mRNA_E-siliculosus-1a_F_contig1341.2050.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: D7FQ18_ECTSI (Putative tRNA isopentenyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ18_ECTSI) HSP 1 Score: 945 bits (2442), Expect = 0.000e+0 Identity = 493/543 (90.79%), Postives = 503/543 (92.63%), Query Frame = 1
Query: 85 MAAAPLFLVWAPARALLGAAVSRLPSSTTRLLSCSQNKVRRRRGGSTASRTLSCSSSTAV----KDGAAKVIVIAGPTATGKSSVALALCRDLGGEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSTRAASMARNDWYRLSRSLEVLRVPNDTGEEVFTGVRTPINKKYDFRSFFIIGDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQEARLAD----------GSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLGGPIEEVPRRAGSGEKRGGGAKSHEAGSCARAGDGCGWRDVATSITEQFELPRASFDEELGGDYQTMLRSENRQRAGDMKRYVSELSLLGGGGNENEAFGRLVLETKELAARIRQAQPERFRDGAITERPAMEVQGWHAGNR 1671
MAAAPLFLVWAPARALLGAAVSRLPSSTTRLLS SQNKVRRRRG ST +DGAAKVIVIAGPTATGKSS+ALALCRDLGGEIVSCDSVQVYRDVFIGCNKPSP+EMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNS RAASMA+NDWYRLSRSLEVLRVPNDTGEEVFTGVR PINKKYDFRSFFIIGDRERLFRRIDKRCEEML+RGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFL QEARLAD GSADANREAT+VTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLGGPIEEVPRRAGSGEKRGGGAKSHEAGSCARAGDGCGWRDVATSI EQFELPR FDE+LGG+ Q MLRSENRQRAGDMKRYVSELSLLGGGG ENEA GRLVLET+ELAARIRQAQ E+FRDGAITERPAMEVQGWHAGNR
Sbjct: 1 MAAAPLFLVWAPARALLGAAVSRLPSSTTRLLSYSQNKVRRRRGASTXXXXXXXXXXXXXXXXXEDGAAKVIVIAGPTATGKSSIALALCRDLGGEIVSCDSVQVYRDVFIGCNKPSPEEMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSRRAASMAKNDWYRLSRSLEVLRVPNDTGEEVFTGVRAPINKKYDFRSFFIIGDRERLFRRIDKRCEEMLMRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLHQEARLADDLRPAIAGASGSADANREATEVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLGGPIEEVPRRAGSGEKRGGGAKSHEAGSCARAGDGCGWRDVATSIAEQFELPRERFDEDLGGESQAMLRSENRQRAGDMKRYVSELSLLGGGGTENEALGRLVLETEELAARIRQAQHEQFRDGAITERPAMEVQGWHAGNR 543
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: W7T6K3_9STRA (Trna dimethylallyltransferase 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6K3_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.700e-91 Identity = 171/355 (48.17%), Postives = 217/355 (61.13%), Query Frame = 1
Query: 280 KVIVIAGPTATGKSSVALALCRDLG----GEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVAPLD--ETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSTRAASMARNDWYRLSRSLEVLRVPNDTGEEV---------------FTGVRTP-INKKYDFRSFFIIGDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQEARLADGSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLG--GPIEEVPR 1272
KV+V+ GPTA GKS++AL +C+DL GEI+S DSVQVYR + +G NKPS E V HHL+DV D E FTAGDFV++AE AIDD+L+RG +PVVVGGT MY WLV G+PDAPK DP + Q L PF D+ DW G L LL A N+ RAA + NDWYRL R+LEV + G + FTG+R+ +++KYDFR FF+I RE L R ID+RC +M+ GLL ETA LL G L+P+SP GRAIGYRQ I++L +E G EAT + EF FA TR+Y+ +QM WFR+ +F W W+L GP+ + R
Sbjct: 75 KVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKE-----GIEGEMAEATALQ------------EFLEDFATATRRYAKQQMVWFRAQA--EFMWLRWNLQDLGPVLDAVR 410
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: A0A835YP32_9STRA (IPP transferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP32_9STRA) HSP 1 Score: 284 bits (727), Expect = 3.890e-87 Identity = 151/308 (49.03%), Postives = 199/308 (64.61%), Query Frame = 1
Query: 337 LCRDLGGEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVA-PLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSTRAASMARNDWYRLSRSLEVLRVPNDTGEEVFTGVRT-PINKKYDFRSFFIIGDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQEARLADGSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLGGP 1254
+C+ +GGEIVS DSVQ+YR + +G NKPS +++ VRHHLV++ P E +T G +++ A AAIDD+L RG+VP+VVGGTM+Y WLV G+PDAP+ D A Q V T L PF GDWDG LELL AVN+TRAA + +NDW RL RSL++ + G+EVFTG RT +++YD RS+FI+ DR RRI +RC+ ML GLL E A LL G+L S GRAIGYRQ ++LL+ + A D A ++F+ F TR+Y+ +Q+KWFRSSKG +F W A D P
Sbjct: 3 VCKAVGGEIVSADSVQIYRRLDVGANKPSAEDLAAVRHHLVNILDPGSEEYTVGQWLRAAYAAIDDVLQRGKVPLVVGGTMLYTQWLVQGQPDAPEGDAATQQIVRTILAPFEATGDWDGGLELLRAVNATRAAQLNKNDWVRLGRSLQIS-MDMRQGDEVFTGERTGAASERYDVRSYFIVADRAEAARRITQRCQAMLSSGLLQEVAALLHAGLLPKESSPGRAIGYRQMREYLLRP----------DPHAGDAEA---------LVQFYSDFCTATRRYASDQLKWFRSSKGTEFVWCARDFADP 290
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.020e-84 Identity = 171/355 (48.17%), Postives = 218/355 (61.41%), Query Frame = 1
Query: 280 KVIVIAGPTATGKSSVALALCRDLG----GEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVAPLD--ETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSTRAASMARNDWYRLSRSLEVLRVPNDTGEEV---------------FTGVRTP-INKKYDFRSFFIIGDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQEARLADGSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLG--GPIEEVPR 1272
KV+V+ GPTA GKS++AL +C+DL GEI+S DSVQVYR + +G NKPS E V HHL+DV D E FTAGDFV++AE AIDD+L+RG +PVVVGGT MY WLV G+PDAPK DP + Q L PF D+ DW+G L LL A N+ RAA + NDWYRL R+LEV + G + FTG+R+ +++KYDFR FF+I RE L R ID+RC +M+ GLL ETA LL G L+P+SP GRAIGYRQ I++L +E G EAT + EF FA TR+Y+ +QM WFR+ +F W W+L GP+ + R
Sbjct: 2472 KVVVVTGPTAVGKSNLALRICQDLAQGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWEGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREDLCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKE-----GIEGEMAEATALQ------------EFLEDFATATRRYAKQQMVWFRAQA--EFIWLRWNLQDLGPVLDAVR 2807
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: A0A8J5XJR5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJR5_DIALT) HSP 1 Score: 275 bits (703), Expect = 1.290e-82 Identity = 152/318 (47.80%), Postives = 193/318 (60.69%), Query Frame = 1
Query: 283 VIVIAGPTATGKSSVALALCRDLGGEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSTRAASMARNDWYRLSRSLEVLRVPNDTGEEVFTGV-RTPINKKYDFRSFFIIGDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQ-EARLADGSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSW 1230
VIVIAGPT GKS VA+ L LGGEI+S DSVQVYR + +G NKPS EM+ VRHHLV V E + AG+F + A AI D+ +RGR + VGGT MY+HWL++G P APK DPA+A VA L P + WD A+ LL A + RAA++ RNDWYRL R+L + + E+ R +++ YD R+FF++ RE+L RRID RCE ML GLL ET+ LL G L P S GRA+GYRQA+D+L++ +AR ADG A FL F F +R Y+ +QMKWFR F W
Sbjct: 42 VIVIAGPTGVGKSDVAMQLAARLGGEIISVDSVQVYRSLDVGSNKPSAAEMRRVRHHLVSVREPSEPYAAGNFYRDAADAIADVHARGRWAICVGGTSMYMHWLINGTPTAPKADPALAAQVAARLAPLREAHAWDDAIALLRASDPERAAALGRNDWYRLMRALTIAAQTSTPLAELRRDEGREQLHELYDLRAFFLVAPREQLARRIDARCERMLADGLLRETSALLASGELHPDSQPGRAVGYRQAVDYLIRTDARDADGDA--------------------FLAFARAFTQASRAYAAQQMKWFRKEPA--FEW 337
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: A0A7S3S7Q7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S7Q7_EMIHU) HSP 1 Score: 271 bits (694), Expect = 6.890e-81 Identity = 176/476 (36.97%), Postives = 235/476 (49.37%), Query Frame = 1
Query: 274 AAKVIVIAGPTATGKSSVALALCRDLGGEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSTRAASMARNDWYRLSRSLEVLRV-----------PNDTGEEVFTGVRTPINKKYDFRSFFIIGDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQEARLADGSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLGGPIEEVPRRAGSGEKRGGGAKSHEAGSCARAGDGCGWRDVATSITEQFELPRASFDEELGGDYQTMLRSENRQRAGDMKRYVSELSLLGGGGNENEAFGRLVLETKELAARIRQAQPERFRDGAITERPAMEVQGWHAGN 1668
A +V+V+AGPTA GKS++ + LC L GE+VS DSVQVYR + IG NKPS E HHL+DVA L + +TAG F A A+D++LSRG+ PV+VGGT MYL WLVHG+P AP+ DPAVA A L P+ + DW+G L LL A++ RAA ++ NDWYRL R+L V P+D+G + + D R FF+ R L RRID+RC ML GLL E + LL++ L P+ PAGRAIGYRQA+++LL+ A R+A +++ F FAA +R+Y+ +Q KWFRS F W D P EV A + PR +++L Q +R+ MKRYV L E+ A G +L + QA D + E WHA +
Sbjct: 49 ARRVVVVAGPTAVGKSALGMRLCEALPGELVSVDSVQVYRGLQIGANKPSAVERARTAHHLIDVAELSDDYTAGTFYADALTAVDEVLSRGKTPVLVGGTSMYLRWLVHGRPTAPRSDPAVAAAARDALQPYQEAADWEGGLALLRALDGPRAAQLSANDWYRLHRALVVAMQTRSQAAALPPPPDDSGLDA-------LRASLDLRCFFLTAPRVPLCRRIDERCGAMLQAGLLREVSDLLLQRKLLPSHPAGRAIGYRQALEYLLRPCY-------APRDADALSS------------FVHAFAAASRRYAQQQTKWFRSEPS--FEWVDVDWSAP--EV---------------------------------AAERVLASVRKPRLEHEDDLAAPRQAEMRAVKPDEGKAMKRYVERHDAL-----EDAAVGEALLREADACCEALQAARA---DLLAADEALAERYPWHAAD 453
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: A0A7S4BQD7_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BQD7_CHRCT) HSP 1 Score: 251 bits (642), Expect = 1.170e-74 Identity = 142/318 (44.65%), Postives = 184/318 (57.86%), Query Frame = 1
Query: 280 KVIVIAGPTATGKSSVALALCRDLGGEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSTRAASMARNDWYRLSRSLEVLRVPNDTGEEVFTGVRTPINKKY----------DFRSFFIIGDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQEARLADGSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFR 1203
+VIV+ GPTA GKS++ L LC L GE++S DSVQVYR + IG NKPS E+ V HHLVD+ + +TAG F + A A+ +L RG+ PV+VGGT MYL WLV+G+PDAP+ DPA+A+ L + GDW+ AL LA +S RA + NDWYRL R+L V+ + G T P+ + D R FF+ RE+L RRID RCE+M+ GL+ E A LL L P+SPAGRAIGYRQ ID+LL+E + D F FAA +RQY+ +Q KWFR
Sbjct: 40 RVIVLTGPTAVGKSALGLRLCEALPGELISVDSVQVYRGLQIGANKPSASELARVPHHLVDICEPRDDYTAGAFYRDALKAVKQVLERGKTPVLVGGTSMYLKWLVNGRPDAPRSDPAIAKRAHAMLQDYEKAGDWNSALSRLAEYDSHRAKELFANDWYRLHRAL-VVALQTQEGS---TNQEEPVEPEVLQLDELRASLDMRCFFLTFPREQLCRRIDSRCEQMVQAGLIEEVAELLATERLLPSSPAGRAIGYRQTIDYLLREPFVPDDKG-------------------ALQHFVEGFAAASRQYAAKQTKWFR 334
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: A0A0M0K692_9EUKA (tRNA dimethylallyltransferase 9 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K692_9EUKA) HSP 1 Score: 251 bits (640), Expect = 7.110e-74 Identity = 158/404 (39.11%), Postives = 202/404 (50.00%), Query Frame = 1
Query: 337 LCRDLGGEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSTRAASMARNDWYRLSRSLEVL-----------RVPNDTGEEVFTGVRTPINKKYDFRSFFIIGDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQEARL-ADGSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLGGPIEEVPRRAGSGEKRGGGAKSHEAGSCARAGDGCGWRDVATSITEQFELPRASFDEELGGDYQTMLRSENRQRAGDMKRYVSELSLL 1512
LC L GE++S DSVQVYR + IG NKPS E + HHL+DV DE +TAG F A A++++L+RGRVPV+VGGT MYL WLV G+P+APK DPA+A+ V L P G W LE LAA++ RA ++RNDWYRLSR+L V R+P+ G + + D R FF+ RE L RRID RCE ML GLL E + LL G L P+SPAGRAIGYRQ +D+LL+ A+G A +EF F A +R+Y+ +Q+KWFR+ F W D P V + Q +L RA F++ L Q LR+ A MK Y L L
Sbjct: 3 LCELLPGELISVDSVQVYRGLQIGANKPSADERARIVHHLLDVRDPDEEYTAGAFYADALRAVEEVLARGRVPVLVGGTSMYLRWLVSGRPEAPKADPAIAERVRLLLAPLEASGSWAEGLEQLAALDGARAEMLSRNDWYRLSRALTVALQTSSTAAALPRLPDPEGLDA-------LRSSLDLRCFFLAAPREALCRRIDARCEAMLEAGLLEEVSSLLASGRLLPSSPAGRAIGYRQVLDYLLRSPWAPAEGVA--------------------LVEFLEGFTAASRRYAAQQVKWFRNEP--QFEWVEADWAAP-----------------------------------ETVEQHVLGQLDLERARFEQLLQAPRQAELRALRPDEAKRMKTYAPRLRAL 342
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: A0A7S4F577_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F577_CHRCT) HSP 1 Score: 252 bits (644), Expect = 1.380e-73 Identity = 167/445 (37.53%), Postives = 219/445 (49.21%), Query Frame = 1
Query: 280 KVIVIAGPTATGKSSVALALCRDLGGEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSTRAASMARNDWYRLSRSLEVLRVPNDTGEEVFTGVRTPINKKY----------DFRSFFIIGDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQEARLADGSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLGGPIEEVPRRAGSGEKRGGGAKSHEAGSCARAGDGCGWRDVATSITEQFELPRASFDEELGGDYQTMLRSENRQRAGDMKRYVSELSLLGGGGNENEAFGRLVLETKELAARI 1584
+VIV+ GPTA GKS++ L LC L GE++S DSVQVYR + IG NKPS E+ V HHLVD+ + +TAG F + A A+ +L RG+ PV+VGGT MYL WLV+G+PDAP+ DPA+A+ L + GDW+ AL LA +S RA + NDWYRL R+L V+ + G T P+ + D R FF+ RE+L RRID RCE+M+ GL+ E A LL L P+SPAGRAIGYRQ ID+LL+E + D F FAA +RQY+ +Q KWFR K F W G E T++ + + RA F+EEL Q LR R M+ Y+ LL G + L+ AAR+
Sbjct: 40 RVIVLTGPTAVGKSALGLRLCEALPGELISVDSVQVYRGLQIGANKPSASELARVPHHLVDICEPRDDYTAGAFYRDALKAVKQVLERGKTPVLVGGTSMYLKWLVNGRPDAPRSDPAIAKRAHAMLQDYEKAGDWNSALSRLAEYDSHRAKELFANDWYRLHRAL-VVALQTQEGS---TNQEEPVEPEVLQLDELRASLDMRCFFLTFPREQLCRRIDSRCEQMVQAGLIEEVAELLATERLLPSSPAGRAIGYRQTIDYLLREPFVPDDKG-------------------ALQHFVEGFAAASRQYAAKQTKWFR--KEPLFRWVETTSIGTAE-------------------------------------TTLMQATRIGRAEFEEELRSTSQISLRRVTRDEQKAMRCYMRIDGLLCDGAR----WRALLARADACAARL 418
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Match: A0A8J2S9H3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9H3_9STRA) HSP 1 Score: 249 bits (637), Expect = 1.570e-73 Identity = 143/313 (45.69%), Postives = 193/313 (61.66%), Query Frame = 1
Query: 277 AKVIVIAGPTATGKSSVALALCRDLGGEIVSCDSVQVYRDVFIGCNKPSPQEMKEVRHHLVDVAPLDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVN---STRAASMARNDWYRLSRSLEVLRVPNDTGEEVFTGVRTPINKKYDFRSFFII-GDRERLFRRIDKRCEEMLIRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLLQEARLADGSADANREATDVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFR 1203
A+V+V+AGPTA GKSS AL LC GE+VS DSVQ+YR + +G NKPSP E++ VRHHLVDVA E ++AG + A A+ D++ RG++PVVVGGTMMY WLV G PDAPK A + L P+ D DW+ AL +AA + + R A +++ND+YRLSR+LE+ + + G R + +D R F+ DR L+ ID+RC+ ML RGLL ETA L G L +S A RAIGYRQA+D+L EAR++ G ADA+ E+ ++ F F +R Y+ EQ+KW+R
Sbjct: 8 ARVLVVAGPTAVGKSSAALRLCEARDGELVSADSVQLYRGLDVGSNKPSPAELQRVRHHLVDVADASEPWSAGAWCAAAAEAVGDVVKRGKLPVVVGGTMMYAQWLVRGAPDAPKASATAAASAQEFLAPYGD--DWESALSAVAARSEACAARVAKLSQNDFYRLSRALEI-ELDREAGGGSVEARRPVLGSDFDVRCAFLAPADRTALYHAIDERCDIMLARGLLEETANLRAAGRLPSSSTAARAIGYRQALDYL--EARVS-GEADASLES--------------YVAFCRQFRTASRNYAAEQLKWYR 300 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1341.2050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1341.2050.1 >prot_E-siliculosus-1a_F_contig1341.2050.1 ID=prot_E-siliculosus-1a_F_contig1341.2050.1|Name=mRNA_E-siliculosus-1a_F_contig1341.2050.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=543bp MPLAWPKSLPLIFMAAAPLFLVWAPARALLGAAVSRLPSSTTRLLSCSQNback to top mRNA from alignment at E-siliculosus-1a_F_contig1341:1379..5741- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1341.2050.1 ID=mRNA_E-siliculosus-1a_F_contig1341.2050.1|Name=mRNA_E-siliculosus-1a_F_contig1341.2050.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4363bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1341:1379..5741- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1341:1379..5741- >mRNA_E-siliculosus-1a_F_contig1341.2050.1 ID=mRNA_E-siliculosus-1a_F_contig1341.2050.1|Name=mRNA_E-siliculosus-1a_F_contig1341.2050.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3258bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1341:1379..5741- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |