSPVSTMSGGDQHTEVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEADGSEGXXXXXNFIVIVPGANYLLSPEDVATATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDILCPNETELALLCKGDIDPEDDESVIAGARELLARGAKNVVVTLGSNGCMLVSSTSEGYQRFPADKVIATDTVGAGDAFLGSLGAYLARGMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDLHLP 375
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: A0A835YZQ8_9STRA (Ribokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ8_9STRA) HSP 1 Score: 270 bits (691), Expect = 2.080e-83 Identity = 169/338 (50.00%), Postives = 204/338 (60.36%), Query Frame = 2
Query: 185 DQHAEVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDA-GAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLC-KGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLV----------------SSTSEGCQRFPADK-VNATDTVGAGDAFLGSLGAYLARGMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDLHL 1141
D EV+VVGSCN+DL T+ RLP GETITG+ FE+ GGKG+NQAV A R+G VAMVA +G D +G + V++L +G+D V R A G TGVAQ+CV+ A IVIVPGAN +++P DVAAA AK+ +CQ E+ +ATLAAL RGR G TIFNPAPA A L LE SD++CPNETEL LLC G D E V AR +L RGA +VV TLG G +LV S + FPA A DT GAGDAF+G+L A LARG +L A AVRVASV+V GAQ SYP+ LP +L L
Sbjct: 4 DCAVEVVVVGSCNSDLTTFAERLPRPGETITGTGFESAFGGKGSNQAVCAARLGARVAMVAKVGGDKHGDEQVENLASNGVDTSQVTRAARGVPTGVAQVCVDTA-------TGQNTIVIVPGANGVVAPADVAAADALFAGAKVTVCQLEIPQDATLAALRRGREHGHVTIFNPAPAPAALLPGILEASDIVCPNETELELLCGDGGADCSTLEGVERAARAMLERGAGSVVATLGERGALLVPGRFGGKSGSSGDGSDDSAQRAVRHFPAPAGAKAVDTTGAGDAFVGALAAQLARGRSLSAAAAAAVRVASVSVGARGAQASYPRAAGLPAELRL 334
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: A0A142XB83_9BACT (Ribokinase n=2 Tax=Gemmata TaxID=113 RepID=A0A142XB83_9BACT) HSP 1 Score: 246 bits (629), Expect = 1.300e-74 Identity = 146/313 (46.65%), Postives = 186/313 (59.42%), Query Frame = 2
Query: 197 EVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLCKGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLVSSTSEGCQRFPADKVNATDTVGAGDAFLGSLGAYLARGMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDL 1135
++ VVGS N DL TYT+RLP GET+ RF GGKGANQAVMA R+G V +VA +G+D +G D + L +GID V G TG A I V++AG I + PGAN LL+P DV A ++ A++++CQ EV E LAA+ AG+ +FNPAPA +P LS V CPNE E A+L + E E A AREL+ARGA NVVVTLG+ GC++ +T G PA V A DT GAGDAF+GSL +LARG L A +A R+A+++V G Q S+P DLP DL
Sbjct: 5 KICVVGSANLDLNTYTTRLPVPGETLHAHRFTMGYGGKGANQAVMAARLGADVVLVARVGNDLFGRDMLAHLRTEGIDTRRVTSTDGVPTGTAVITVDDAGRNT--------IAVTPGANGLLAPTDVDATRGAIESARVLVCQQEVPVETNLAAMRFAAGAGVPVVFNPAPASTTIPAEAYRLSTVFCPNEHEAAVLTGKPV--ESPEEAEAAARELMARGAHNVVVTLGARGCLV--ATPRGMTALPAPAVEAVDTTGAGDAFIGSLAFFLARGDDLVTAAQRANRIAAISVQSPGTQTSFPHAADLPADL 305
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: A0A6P4Y2K3_BRABE (Ribokinase n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y2K3_BRABE) HSP 1 Score: 245 bits (626), Expect = 4.000e-74 Identity = 140/315 (44.44%), Postives = 195/315 (61.90%), Query Frame = 2
Query: 197 EVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLCKGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLVSSTSEGCQRFPADKVNATDTVGAGDAFLGSLGAYLA--RGMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDL 1135
+V+VVGSCN DL++Y SRLP GETI G++F GGKGANQ VMA R+G AMVA +GDD +G++++++ D+G++ +V A+TGVA I V E G I+IV GAN L+ DV + + AK+++CQ E++PE +L AL G+ G+TTI NPAPA+A L +LSD+ CPNETE +L + ++ A LL +G + V++TLG GC+ SS SE PA KV+ DT GAGDAF+GSL Y+A + + LE+ I KA ++S++V G Q S+P DLP DL
Sbjct: 5 DVVVVGSCNMDLISYVSRLPKPGETIHGNKFSLGFGGKGANQCVMAARLGAATAMVAKVGDDVFGSNFIQNFKDNGVNVDNVEVTKEASTGVAPIAVNEDGQNS--------IIIVSGANLKLTAADVKEHESVITQAKVLICQLEIQPETSLEALRIGKQHGVTTILNPAPAEASLDPELYKLSDIFCPNETEAEILTGLPVTTAEEAEKAADV--LLDKGCEKVIITLGEKGCLCKSSVSEKGIHVPARKVSPVDTTGAGDAFVGSLAYYMACHKDLRLEEVIQKACHISSISVCSPGTQTSFPYRKDLPKDL 309
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: A0A7V9ELF4_9ACTN (Ribokinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9ELF4_9ACTN) HSP 1 Score: 244 bits (624), Expect = 7.460e-74 Identity = 140/313 (44.73%), Postives = 194/313 (61.98%), Query Frame = 2
Query: 188 QHAEVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLCKGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLVSSTSEGCQRFPADKVNATDTVGAGDAFLGSLGAYLARGMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLP 1126
Q + VVG+ N DL++Y SRLP GET+ G RF+ GGKGANQAVMA R+G V+MVA LGDD +G + + + GI+ V A +GVA I V++ G I+IV GAN LL D+ A + ++ A++++CQ E+ + TLAAL R G+TTIFNPAPA++ L +LSD+ CPNE+E +LC + DD AR +L +GA +V++TLG GC++V T EG + P D+V A DT GAGDAFLG L ++LARG L ++ +A +VA+++V G Q S+P GDLP
Sbjct: 3 QEPTICVVGAANMDLISYVSRLPRMGETLHGYRFQMGFGGKGANQAVMAARLGARVSMVAKLGDDVFGERTLDNFKEQGINTTYVSFAQEAFSGVAPIAVDDQGNNS--------IIIVTGANDLLGASDIEKADSAIRTAQVVVCQLEIEIDTTLAALRLARRHGVTTIFNPAPARSSLEPELYKLSDIFCPNESEAEMLCGQTVASIDDAE--KAARTMLKKGAGSVILTLGERGCLVV--TPEGAEHVPVDRVTAVDTTGAGDAFLGGLASFLARGEGLVESAKRANQVAAISVQGRGTQTSFPSAGDLP 303
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: A0A538DKJ7_9ACTN (Ribokinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DKJ7_9ACTN) HSP 1 Score: 243 bits (620), Expect = 4.010e-73 Identity = 150/320 (46.88%), Postives = 196/320 (61.25%), Query Frame = 2
Query: 185 DQHAEVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLCKGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLVSSTSEGCQRF-PADKVNATDTVGAGDAFLGSLGAYLARGMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDLHL 1141
++ +V VVGS N DL+TY RLP GET+ G RFE GGKGANQAVMA ++G V MV LGDD +G DY+++ G+D V A A+TGVA I VE+A I++V GAN LL+P DVAAA + + +++CQ E +AA++ R AG+TTIFNPAPA+ LP+ L D LCPNE+E L + DD AR L RG ++V+VTLG G +LV EG + PA KV A DT GAGDAF+GS +LARG D++ +A RVAS++V GAQPS+P+ +LPP+L L
Sbjct: 11 ERRVKVCVVGSSNVDLVTYAERLPVLGETLPGERFEQSFGGKGANQAVMAAKLGAEVTMVTKLGDDIFGRDYLENFRRLGLDTRHVLVTADASTGVAPIWVEQASGNNQ-------IIVVLGANELLTPADVAAAADAIGRCAVLICQWECPLPTMIAAMQIARDAGVTTIFNPAPARGALPEDLYALCDFLCPNESETESLTGIAVATIDDAE--RAARLLRDRGPRSVLVTLGERGSLLVD---EGPRTLVPAPKVRAIDTTGAGDAFVGSFAFFLARGHDARDSMARAARVASISVQHRGAQPSFPRADELPPELLL 318
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: U3K8E6_FICAL (Ribokinase n=6 Tax=Passeriformes TaxID=9126 RepID=U3K8E6_FICAL) HSP 1 Score: 242 bits (617), Expect = 8.490e-73 Identity = 145/316 (45.89%), Postives = 195/316 (61.71%), Query Frame = 2
Query: 194 AEVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLCKGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLVSSTSEGCQRFPADKVNATDTVGAGDAFLGSLGAYLAR--GMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDL 1135
AEV+VVGSC TDL++ T+RLP GETI G +F GGKGANQ V + R+G +++ +G+DS+G DYV +L + I V + A AATG A I V G IVIVPGAN LL+ ED+ A++ + AK+++CQ E+ P +L AL+ RA+G+ T+FNPAPA ADL ++ SD+ C NETE +L + +D V R LL RG K V+VTLG+ GCM++S + PA KV A DT GAGD+F+G+L YLA +++E+ I K+ VASV+V G Q SYP DLP DL
Sbjct: 3 AEVVVVGSCMTDLVSLTTRLPKAGETILGHKFFVGFGGKGANQCVQSARLGAKTSLICKVGNDSFGNDYVDNLKKNSISTAFVGQTADAATGTASIIVNSEGQNV--------IVIVPGANLLLNFEDLKRASDVICKAKVVVCQLEITPAVSLEALKMARASGVKTLFNPAPALADLDPQFYTYSDIFCCNETEAEILTGIPVGNLEDAEKVG--RMLLERGCKLVIVTLGAEGCMMISGDEPIPKHVPAGKVRAVDTTGAGDSFVGALAFYLAYYPKLSMEEMIRKSNCVASVSVQAPGTQSSYPYRKDLPQDL 308
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: A0A6J0IUS6_9PASS (Ribokinase n=65 Tax=Aves TaxID=8782 RepID=A0A6J0IUS6_9PASS) HSP 1 Score: 240 bits (612), Expect = 4.720e-72 Identity = 142/316 (44.94%), Postives = 196/316 (62.03%), Query Frame = 2
Query: 194 AEVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLCKGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLVSSTSEGCQRFPADKVNATDTVGAGDAFLGSLGAYLAR--GMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDL 1135
A+V+VVGSC TDL++ T+RLP GET+ G +F GGKGANQ V + R+G +++ +G DS+G DYV++L +GI V + AATG A I V G IVIVPGAN LL+ ED+ A++ + AK+++CQ E+ P +L AL+ RA+G+ T+FNPAPA ADL ++ SD+ C NETE +L + +D V R LL RG K V+VTLG+ GCM++S + PA KV A DT GAGD+F+G+L YLA +++E+ I K+ +ASV+V +G Q SYP DLP DL
Sbjct: 3 AQVVVVGSCMTDLVSLTTRLPKAGETVLGHKFFIGFGGKGANQCVQSARLGANTSLICKVGKDSFGNDYVENLKKNGISTAFVDQTTDAATGTASIIVNSEGQNV--------IVIVPGANLLLNFEDLKRASDVICKAKVLVCQLEITPAVSLEALKMARASGVKTLFNPAPALADLDPQFYIYSDIFCCNETEAEILTGIPVGNLEDAEKVG--RMLLERGCKLVIVTLGAEGCMMISVEEPIPKHVPAGKVRAVDTTGAGDSFVGALAFYLAYYPKLSMEEMIRKSNCIASVSVQASGTQSSYPYRKDLPQDL 308
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: UPI0001CBC386 (ribokinase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC386) HSP 1 Score: 240 bits (612), Expect = 5.500e-72 Identity = 140/323 (43.34%), Postives = 196/323 (60.68%), Query Frame = 2
Query: 173 MSGGDQHAEVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLCKGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLVSSTSEGCQRFPADKVNATDTVGAGDAFLGSLGAYLAR--GMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDL 1135
M+ D + +VGSCNTDL++Y RLP GETI G++F GGKGANQ VMA R+GV VAMV+ +GDDS+G D +K+ + ++ V AATGVA I V G IVIV GAN L++ +D +A +++ D K+++CQ E+ P +LAA++ + G+ TIFNPAPA +L ++ + +D+ CPNETE LL + + A A LL +G VV+TLG+ G ++V+S + P +KV A DT GAGDAF+GSL YLA + LE+ I +A +ASV+V AG Q S+P DLP +L
Sbjct: 1 MAAVDNAVNIAIVGSCNTDLISYVPRLPKPGETIHGTKFSVGFGGKGANQCVMAARLGVKVAMVSKVGDDSFGHDTIKNFQTNNVNTNHVSMTKEAATGVAPITVNTEGQNS--------IVIVSGANMLITEDDAKSALSQMPDLKVVICQLEISPHTSLAAMKYAKEKGILTIFNPAPAIPELDSQFYKYADIFCPNETETELLTGLPVTNITEAEKAALA--LLDKGCSKVVITLGTQGSVVVTSETRKAIHIPTNKVKAIDTTGAGDAFIGSLAYYLAHYPALPLEECIKRASHIASVSVCGAGTQTSFPWKKDLPSEL 313
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Match: A0A226P0N6_COLVI (Ribokinase n=25 Tax=Neognathae TaxID=8825 RepID=A0A226P0N6_COLVI) HSP 1 Score: 239 bits (610), Expect = 9.360e-72 Identity = 141/316 (44.62%), Postives = 194/316 (61.39%), Query Frame = 2
Query: 194 AEVIVVGSCNTDLMTYTSRLPSRGETITGSRFETHNGGKGANQAVMARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEAGXXXXXXXXXXXIVIVPGANYLLSPEDVAAATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDRYLELSDVLCPNETELALLCKGDIDPEDDESVVAGARELLARGAKNVVVTLGSNGCMLVSSTSEGCQRFPADKVNATDTVGAGDAFLGSLGAYLAR--GMALEDAIGKAVRVASVTVTRAGAQPSYPQGGDLPPDL 1135
A+V VVGSC TDL+++T+RLP GETI G +F GGKGANQ V + R+G +++ +G DS+G DYV +L +G+ V + A A TG A I V G IVIVPGAN LL+ ED+ A++ + AK+ +CQ E+ P +L AL+ RA+G+ T+FNPAPA ADL ++ SD+ C NETE +L + +D V R LL RG K V+VTLG+ GCM++S + PA+KV A DT GAGD+F+G+L YLA + +E+ + K+ +ASV+V +G Q SYP DLP DL
Sbjct: 3 ADVAVVGSCMTDLVSFTTRLPRAGETILGQKFFIGFGGKGANQCVQSARLGAKTSLICKVGKDSFGNDYVANLKKNGVSTAFVGQTADAVTGTASIIVNSEGQNV--------IVIVPGANLLLNSEDLKRASDIICKAKVAVCQLEITPAVSLEALKMARASGVKTLFNPAPALADLDPQFYTHSDIFCCNETEAEILTGIPVGNLEDAEKVG--RMLLGRGCKLVIVTLGAEGCMMISVEEPIPKHVPAEKVRAVDTTGAGDSFVGALAFYLAYYPDLPVEEMVRKSNYIASVSVQASGTQSSYPYRKDLPQDL 308 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1373.2235.1 >prot_E-siliculosus-1a_F_contig1373.2235.1 ID=prot_E-siliculosus-1a_F_contig1373.2235.1|Name=mRNA_E-siliculosus-1a_F_contig1373.2235.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=377bp MYPSRLVVVAATVLLQAGDGAFAFIARSSVAGAAGQLALKKVPLIRSPVPback to top mRNA from alignment at E-siliculosus-1a_F_contig1373:22837..27611- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1373.2235.1 ID=mRNA_E-siliculosus-1a_F_contig1373.2235.1|Name=mRNA_E-siliculosus-1a_F_contig1373.2235.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4775bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1373:22837..27611- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1373:22837..27611- >mRNA_E-siliculosus-1a_F_contig1373.2235.1 ID=mRNA_E-siliculosus-1a_F_contig1373.2235.1|Name=mRNA_E-siliculosus-1a_F_contig1373.2235.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2262bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1373:22837..27611- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |