mRNA_E-siliculosus-1a_F_contig137.2209.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 237 bits (604), Expect = 8.610e-66 Identity = 119/154 (77.27%), Postives = 131/154 (85.06%), Query Frame = 2
Query: 59 EGRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKLRTSSRVPVVRALRLTWALSMEDLLRKAAVELWTSSQRLELRGSSCASSLGSEAAWPQGLTHLVLHTDSYIPTDNVW 520
E RTRC DAFV+ALSQAC+GG+KRWYAST+ELQLT LD+CRACR++SILHV V+DQTP SLWSSRT QTRPN RS L SSRVPVVRALRLTWALSME LLRKAA+ELWT S+RLEL GSSC SSLGSE WP+GLT LVL+TDS I VW
Sbjct: 6 EWRTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGTVW 159
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 196 bits (498), Expect = 7.780e-56 Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 2
Query: 50 MATEGRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKLRTSSRVPVVRALRLTWALSMEDLLRKAAVELWTSSQRLELRGSSCASSLGSEAAWPQGLTHLVLHTDSYIPTD 511
M TEG TR FDAF +ALSQAC+GG+KRWY ST ELQL LD+CRACRS+ LHVRV TP SLWS T Q PN +SSK+R SRVPVVRALRLTWA SME L+++AA+ELW+ S+RLE+ G CA+SLGS WP GLT LVL TD +IP +
Sbjct: 1 MPTEGYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGS-VVWPLGLTQLVLDTDFHIPME 153
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 130 bits (327), Expect = 1.160e-30 Identity = 74/155 (47.74%), Postives = 100/155 (64.52%), Query Frame = 2
Query: 56 TEGRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKLRTSSRVPVVRALRLTWALSMEDLLRKAAVELWTSSQRLELRGSSCASSLGSEAAWPQGLTHLVLHTDSYIPTDNVW 520
TEG D +VAL+QAC G +KRWY ST+ELQL L++C ACRS+ +LHV V + TP +LWSSRT++T P+ RS ++ TS+RVP V+AL TWAL M+ L ++AA E ++R G S A+S+ S WP+ L LV +P VW
Sbjct: 83 TEGGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVES-VVWPESLKRLVF--SRRMPGKAVW 234
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 136 bits (342), Expect = 8.780e-30 Identity = 77/153 (50.33%), Postives = 96/153 (62.75%), Query Frame = 2
Query: 50 MATEGRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKLRTSSRVPVVRALRLTWALSMEDLLRKAAVELWTSSQRLELRGSSCASSLGSEAAWPQGLTHLVLHTDSYIPT 508
M T+G ++C DAFVVAL+QAC G +KRWY ST+ELQL L++C ACR LHVRV QTP SLW T N RS K+ SSRVPVV+A LTWAL M L +++A E+ + S S A+SL S A WPQ L +V +D + T
Sbjct: 1 MTTKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLES-AVWPQRLKRMVFESDMTVNT 152
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.900e-29 Identity = 74/151 (49.01%), Postives = 97/151 (64.24%), Query Frame = 2
Query: 50 MATEGRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKLRTSSRVPVVRALRLTWALSMEDLLRKAAVELWTSSQRLELRGSSCASSLGSEAAWPQGLTHLVLHTDSYI 502
M +E + RC DAFVVALSQ +GG+KRWY ST++LQL L+ C ACRS+ +LHV V+ +TP +LWS Q P A TS+RVP V+A+ LTWA E L A+ ELWT + L+L+ S C ++L S WPQGL LV+ +I
Sbjct: 1 MTSEAQRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS--LGQANPTAG-----TSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDS-VVWPQGLQRLVMDCTVFI 143
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 129 bits (323), Expect = 6.380e-28 Identity = 81/175 (46.29%), Postives = 97/175 (55.43%), Query Frame = 2
Query: 50 MATEGRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKLRT----------------------------SSRVPVVRALRLTWALSMEDLLRKAAVELWTSSQRLELRGSSCASSLGSEAAWPQGLTHLVLHT 490
M +EG +R FDA ++A+SQA +G KRWY ST+EL+L L+ CRACR +HVRV+ TP SLWS TR + RSSK R SSRVPV +AL LTWAL E LL+ AVELWT + L+LR S S L S AWPQ L L L T
Sbjct: 1 MDSEGASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVS-VAWPQNLKRLALET 174
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 125 bits (314), Expect = 1.630e-27 Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 2
Query: 62 GRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKLRTSSRVPVVRALRLTWALSMEDLLRKAAVELWTSSQRLELRGSSCASSLGSEAAWPQGLTHLVLHTD 493
GR+ C AF+VAL+Q C G +KRWYAST+ELQL L+ C ACR LHVRV+ QTP SLWS + RS + S+RVP V+A LTWAL ME LL+ +AVEL + S+ + G+S +SLGS L LV +D
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSD 156
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 109 bits (273), Expect = 5.580e-25 Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 2
Query: 62 GRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKLRTSSRVPVV 319
G T+CFDAFVVALSQAC+GG KR Y ST+EL L LD+CRA RS+S LHVRV QTP S WS Q RP+ SSK+R SSRVPVV
Sbjct: 18 GPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSKIRLSSRVPVV 103
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 115 bits (287), Expect = 3.250e-23 Identity = 67/144 (46.53%), Postives = 87/144 (60.42%), Query Frame = 2
Query: 62 GRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKLRTSSRVPVVRALRLTWALSMEDLLRKAAVELWTSSQRLELRGSSCASSLGSEAAWPQGLTHLVLHTD 493
GR+ C DAF+VAL QA G KRWY ST+ELQL L+ C ACRS+ V+++ QTPHSLWS R + RS + SRVP V+A WAL ME LL ++A EL S+ + G S A+S G W Q LT L+ +++
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPG-RMGWFQKLTRLMFYSE 167
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 9.990e-19 Identity = 45/76 (59.21%), Postives = 55/76 (72.37%), Query Frame = 2
Query: 65 RTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSILHVRVNDQTPHSLWSSRTTQTRPNARSSKL 292
R++C DAFVVAL+Q C G +KRWYAST+ELQL L+ C ACR LHVRV+ +TP SLWS RTT + RS K+
Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRSRKV 113 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig137.2209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig137.2209.1 >prot_E-siliculosus-1a_F_contig137.2209.1 ID=prot_E-siliculosus-1a_F_contig137.2209.1|Name=mRNA_E-siliculosus-1a_F_contig137.2209.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=504bp MATEGRTRCFDAFVVALSQACKGGKKRWYASTMELQLTWLDMCRACRSSSback to top mRNA from alignment at E-siliculosus-1a_F_contig137:20929..28097+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig137.2209.1 ID=mRNA_E-siliculosus-1a_F_contig137.2209.1|Name=mRNA_E-siliculosus-1a_F_contig137.2209.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7169bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig137:20929..28097+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig137:20929..28097+ >mRNA_E-siliculosus-1a_F_contig137.2209.1 ID=mRNA_E-siliculosus-1a_F_contig137.2209.1|Name=mRNA_E-siliculosus-1a_F_contig137.2209.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3024bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig137:20929..28097+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |