mRNA_E-siliculosus-1a_F_contig1369.2199.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1369.2199.1
Unique NamemRNA_E-siliculosus-1a_F_contig1369.2199.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: A0A6H5L450_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L450_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 1.000e-92
Identity = 148/158 (93.67%), Postives = 149/158 (94.30%), Query Frame = 3 
Query:  255 DVRTAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERDDLLMKMLGLPPSSV 728
            DVRTAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGK+SKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLIS         DLVKEYTKERDDLLMKMLGLPPSSV
Sbjct:    3 DVRTAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKSSKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLIS---------DLVKEYTKERDDLLMKMLGLPPSSV 151
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BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: D7FXG6_ECTSI (CBS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG6_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 1.390e-68
Identity = 118/125 (94.40%), Postives = 118/125 (94.40%), Query Frame = 3 
Query:  354 MSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERDDLLMKMLGLPPSSV 728
            MSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVK       DLVKEYTKERDDLLMKMLGLPPSSV
Sbjct:    1 MSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVK-------DLVKEYTKERDDLLMKMLGLPPSSV 118
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BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: A0A835ZG49_9STRA (CBS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG49_9STRA)

HSP 1 Score: 193 bits (491), Expect = 5.260e-55
Identity = 94/152 (61.84%), Postives = 117/152 (76.97%), Query Frame = 3 
Query:  255 DVRTAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERDDLLMKMLG 710
            +VRTAQHAWEKSCY+NIDY ID+ S VYDA+ RM+A+NVGCL+VT+     G+I+ERDYVCK+ALLG+ S++T +KE+ T     V   RSD+I+ CVKKMI ADVRHLPV+ DD  E+ GLISVK       DLVKEYTKE+D+LL K+ G
Sbjct:   43 EVRTAQHAWEKSCYYNIDYMIDQESKVYDAVQRMAAFNVGCLVVTEQSKPVGVITERDYVCKVALLGRNSRETFIKEVATA--LKVVVRRSDSIDTCVKKMITADVRHLPVLSDDNDEIIGLISVK-------DLVKEYTKEKDELLTKLFG 185
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BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: A0A7S1XTH5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTH5_9STRA)

HSP 1 Score: 172 bits (435), Expect = 6.360e-47
Identity = 78/147 (53.06%), Postives = 111/147 (75.51%), Query Frame = 3 
Query:  264 TAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERDDLLMKM 704
            TA  AWEKSCYF ID+KI + ++VY+A+ + +AYN+GCL+V K   V+GIISERDYV KIALLG+ S DT V E+CT G  MV A  +D+++ C+ KM+A D+RHLPV++++TG+V G++SVK       DL+KE  KE+D+++ K+
Sbjct:   34 TASTAWEKSCYFKIDFKISQDASVYEAVQKFAAYNIGCLVVMKGDEVAGIISERDYVTKIALLGRKSVDTKVSEVCTSGANMVVARTTDSVQECMGKMLARDIRHLPVVEEETGQVVGMLSVK-------DLIKELVKEKDEIITKL 173
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: A0A7S1U998_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U998_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.080e-45
Identity = 78/147 (53.06%), Postives = 111/147 (75.51%), Query Frame = 3 
Query:  264 TAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERDDLLMKM 704
            TA  AWEKSCYF ID+KI + ++VY+A+ + +AYN+GCL+V K   V+GIISERDYV KIALLG+ S DT V E+CT G  MV A  +D+++ C+ KM+A D+RHLPV++++TG+V G++SVK       DL+KE  KE+D+++ K+
Sbjct:  130 TASTAWEKSCYFKIDFKISQDASVYEAVQKFAAYNIGCLVVMKGDEVAGIISERDYVTKIALLGRKSVDTKVSEVCTSGANMVVARTTDSVQECMGKMLARDIRHLPVVEEETGQVVGMLSVK-------DLIKELVKEKDEIITKL 269
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BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: A0A7R9UAT3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAT3_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.980e-43
Identity = 80/148 (54.05%), Postives = 110/148 (74.32%), Query Frame = 3 
Query:  264 TAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIV-TKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERDDLLMKM 704
            TA +AWEKSCYF ID+KIDE ++VY+A+ R +AYN+GCL+V +K G V+GIISERDYV K+ALLG+ S D  V EICT    MV A  SD+++ C+  M+A D+RHLPV+ +D G+V G++SVK       DL+KE  KE+D+++ K+
Sbjct:   72 TASNAWEKSCYFKIDFKIDEDASVYEAVQRFAAYNIGCLVVVSKEGKVAGIISERDYVTKVALLGRKSVDVKVSEICTSEANMVVANTSDSVQDCMGMMLARDIRHLPVVGED-GDVVGMLSVK-------DLIKELVKEKDEMISKL 211
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: A0A835YGF7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGF7_9STRA)

HSP 1 Score: 162 bits (410), Expect = 5.150e-43
Identity = 78/152 (51.32%), Postives = 113/152 (74.34%), Query Frame = 3 
Query:  252 DDVRTAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVT-KNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERDDLLMKM 704
            +++ +A+ A EKSCYF ID+KIDE +TVY+A+ R +AYN+G L VT K G V GIISERDYVCKIALLG+ S+ T VKE+ T G  ++ A +SD++  C++KM+A D+RHLPV+D+++G V G++S+K       DL+KE   E++ L+ K+
Sbjct:   52 NELSSARSALEKSCYFKIDFKIDEDATVYEAVQRFAAYNIGALAVTDKGGKVVGIISERDYVCKIALLGRQSQTTKVKEVATMGANIIVAKKSDSLHDCMRKMLARDIRHLPVLDEESGTVVGMLSIK-------DLIKEVAHEKEALIAKL 196
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BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: D7G770_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G770_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 1.010e-41
Identity = 78/148 (52.70%), Postives = 111/148 (75.00%), Query Frame = 3 
Query:  264 TAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKNGV-VSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERDDLLMKM 704
            +A+ A +KSCYF ID+ I E +TVY+A+ R +AYN+G L VT +   V GI+SERDYV K+ALLGKASK T VKEI T G  +V A++SDT++ C+ KM+A D+RHLPV+D++ G+V G++SVK       DL+KE T+E++++L K+
Sbjct:   56 SAKDALQKSCYFKIDFGISEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTPVKEIATMGANLVIASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVK-------DLLKEVTREKEEILTKV 196
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BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: A0A4D9D580_9STRA (CBS domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D580_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.760e-40
Identity = 77/148 (52.03%), Postives = 103/148 (69.59%), Query Frame = 3 
Query:  264 TAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVT-KNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERDDLLMKM 704
            TAQ AWEKSCYF ID+KI E + +Y+A+ R +AYN+G L VT + G V G+ISERDYVCK          TTV E+CTRG  +V A  +D+I  C+KKM+A D+RHLPV+DD+  EV G++S+K       DL+KE  KE+DD++ K+
Sbjct:   65 TAQTAWEKSCYFKIDFKIPEEAMMYEAVQRFAAYNIGALAVTDQEGKVIGVISERDYVCK---------STTVGEVCTRGSNIVVAKTTDSIATCMKKMLAKDIRHLPVVDDEKKEVVGMLSIK-------DLIKELQKEKDDIIEKL 196
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Match: A0A6T9YKC1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YKC1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.570e-40
Identity = 83/182 (45.60%), Postives = 122/182 (67.03%), Query Frame = 3 
Query:  144 VPAAARATAAAQGVRAASACLGREVRSFSDAAAPAADDVRTAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKN-GVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEYTKERD 686
            +PAA+R  +AA  VR A+A      R+FS    P  +D  TA  AW+KSCY  +DY +++ STVYD + R++A+NVGCL+   N G ++G++SERDYVCKIALLGK SKDT +KEI T+   ++ A   D++E C++ M++ D+RHLP++D  + +V G+IS+K       DLVK    E++
Sbjct:   11 LPAASRIGSAAA-VRPAAAAPRFTARTFSG---PTVEDAVTADDAWKKSCYVEMDYTVNDESTVYDFVQRLAAFNVGCLVTVDNDGNITGVVSERDYVCKIALLGKTSKDTRIKEISTKAANLITATPEDSVEDCMQMMLSKDIRHLPLLDSSSKKVVGIISIK-------DLVKTLLDEKE 181
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L450_9PHAE1.000e-9293.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXG6_ECTSI1.390e-6894.40CBS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZG49_9STRA5.260e-5561.84CBS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S1XTH5_9STRA6.360e-4753.06Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U998_9STRA1.080e-4553.06Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UAT3_9STRA2.980e-4354.05Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835YGF7_9STRA5.150e-4351.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G770_ECTSI1.010e-4152.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9D580_9STRA3.760e-4052.03CBS domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A6T9YKC1_9STRA5.570e-4045.60Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1369contigE-siliculosus-1a_F_contig1369:17376..23192 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size660
Model size1709
Exons6
Ec32 orthologEc-07_003160.1
Ec32 ortholog descriptionCBS domain
Hectar predicted targeting categorymitochondrion
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2QQ7J@2759,COG0517@1
EggNOG free text desc.Domain in cystathionine beta-synthase and other proteins.
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0009651,GO:0009987,GO:0019725,GO:0042592,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0050897,GO:0065007,GO:0065008
Seed eggNOG ortholog2880.D7FXG6
Seed ortholog evalue3.6e-56
Seed ortholog score224.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1369.2199.1prot_E-siliculosus-1a_F_contig1369.2199.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1369 18354..22873 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927884.8413813-UTR-E-siliculosus-1a_F_contig1369:17375..183531622927884.8413813-UTR-E-siliculosus-1a_F_contig1369:17375..18353Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1369 17376..18353 -
1696318722.215402-UTR-E-siliculosus-1a_F_contig1369:17375..183531696318722.215402-UTR-E-siliculosus-1a_F_contig1369:17375..18353Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1369 17376..18353 -
1622927884.943057-UTR-E-siliculosus-1a_F_contig1369:22873..228911622927884.943057-UTR-E-siliculosus-1a_F_contig1369:22873..22891Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1369 22874..22891 -
1696318722.267499-UTR-E-siliculosus-1a_F_contig1369:22873..228911696318722.267499-UTR-E-siliculosus-1a_F_contig1369:22873..22891Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1369 22874..22891 -
1622927884.9627569-UTR-E-siliculosus-1a_F_contig1369:23139..231921622927884.9627569-UTR-E-siliculosus-1a_F_contig1369:23139..23192Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1369 23140..23192 -
1696318722.275211-UTR-E-siliculosus-1a_F_contig1369:23139..231921696318722.275211-UTR-E-siliculosus-1a_F_contig1369:23139..23192Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1369 23140..23192 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927884.8591595-CDS-E-siliculosus-1a_F_contig1369:18353..184311622927884.8591595-CDS-E-siliculosus-1a_F_contig1369:18353..18431Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 18354..18431 -
1696318722.2279685-CDS-E-siliculosus-1a_F_contig1369:18353..184311696318722.2279685-CDS-E-siliculosus-1a_F_contig1369:18353..18431Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 18354..18431 -
1622927884.8707182-CDS-E-siliculosus-1a_F_contig1369:20012..201891622927884.8707182-CDS-E-siliculosus-1a_F_contig1369:20012..20189Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 20013..20189 -
1696318722.2358615-CDS-E-siliculosus-1a_F_contig1369:20012..201891696318722.2358615-CDS-E-siliculosus-1a_F_contig1369:20012..20189Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 20013..20189 -
1622927884.88344-CDS-E-siliculosus-1a_F_contig1369:20648..207231622927884.88344-CDS-E-siliculosus-1a_F_contig1369:20648..20723Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 20649..20723 -
1696318722.2438505-CDS-E-siliculosus-1a_F_contig1369:20648..207231696318722.2438505-CDS-E-siliculosus-1a_F_contig1369:20648..20723Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 20649..20723 -
1622927884.896589-CDS-E-siliculosus-1a_F_contig1369:21433..215791622927884.896589-CDS-E-siliculosus-1a_F_contig1369:21433..21579Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 21434..21579 -
1696318722.2519846-CDS-E-siliculosus-1a_F_contig1369:21433..215791696318722.2519846-CDS-E-siliculosus-1a_F_contig1369:21433..21579Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 21434..21579 -
1622927884.9250708-CDS-E-siliculosus-1a_F_contig1369:22689..228731622927884.9250708-CDS-E-siliculosus-1a_F_contig1369:22689..22873Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 22690..22873 -
1696318722.2599473-CDS-E-siliculosus-1a_F_contig1369:22689..228731696318722.2599473-CDS-E-siliculosus-1a_F_contig1369:22689..22873Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1369 22690..22873 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1369.2199.1

>prot_E-siliculosus-1a_F_contig1369.2199.1 ID=prot_E-siliculosus-1a_F_contig1369.2199.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2199.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=220bp
MIRNVVRAVGGRASLKVAAGAPAQVPAAARATAAAQGVRAASACLGREVR
SFSDAAAPAADDVRTAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNV
GCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAA
RSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKASRRKESDLVKEY
TKERDDLLMKMLGLPPSSV*
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mRNA from alignment at E-siliculosus-1a_F_contig1369:17376..23192-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1369.2199.1 ID=mRNA_E-siliculosus-1a_F_contig1369.2199.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2199.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5817bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1369:17376..23192- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATCTGGTATACGTCTCCAACGAAGCGTACCGATCAGCCAGACCTTTCCCC
TATGTGAGTGCGCTTGTTCTTCTCTTTTCCTTAGTGCCTAGCTTGCGCTG
TTGGTTTCGAAGGTACGGTGTTCTTCCATCATGGTACGGCTTTGCACCAA
ACACTCCATTTTCCGGCAACAACACCCCACTCACACGCACGCTTCGCGCT
CCCTGCTGCCGAGACCTCAATAGACAACAACACCTCCGGCGCCCCAAGAG
TCTTCGACAAGCCCCTTTATTAACGATCTACCCTTGCTGTGCTTCTCGCA
GCAGCGGAAAACTATCACCATGATCCGCAACGTCGTGAGAGCGGTTGGGG
GACGAGCGTCGTTGAAGGTGGCGGCAGGAGCACCAGCACAGGTGCCTGCG
GCAGCAAGAGCTACCGCCGCTGCGCAAGGGGTGCGAGCGGCGTCCGCGTG
TCTAGGCAGGGAAGTGCGGAGTTTCAGCGACGCTGCCGCGCCTGCTGCCG
ATGGTGAGCCCTCGTTTTCTCGACGCCACGTGTGCGTGATATTTTTCATC
TCTCTCTCCTGGGCACACATGCATGCAAGCAAAGTGCCGCGATGCTTCAC
ACGAAAAGGCGGTGCAACAGCCGGGTAGGTGCTGGGTTGGGTTCCCCGGC
CGGAGAGCACCGCGCTACTACACGGCCGAGAGGCGGCAGCATGGCGTGGG
CGTACGCTCAGCGGGCACGTGTAGCAGCGATGTCCCGGCAGGAGACGCGT
GCGAACCAAGTTGCCGTGATATTGTGCTCTCGTATGTATGTACTGCACCT
TCCAAAAGACTACATAGCGTTGTATGCGTGCATAGTCTCGAATTCTTGCT
CTGTCGGCGTGTAGCTGCCGTATACTGGTCGGAGGTTGTAAGCATATGCA
TATAGATACACGCATCGTTGCGCGAGTGTTCCGGCGTCCAAGCTGGGGAC
CCGAAAGCCGATCAGTGCTCGGGTGTCACGCAACTGTATTTATCGTGTGG
ATTGCCTCCAATGCTGTTGCACCTTTTGTCGATTCCTTTTGTGAGGGGGG
GCCGGGCTCTTTGTGCAAGGGGTACCATCCCACTTCGGAAAGTACCTGAG
GTGGCCGCGTCACGATTTCACCATTAGAGGGGTGCGATGGCTTGTTGACA
CCGCGTTAGTTGTTCTAGGACCCAATGCTCTGTAGGTCTAAGGCGAGACG
TCCTCAATGATATGATAAATCTGAACAATTACGCAATATATACGTGAAAA
GCTCTCTATCTCATGTGTCGTTCTCTCTCCCTGGCTTCGGCCACTTCCAT
CAACATCTCGTGGATGACCAGTCTTGTATTGCGTGTGGTTGCATCGGTTG
AAGTGAGCAGATTGACGCCCGCTCAAGTGTACTCACGGCGAAAGACCCTC
TGCTAGTATGGGCGTGACAACAACCACCACGACGCCAGAGTTAACAAGCA
TCTTGCATGCAGAAAACCGGTTGTAGCACTCCTCGGAGTATACTGCTACT
ACGTGATAACGGACGACGGTGGATGTTCCTTACGCCAAATTTTTGCCAAC
GCCGCCGTCGCTGCCCTCCTTCCCTGTCATTGCCATGGCTCTTGGACGCC
CATTGATAACCAGATGTGCGCACGGCGCAGCACGCGTGGGAGAAGTCGTG
CTACTTCAACATCGACTACAAGATCGACGAGGCCTCCACGGTCTACGACG
CCATCAGCAGAATGTCGGCCTACAACGTCGGCTGCCTCATCGTCACGAAG
AACGGGGTGGTAAGCCTACATCGGAAGGACTCACGGAGTCATCAAAGTGT
TGGACTGTACATTGCTATTGCTCTCGGATTGTCGTTCCCTGCGTTGGATA
ATATCTTTCTTAGCGTAGTTGTTGCGCCTGTTCGTCCTGTTTCGCGAGTC
TCCACAGAGACACTTTCGAGTTTTTGCATTGATTGTAATTTTACCTTGAG
TGGGATCTCCGGTGCGAAAAGAACCGCTGCAAGCAGTGCGTTAGAACACT
CGTGTTAAACTCATCGCATCAATAACTCAAAGCATGCGTTGGAGTTTTCA
CACACCGATTCAATTCGTATCGTGTCATCCCACCGGATCTCGGGTAGTGG
TTAATGCTCTGTGTGGCTCTTGCTTGGGTGGCTTTTCTGGCCCCTGCCGT
CTGCATCATTGTCACTTTCAACGTAGACGGGAGAGCTTGGGTGGACCCTC
TTGACAACCCGAACTCTGTCCTCATCTGCCCTAACTGCTGTCATATTGTA
GTATTCCTTCACCCTCCTGGACTCAACAGATGGCGTGTTAAAAAAGGGTT
GACATACATCAGCCCGGGGGGGTTCCGGGCTTGCTTTTCTAGATCCAACC
GTTGTCCTGGAAAGTTTCTGCGTGGCAAGGATTCGTGTGGTAGTGTAACC
TGGCAAAGGTTCTACGAGTCTTACAGGAACACTTGTGTGTGTGCGTCGCA
TGCGCTTGAATTAATTAAGGTGTCTGGCATCATCTCAGAGCGCGACTACG
TCTGCAAGATCGCTCTGCTGGGCAAGGCTTCCAAGGACACCACGGTGAGA
CACAAGCGCTACAATAGCACGCCGAAAGCCAACCACATGCAGAGACTGCT
GTGCCGTCGACAGCCCATCTTTCGATCAGCATCGGGCGTAGATATACATA
GCTTAAGATAGACAGCTTAAGGCCGCGGTGGGATGGATGGTCGTGAGGTG
GGGAATTTCCCGCCGACATCTCACGTCATACCTCTGGTATGTCTGGTTTG
TTTGGCAAGAGAAGCTGTGGGGTTTCTCATTGGTGAGGGATCCGTGGCGG
CAGAATTTTCGTCGCTCCCGTCGCGTGTTCTTTTTTGTGTGGCCCCGTCG
TCGGTGGCGGTAAACGTGATGGCATGCCAACGCAGCATGCCTTGATTTTC
AACATGACATTTTTATCCACGAACGCACAAGTAGGCGAACACCAATTGCA
GCAACAGGAGTGGACATTGTCGTGTTCTTTATTTTTGCACGTGCGGGGTC
CAGGTTAAGGAGATTTGCACCCGGGGCCCCAAGATGGTGGCGGCGGCGCG
TTCGGACACGATCGAGGCATGCGTGAAGAAGATGATCGCCGCTGACGTGC
GCCACCTGCCCGTCATCGACGACGACACGGGCGAAGTCTTCGGCCTCATC
TCCGTCAAGGCAAGTCGACGAAAAGAGTCTGTTTTATCATAACTCTTGCC
CGGTGTGTTTTTTCGCCTCTTCTTTTCCGACGTCTCGTCTCTTCATTCAC
ATGCAGTGATTTCCTTCCTAGTGATTCCCTTCCTTTTGAGTCCCCGGGTC
CATTCGTAGTCTGAATTTGGTTGTTGCTGTTCAAGTCGAGACGGTTCTAG
TCTCGTATTCGGCCAAGTTAAGGAAGTGACGGCACGTGCGGCGTGGCACA
AGCAATGGTCGTTGCATTGGTTGCGCTCTCTTTGTCCAGCGACTTAATAA
CTCGTCGTCCGTGCACCCATCATGTGTGCTACGCCTCGTGACGAACTCCT
ACTTGTGTTTGAAGCCATGTTTTATCTTCGTTGTGCGGCAATCACCTCCT
GCTTGCGGTTCAACTCCCGATGTTCTGTACAGAGGGGGGCCCGGTATAGT
GCAGGTTGAATAGTGCAGGTGCCCGGTATAGTGCAGGTAAAATCTCTGGA
CACAGACAGCGCCCTCAATAGTGCAGGTCCTGCACTATCGAGGGCGGTCC
CGCTATAGTGCAGGTTGGACACACACAAACACACACAATCTTCTTCTGTT
GCTACCGTTTCTGTCTTTGATCCGGAGAAGAGGTAGGCTAGTCTCCCCCA
TGCCGCACCCTCACGGGGTCCCAGTTCATGGCATTTAGAAATGTTCTGGG
TTTTCACCCGCACTGAGACTGACGTCTTTTCATTGGTCAGCCGGTTAGCG
CGGTCGATGCTAATAATAAAAAAAACACACAATCCTTTTCATTGGTCAGC
CGGTTAGACACACGGACAGCGGACAAAGGCAACACAGAAACGAGGGTACA
CGTGATGCTGTAGACCCGAAGAGCTCTACGCAGAGGTGCACCATGCCTTG
TGCGGACGGTGACCTGGCGATGATATTCGCTAAGCGGGTGCGCCAGGCAG
ACATGCGGGAACTTTTCGCGACGTATTGAGGGCGGGGGGTACAGCTGTAG
CAAGCAGTGATTGTTTGTTTTGTTTTGTCTTTTTATCTTGCAACATTGAA
GGAGGGCAACGAGGACTGAGATTTAGCTTCGGTAGTTACGTATTCATGTT
GAAGGGTTGGTTCGCGCGACAGTTCAGGGTGTGCAGTACAGTGAATGCTG
AGGCAGGAAGAAAATAACGAACGGTGGAACATGCAAGTAATTTTTGTACA
ACCTCTGTGTGTCTGTGTGTGCGACAGGGGGGAACCACACGGGTCGCGAT
AACAGTCTGTCCACGCCCAAGCTAGAACAGGGCCCACTACTACTGTAGTT
CGATCCATCTCGTACCCAGTTAGCCCCCAAAGCGTGGGCGCCACATCATG
AAGTCAAACACCTCCTCAGTAGTGCAGGACCTGTACTATTGAGGGATACT
CGAAACCTCAATAGTGCCGAACCTGCACTATTGAGGCACTCTTCGGAGTA
GTGCAGGTGCCCGCTATAGTGCAGGTAAAATCGCTCGACACACCCCTGCA
CTATACCGGGCCCCCCTCTGTACTAGGTACCGCAATCAACGTTGAACACA
CCCTTCACTGTCGTTCACACACCCTTTTTTCTCTTGCAACCCTCTGGACG
TGCTGCTGCAGGACCTGGTTAAGGAGTACACTAAAGAACGCGATGACCTG
CTCATGAAGATGCTTGGACTCCCGCCGTCTTCCGTCTAAAGCTATCTGTA
GCTACAGCGCTAGCTTCGTTTTTCTTGTGGCGCCCGCGTGTTCCGTTGCT
TTGAGCTTGGTATGACCAAGGAAGAGCTTCGAACTACTCTGATTGGCGGA
CTGGCGCTTGATATCTTGGGTTAGGCAAGCGCCTTCGATCGATTGCCACT
CATGGATCCTACACGCCTATGTTTTCCCTCCAGCGCGATGGAGCTCTTTG
GATGGTTTTATTTCTGTTGCGACGCGTGAGGCGTTACCGCTCCCGCTTGG
CGAAGTAGAGGACTGCACCGGAAAACCAGGGAGGAGAAAGACCAAAAGTG
TTTGGGCATTCCGTGGTGCAGGGCCGAGAGCAGGTGTCAGCGTAATGATT
TTTTCCGCCTGCTGTCTCAGTAGTGGCGGTCGCATCTGCGTGGGCTCAAG
AGCAATTTGCATATGCACTTACTTGGAGAGTTTTCCGCCATGATTCCACG
CAGTTCCTCATGGCGAAATGAGTCATGGGCACGTGGGCACAGCTACTCAG
GACTCAAAATTCGATTTTCGTTTGTGCATAGATACAGGCTGCAGGGTACG
GTAAACTTAGCTGGGCCTGCATGGGGCCACTTTTCACTGTCGAGACCTGA
AGCGTGCGGTAAAGAAATAAAGGTGTTGTCGGTGAGCTCAGTTGCGGTTG
TGTGATAAAAAAGGTTTCAGCCGGCGTATGGTGCTTGTTCCGCCTCCGCC
GTAGGTATGCTGGTTGTGCGGAGGTGCACGGCTACACGGCGCAAGCGGTT
TCTTCGCACACAAACAAGCCCGTTCGGAGGTGCCTCTTCCGTGATTGCAC
TCCTTGGCTATTGAGCCTTGTGTTGAGCCCTTCGAACGCCCACTTCTGCG
TGCGCAAAAAGTGACACCGCACTACGATAACATGTATGTGTTGCCGTACA
TTCGAATCACAAGGAGTGCGAGTACCTCTGTTGTCCGTATTTCTCCGGCG
CTCGGCACGCCAGTACC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1369:17376..23192-

>mRNA_E-siliculosus-1a_F_contig1369.2199.1 ID=mRNA_E-siliculosus-1a_F_contig1369.2199.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2199.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1320bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1369:17376..23192- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATCCGCAACGTCGTGAGAGCGGTTGGGGGACGAGCGTCGTTGAAGGT
GGCGGCAGGAGCACCAGCACAGGTGCCTGCGGCAGCAAGAGCTACCGCCG
CTGCGCAAGGGGTGCGAGCGGCGTCCGCGTGTCTAGGCAGGGAAGTGCGG
AGTTTCAGCGACGCTGCCGCGCCTGCTGCCGATGATGATCCGCAACGTCG
TGAGAGCGGTTGGGGGACGAGCGTCGTTGAAGGTGGCGGCAGGAGCACCA
GCACAGGTGCCTGCGGCAGCAAGAGCTACCGCCGCTGCGCAAGGGGTGCG
AGCGGCGTCCGCGTGTCTAGGCAGGGAAGTGCGGAGTTTCAGCGACGCTG
CCGCGCCTGCTGCCGATGATGTGCGCACGGCGCAGCACGCGTGGGAGAAG
TCGTGCTACTTCAACATCGACTACAAGATCGACGAGGCCTCCACGGTCTA
CGACGCCATCAGCAGAATGTCGGCCTACAACGTCGGCTGCCTCATCGTCA
CGAAGAACGGGGTGATGTGCGCACGGCGCAGCACGCGTGGGAGAAGTCGT
GCTACTTCAACATCGACTACAAGATCGACGAGGCCTCCACGGTCTACGAC
GCCATCAGCAGAATGTCGGCCTACAACGTCGGCTGCCTCATCGTCACGAA
GAACGGGGTGGTGTCTGGCATCATCTCAGAGCGCGACTACGTCTGCAAGA
TCGCTCTGCTGGGCAAGGCTTCCAAGGACACCACGGTGTCTGGCATCATC
TCAGAGCGCGACTACGTCTGCAAGATCGCTCTGCTGGGCAAGGCTTCCAA
GGACACCACGGTTAAGGAGATTTGCACCCGGGGCCCCAAGATGGTGGCGG
CGGCGCGTTCGGACACGATCGAGGCATGCGTGAAGAAGATGATCGCCGCT
GACGTGCGCCACCTGCCCGTCATCGACGACGACACGGGCGAAGTCTTCGG
CCTCATCTCCGTCAAGGCAAGTCGACGAAAAGAGTCTGTTAAGGAGATTT
GCACCCGGGGCCCCAAGATGGTGGCGGCGGCGCGTTCGGACACGATCGAG
GCATGCGTGAAGAAGATGATCGCCGCTGACGTGCGCCACCTGCCCGTCAT
CGACGACGACACGGGCGAAGTCTTCGGCCTCATCTCCGTCAAGGCAAGTC
GACGAAAAGAGTCTGACCTGGTTAAGGAGTACACTAAAGAACGCGATGAC
CTGCTCATGAAGATGCTTGGACTCCCGCCGTCTTCCGTCTAAGACCTGGT
TAAGGAGTACACTAAAGAACGCGATGACCTGCTCATGAAGATGCTTGGAC
TCCCGCCGTCTTCCGTCTAA
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