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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 345 |
| Model size | 1067 |
| Exons | 3 |
| Ec32 ortholog | Ec-02_001570.1 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927878.9645343-UTR-E-siliculosus-1a_F_contig1361:29353..29384 | 1622927878.9645343-UTR-E-siliculosus-1a_F_contig1361:29353..29384 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1361 29354..29384 + |
| 1696318719.7653959-UTR-E-siliculosus-1a_F_contig1361:29353..29384 | 1696318719.7653959-UTR-E-siliculosus-1a_F_contig1361:29353..29384 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1361 29354..29384 + |
| 1622927879.0094624-UTR-E-siliculosus-1a_F_contig1361:32910..33601 | 1622927879.0094624-UTR-E-siliculosus-1a_F_contig1361:32910..33601 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1361 32911..33601 + |
| 1696318719.8027983-UTR-E-siliculosus-1a_F_contig1361:32910..33601 | 1696318719.8027983-UTR-E-siliculosus-1a_F_contig1361:32910..33601 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1361 32911..33601 + |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1361.2162.1 >prot_E-siliculosus-1a_F_contig1361.2162.1 ID=prot_E-siliculosus-1a_F_contig1361.2162.1|Name=mRNA_E-siliculosus-1a_F_contig1361.2162.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=115bp
MEGKAWTCDSLTISYASPRGTNRCRSCKLHMESGAIRFGMIFKCPSMSTM
LFQGFHLHCVQAPSFLTSIELLEGIEDISPSDVAIIERWIATGVARGMEG
CAAAAHSHQRRKTT* back to topmRNA from alignment at E-siliculosus-1a_F_contig1361:29354..33601+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1361.2162.1 ID=mRNA_E-siliculosus-1a_F_contig1361.2162.1|Name=mRNA_E-siliculosus-1a_F_contig1361.2162.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4248bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1361:29354..33601+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACCACAACCGATCACATCTATCTCAGCAAGATGGAGGGAAAAGCATGGA
CTTGCGACAGCCTGACCATCTCGTATGCATCTCCCAGAGGAACCAATCGG
TGCCGGTCGTGCAAGCTTCACATGGAGTCGGGCGCGATTCGTTTCGGGGT
ATGTATGTATGAATAAATAGAACATGTTTGCGATGTTTTCACACGTTACA
CGAGCACGTCTTGTAGATCAGACCCTCCCTTGGGGGACAAATGTGTCCCA
CGTCAGTACCAAGGCCACCCCGCCATGGCTATTTGCAGAGCCGGGGTGTT
CGTGCTTGGCGAGAGGTAGGTAGGTATTGTAGGTCAAAGTACGTGCTGTC
AGAATCCGAACCAAAACAAATTTTGAGCTACGCGGGGTTAAAAAAAGAGC
ACGTGTTGGCTGTCTCCGTACAAAATCGTCACTTCCCTCTAAGCAGCACG
TGCAGAGAATAAATACATAAATACACTTCGTTCCCTCCTAATATGTCCAA
AGTAGACAACCTGTTTCCAAAGGAAGGGGAGTCACTGAACCTTCTCACGA
TGACGCTAAAGGCATGGACGACAGATGCGTTCTTCTGTGTGATTCTGAAT
CATGGAACCCAAGCATCTAAGGCACGAGAAGCGAGAGTGCCAGAGTGGTG
TGGCAGATCTGTGAGACTGCTGCAGATGGCAAGTGCAAGACCACAAAACC
TCAATCAAGACCACAAAACCTCCCACACGGCTACAACACGGCGTGGGCAA
AAATATATTTAGTTGCCCACAGAGGTATGCATACCGATGCCATGTGCTCT
GGGCTCTAGAAACGGTGTGAACACCACCCGGTCCCCAAGGCAGGAACTCT
CTATTCCAACGTTTTACTGTTCTTGTTGTGCTCCTGCCCTCCCCGCCCTT
GTTCAAATTTCGTGCGGTATTACCAGCAAGAAAGAGCCAATAATATATTG
AGTACCTGGTAGATATGCTAATTGTAATTTCTTCTTGTCCTTGCGCGGCC
ACCAAGAAAGGCGTCACGGCACAGCAGGAGAGCAGTAGACCTACCCCAGA
TGTACCTACTCAAACCAACATTCTGGCTGGGTCGTCCATCGTATAGCGAG
AGCCTGCTCATTTCCAAAAATATATGCACACGAAGGTATGTAGTATGTAA
ATAGCGTCAACGAATAGAAAATGGAAAATGGCCTTGCTCTAGACTGCCTA
CATATACTAAATGTATGCGTTCTGCTGTTACGTAGTCTACCCTTCACAGT
CGTTACGAAACCTTTGCTGCACTCTTCTCGAGAGCTTCGCCGCGATGATC
AGCAGATGTCGATTGGTTGCGATCGTTGGACACCGAAAACGTCCAACGCA
AACATTATGGTTCCGCAATCCTGCGCGGGGCCTTTATTTGCGTTCGCGAA
CGTGGATCGGCCGCTACTCAAAAATGAAGGCGGTAAATTTATCGAATATT
TTGTCGAAGATATTTGGGGTAATACGCTATGCGTAGTCTAAGTTCAGCTC
AGCGTAAATATATTTACTTGGGTGGTTCCGATAAAAGACCCGTGTGTGAT
ACGGCAGTGTTTGTGTTGTACCATACAACCCAGCGTTTAGGGGCACGAGA
GGCTGCATCGCACCATGGACATACATTGAATTGGTGCTTCTTAGAACAGC
TGCCTGTACCCCTGCTTTAACTGCTGTTGTCTCGCCGAGAAGCCATCCTC
TACTTCGCCTTCGTTGCGACGGCCTTTTTACCTTTTGAGCTTGCGGAAGA
TGTGAACCTGTTGCCTTCTTCCTATTATCATGTCAACGGTGTGGCCAAAA
CGCTTTTCGGTTCTGTATTTGTCACGACATAGTTACGTTGCCACCATCTT
TCCTTGGCCTTTGTTTCGGCGCCGTTTTCATGCTGTGAGTTTGCGGATGA
TGTGATCCTGTTGCCTTCTTTGTATTGTCAAGTCAACGGTGTGGCCAAAA
CGCTTTTCGGTTGTGTAATTCTGTAATTGTCACGACATAGTTACGTTGCC
ACCGTCTTTCCTTCGCCTTCGTTTCGGCGGCCGTTACGTTGTGAGCTTGC
GGAAGATTTGAACCTATTACCTACTTCTTCCTATGATCAAATCAACGGTG
TGGCCACAACCCTTTCGGTTCTGTAATTGTCACGACATCTGCTTGCTGCT
GTACTGTAGTACGTATCGCAAGTCACCATCACCTTCCTTTCCTCCTTATA
TCCCCCCCACCAGTGTCTAACGACTACGGCATGCACGACTATGAGTACAC
CCCCCCCCCCCCCCCCCCCCCCGCCGCCCCGCCGCCCTACTGTTTGGCGG
CGTAGAGANNNNNNCCACCCCCCCCCCCCCCCCTCCCCCCTTCCCCCCCC
CCCCCCCCGTTTCACCCTCTCCGGCTGCCACCCCCTTCTTCAACCCCCCC
CCCCCCCCCCCCCCCCATACTGGTGGCCGAGTAGATTCTGTTGTGCGGGG
TCGAGAACCCTCACTTCGCGTAAACGGTGATAATCGCACCACGTTGTGTT
AAATTGGTCAAGCACCTCGAGGCCGTTACACAGCAGTGCTCACGACTGTC
TCTGAAGAGCATCAGAACATAAATAAGTCGTTCGCAGCTGTCATCCGTAC
GCTAGGAAGTAAGCACAAGATGCCGAACACCCTTAGCAGGATGCAGCGCA
CCCGCCATGCGACCCGCCGAATACCTCACGGCGTCTCGCACTTGGTGATG
TGAGAGCCTGGTCCGTGTTACAACCCGGTGTGCTCCGTCCCGGCTTTGTA
AGGATGCGAGGTCAATGGTCTAACGACTACGGCATGCACGCCTACGAGCA
CCCCCCCCCCCTCCCCCCCGTCTAGCTCTCTGCCCCCCGGTTCACACTGG
GCAATGCCTTGATGCGCACTACTGTAGGTGTCGCCCTCATTCCCGTTTTT
CTGATTTCCGCATCATCTCAACCTTCTAGTTTTTAATCGCGTGCACTTTT
AACGCTTCTTGTTTTTTTGCAGATGATCTTCAAATGCCCGTCTATGTCCA
CCATGCTCTTCCAAGGGTTTCACTTGCACTGCGTTCAAGCCCCGAGTTTC
CTGACATCCATCGAACTTCTTGAAGGAATCGAAGACATATCGCCGTCGGA
CGTCGCGATCATCGAGCGGTGGATAGCAACGGGAGTGGCTCGTGGAATGG
TAAGTTGCATGAAGTTGCCCACCCGCGCTGTACATATACGTATGCGAGCG
TGGGCGAGGAACGCCGGACCTGTCAACAACCCGTGTAGTATTAGACGCTG
CTGCATGTGAACTACAGTATATAGAAGTACGAGGCAAGGCGTGGTCTTCG
TATGTAGTATCGCATAGTACGCATACATTTCCAATACAGTACTGCTGTAC
TGCTGCTGTGTTGTTCGTCTTGTGGGTGGAGGCAGAACCAATGGGGTTGT
CTATATCAGAGATGTTGAACTTGCGCCCCGCCAGCGAGATTATTCATAGC
ACTACTCATTGCGCTGATAAATGGTCCGGCGGGCGGTTATTCTCCTTTTG
GCGCAGGAGGGATGCGCGGCTGCGGCACACAGCCACCAACGACGGAAAAC
GACATGACTCGGGTCTTCGTCTCATGCACGCGGAGATCGGAGACAGTGAA
GCCTTTGCTCTGTGCGTGTATAATCGTCCTGCTGGTGTATTGATTGATGT
GTTTTTTTTTTGGTGATGGGAATTATGCTCTACATACATACTTGTGAATT
GTTTTTTGTCACGTTTTTAACATCTATCTTGTGCCTCCCGGTTGACCCTG
GATTGTCCCAACCAGGTTGATTGAGGTTGTGAAATTTGTGTGCGAATTTT
TAGATACAATCATGTTTTGGGTCTCGCTGTTTACTTGGGATTTCGATTTC
CCCTCCTCCCCGCGTGCGCCCGATCTGGTCGTCGGTGGATGTGTCTCATT
GCTTTGTTGAATCCGGGTGTTAGCGTGCGTGGCGTCCACGTGTTCACCTG
TTTGGTGGGAAGGAACTAGGAACCGCTGTACTTGTCTGCTCCCCGCTGGG
TGCTTGTTCATCAACAGACGGAATTCTTTGGATAGTGCGTGTGTTCGGCT
GTGCATGTCATGTGTGTGTGGTGGTTGGTAGAACCGTGGTTAGGTTTTAT
GGTTGACGCAAGCGAGAAGGACAACAAACAGCGGCTGGAGCTTGCGTCAC
GCTAATTTTTACGTACATGATTCTGCTCGGTTCATGTCTTGTCAACAATA
AATAGGATTAGGACTTTTAGTGTGTCCCACGTTTTGCGAGTTGAGATT back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1361:29354..33601+ >mRNA_E-siliculosus-1a_F_contig1361.2162.1 ID=mRNA_E-siliculosus-1a_F_contig1361.2162.1|Name=mRNA_E-siliculosus-1a_F_contig1361.2162.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=690bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1361:29354..33601+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGAGGGAAAAGCATGGACTTGCGACAGCCTGACCATCTCGTATGCATC
TCCCAGAGGAACCAATCGGTGCCGGTCGTGCAAGCTTCACATGGAGTCGG
GCGCGATTCGTTTCGGGATGGAGGGAAAAGCATGGACTTGCGACAGCCTG
ACCATCTCGTATGCATCTCCCAGAGGAACCAATCGGTGCCGGTCGTGCAA
GCTTCACATGGAGTCGGGCGCGATTCGTTTCGGGATGATCTTCAAATGCC
CGTCTATGTCCACCATGCTCTTCCAAGGGTTTCACTTGCACTGCGTTCAA
GCCCCGAGTTTCCTGACATCCATCGAACTTCTTGAAGGAATCGAAGACAT
ATCGCCGTCGGACGTCGCGATCATCGAGCGGTGGATAGCAACGGGAGTGG
CTCGTGGAATGATGATCTTCAAATGCCCGTCTATGTCCACCATGCTCTTC
CAAGGGTTTCACTTGCACTGCGTTCAAGCCCCGAGTTTCCTGACATCCAT
CGAACTTCTTGAAGGAATCGAAGACATATCGCCGTCGGACGTCGCGATCA
TCGAGCGGTGGATAGCAACGGGAGTGGCTCGTGGAATGGAGGGATGCGCG
GCTGCGGCACACAGCCACCAACGACGGAAAACGACATGAGAGGGATGCGC
GGCTGCGGCACACAGCCACCAACGACGGAAAACGACATGA back to top
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