mRNA_E-siliculosus-1a_F_contig1339.2040.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1339.2040.1
Unique NamemRNA_E-siliculosus-1a_F_contig1339.2040.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: A0A6H5K7Z6_9PHAE (DUF4440 domain-containing protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Z6_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 2.930e-140
Identity = 208/217 (95.85%), Postives = 211/217 (97.24%), Query Frame = 1 
Query:    1 MMNFGKMPAGRTASRLARVVGKSESSIQSSVRAAGSMNALLSTRSGLTVTQAATRLAAVKLPVRHMSGQADYAANYTADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQH 651
            MMNFGKMPAGRTASRLARVV KSESSIQSSVRA GSMNALLSTRSGLTVTQAATRL AVKLPVR MSGQADYAANYT+DQKAVDAATRNWRD VT+NTEDAPKKTAAIYADDALFWGTVSE+VRNTP HVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQH
Sbjct:    1 MMNFGKMPAGRTASRLARVVSKSESSIQSSVRAGGSMNALLSTRSGLTVTQAATRLTAVKLPVRQMSGQADYAANYTSDQKAVDAATRNWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEQVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQH 217
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: A0A6H5K6U8_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U8_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 6.190e-101
Identity = 146/152 (96.05%), Postives = 150/152 (98.68%), Query Frame = 1 
Query:  196 MSGQADYAANYTADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQH 651
            MSGQADYAANYTADQKAVDAATR+WRD VT+NTEDAPKKTAAIYADDALFWGTVSEEVRNTP HVYDYFDFFARMPKLSMVAYDPAPPRIHGDFA+HAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVM+EHHSSAMPKAPPGLKPAQH
Sbjct:    1 MSGQADYAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAVHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLKPAQH 152
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 4.890e-49
Identity = 91/144 (63.19%), Postives = 106/144 (73.61%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK------WVMVEHHSSAMPKAPPGLKP 642
            T DQKAV A T  W+D VT  T+DAPKKTAA+YA DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G+FA+ AG YTFAW G DG   E RARF+F +RR  GK      W +VEHHSS+MP AP  LKP
Sbjct:  291 TPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRR--GKPGSPQPWTIVEHHSSSMPIAPAELKP 432
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 2.920e-48
Identity = 89/144 (61.81%), Postives = 105/144 (72.92%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENG----KWVMVEHHSSAMPKAPPGLKPAQ 648
            T DQKAV A T  W+D VT  T+DAPKKTAA+YA DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G FA+ AG YTFAW G DG   E RARF+F +RR+       W +VEHHSS+MP AP  LKP +
Sbjct:  285 TPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVE 428
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.010e-46
Identity = 87/141 (61.70%), Postives = 105/141 (74.47%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK----WVMVEHHSSAMPKAPPGLK 639
            T D KAV   T  W++ VT  TEDAPKKTAA+YA+DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G FA+ AG YTFAW G DG   E RARF+F +RR++ +    W +VEHHSS+MP AP GLK
Sbjct: 1415 TPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLK 1555
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 4.780e-46
Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK------WVMVEHHSSAMPKAPPGLK 639
            T DQKAV   T  W+D VT  T+DAPKKTAA+YA DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL ++ Y PAP R++G+FA+ AG YTFAW G DG   E RARF+F +RR  GK      W +VEHHSS+MP AP  LK
Sbjct:  320 TPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRR--GKPGSPRPWTIVEHHSSSMPDAPAELK 460
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.600e-45
Identity = 83/141 (58.87%), Postives = 102/141 (72.34%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK----WVMVEHHSSAMPKAPPGLK 639
            T + KA    T  W+D VT  TEDAPKKT+A+Y +DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G FA+ AG YTFAW G D    E RARF+F +RR++ +    W +VEHHSS+MP AP GLK
Sbjct:  290 TPEMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLK 430
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 1.180e-44
Identity = 82/142 (57.75%), Postives = 100/142 (70.42%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK---WVMVEHHSSAMPKAPPGLKPA 645
            T DQKAV A    W+D VT  T+D P+KTA +YA DA  WGTVSEEVR+TP  +Y YFD+FAR+P L +V Y P   R++GDFA+ AG YTF+W   DG   E RARF+F +RR+  K   W +VEHHSS+MP AP GLKPA
Sbjct:  184 TPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRDPSKPQQWAIVEHHSSSMPTAPAGLKPA 325
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.970e-43
Identity = 82/142 (57.75%), Postives = 100/142 (70.42%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK---WVMVEHHSSAMPKAPPGLKPA 645
            T DQKAV A    W+D VT  T+D P+KTA +YA DA  WGTVSEEVR+TP  +Y YFD+FAR+P L +V Y P   R++GDFA+ AG YTF+W   DG   E RARF+F +RR+  K   W +VEHHSS+MP AP GLKPA
Sbjct:  329 TPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRDPNKPQQWAIVEHHSSSMPTAPAGLKPA 470
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 2.670e-41
Identity = 80/165 (48.48%), Postives = 104/165 (63.03%), Query Frame = 1 
Query:  154 AATRLAAVKLPVRHMSGQADYAANYTADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK---WVMVEHHSSAMPKAPPGLK 639
            AAT +    +PV   +G    AA    D+K V+  T  W++ VT  T DAP+KTA +YA D + WGTVSEEVR+TP  +YDYFD+FAR+P L +  + P   R++GDFA  AG YTF W G DG   E RARF+F +R +      W +VEHHSS+MP +P  LK
Sbjct:   80 AATAMGLTAVPVTRSAG----AAVTEGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLK 240
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1339.2040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7Z6_9PHAE2.930e-14095.85DUF4440 domain-containing protein n=7 Tax=Ectocarp... [more]
A0A6H5K6U8_9PHAE6.190e-10196.05DUF4440 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JT29_9PHAE4.890e-4963.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF8_ECTSI2.920e-4861.81Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5LB09_9PHAE1.010e-4661.70Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0Z5_9PHAE4.780e-4661.54PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FN21_ECTSI1.600e-4558.87Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JX02_9PHAE1.180e-4457.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF9_ECTSI1.970e-4357.75Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JSB2_9PHAE2.670e-4148.48DUF4440 domain-containing protein n=2 Tax=Ectocarp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1339contigE-siliculosus-1a_F_contig1339:720..4594 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size654
Model size1644
Exons6
Hectar predicted targeting categorymitochondrion
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2S0Y2@2759,COG4875@1
EggNOG free text desc.SnoaL-like domain
Seed eggNOG ortholog2880.D8LFN9
Seed ortholog evalue2.8e-117
Seed ortholog score427.9
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927856.8536234-UTR-E-siliculosus-1a_F_contig1339:719..16781622927856.8536234-UTR-E-siliculosus-1a_F_contig1339:719..1678Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1339 720..1678 -
1696318710.7219465-UTR-E-siliculosus-1a_F_contig1339:719..16781696318710.7219465-UTR-E-siliculosus-1a_F_contig1339:719..1678Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1339 720..1678 -
1622927857.1841354-UTR-E-siliculosus-1a_F_contig1339:2118..21491622927857.1841354-UTR-E-siliculosus-1a_F_contig1339:2118..2149Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1339 2119..2149 -
1696318710.733862-UTR-E-siliculosus-1a_F_contig1339:2118..21491696318710.733862-UTR-E-siliculosus-1a_F_contig1339:2118..2149Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1339 2119..2149 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927857.1954274-CDS-E-siliculosus-1a_F_contig1339:2149..21611622927857.1954274-CDS-E-siliculosus-1a_F_contig1339:2149..2161Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 2150..2161 -
1696318710.743386-CDS-E-siliculosus-1a_F_contig1339:2149..21611696318710.743386-CDS-E-siliculosus-1a_F_contig1339:2149..2161Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 2150..2161 -
1622927857.2048895-CDS-E-siliculosus-1a_F_contig1339:2390..26301622927857.2048895-CDS-E-siliculosus-1a_F_contig1339:2390..2630Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 2391..2630 -
1696318710.7542524-CDS-E-siliculosus-1a_F_contig1339:2390..26301696318710.7542524-CDS-E-siliculosus-1a_F_contig1339:2390..2630Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 2391..2630 -
1622927857.215924-CDS-E-siliculosus-1a_F_contig1339:2975..31421622927857.215924-CDS-E-siliculosus-1a_F_contig1339:2975..3142Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 2976..3142 -
1696318710.7645726-CDS-E-siliculosus-1a_F_contig1339:2975..31421696318710.7645726-CDS-E-siliculosus-1a_F_contig1339:2975..3142Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 2976..3142 -
1622927857.224959-CDS-E-siliculosus-1a_F_contig1339:3574..36021622927857.224959-CDS-E-siliculosus-1a_F_contig1339:3574..3602Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 3575..3602 -
1696318710.773377-CDS-E-siliculosus-1a_F_contig1339:3574..36021696318710.773377-CDS-E-siliculosus-1a_F_contig1339:3574..3602Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 3575..3602 -
1622927857.235437-CDS-E-siliculosus-1a_F_contig1339:4387..45941622927857.235437-CDS-E-siliculosus-1a_F_contig1339:4387..4594Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 4388..4594 -
1696318710.781741-CDS-E-siliculosus-1a_F_contig1339:4387..45941696318710.781741-CDS-E-siliculosus-1a_F_contig1339:4387..4594Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 4388..4594 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1339.2040.1prot_E-siliculosus-1a_F_contig1339.2040.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1339 2150..4594 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1339.2040.1

>prot_E-siliculosus-1a_F_contig1339.2040.1 ID=prot_E-siliculosus-1a_F_contig1339.2040.1|Name=mRNA_E-siliculosus-1a_F_contig1339.2040.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=218bp
MMNFGKMPAGRTASRLARVVGKSESSIQSSVRAAGSMNALLSTRSGLTVT
QAATRLAAVKLPVRHMSGQADYAANYTADQKAVDAATRNWRDNVTANTED
APKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDP
APPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEH
HSSAMPKAPPGLKPAQH*
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mRNA from alignment at E-siliculosus-1a_F_contig1339:720..4594-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1339.2040.1 ID=mRNA_E-siliculosus-1a_F_contig1339.2040.1|Name=mRNA_E-siliculosus-1a_F_contig1339.2040.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3875bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1339:720..4594- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGAACTTTGGAAAGATGCCCGCGGGAAGGACGGCGTCCAGGCTGGC
AAGGGTCGTCGGCAAGAGCGAGTCCAGCATCCAGAGCAGCGTCCGGGCCG
CCGGCTCGATGAACGCTCTGCTGTCGACGAGGTCTGGCCTCACCGTCACC
CAGGCGGCGACCAGGCTTGCCGCCGTGAAGCTCCCGGTTAGGCACATGTC
TGGACAGGTGAGGCGATGTGCACCAACTCTGACGGCGTGTCTGGAAGCCC
TATTATCTTTTGTTTGTGTGATCGTTCTGTCTCGTGCGCATGTAGACGTA
TGCATGTTCTTCACGACCATGCGGCATATTTATGAAAGGATCTTGTGTTC
GTCGTGTTACACGTCACCCGCGATATTGCTACACTTCATGGATCATGTCG
AGGCTCACGCGTGCGTTCGTGAAAGCTACTGGAAGACAAGCACCAGCCCA
AGTACCTTACAATGATTTCCAATACCCCCCGCACAACCCTGTAGTCTGAT
AGGATCGCTTCCACCGAGAAGCCGTGACTGCACCTCTCGATTCGCCGCAT
GAGCACGCAGCACATGAAAGCCTGGTACTTCGGGAAGATGTCTCTCGGGC
CTCGGGCCTCTTCGCGCCGCCGTAGTCTTTTGTTTCCGTGTCATGTCGTG
TTCCATCATGCTGTGCGCGCTCCCACAAAGCGGTGCCTTGCACTTTTCTC
AATACTGCCATACCCCCTGTCGCACGCGGGCGCAGGTACGTGCTGTGCCG
CTTTGTCTCAAGCAAACAGGCCGCGAAAGTCTACAACATGCTGTACATGC
AGATTCGTCTCTCGTGTCCGCCTCCGCCTTGATTAAATTGAATGGGTAGA
TATGCGCTCTGCTTAGCAGTGCGATTTAGCCGTGCGATTGTGACAAACCG
CTAAATTGCGCTCCCCAACCCGATCGCTCTATCTCCCTGAACGTGCTGAA
ACAATGTGCCTGACGCGCCCGCCATCACGCGGACCTGTTCAGGCCGACTA
CGCGGCCAACTACACCGCCGGTGAGTCAACCGGTAGCCTTCGTTGCTGCC
TCATTTGCTGTTGCATGCTGCTCCTGCTGCTGCTGCTGCTGTAAAGATGG
CGTGTTTCGCCGCAGGCGTCGGGTGCCGCTAAGTGTCCGCTGGCTGACGT
CCTTGTTGGTTGCTTCCTGTCGGTTCTGAATTCGATTCGAACATGGAATA
CTTCCGCGACCTTAGCGGTATAATCTTGTTGTGTCCTTTCTTGCCGCATA
GAGGTGGTACCACGCTACTTTCTCGATGTCCCGCAATTTCGTATTCGTGT
TGGGTGCACATGAACGTTCCTATCATCTGCGCTGTATCTCTGGCGTCACA
TTTGTTTGCTGTATCTCGGGTGATGTGAGGTGAACGTTCATCTCACGTAG
TGTATGCCTGTACCTCCACCTTTGTTGCTGTTGTCGTGTCTCGGGTGAAC
AGACCAGAAGGCCGTCGACGCCGCGACTAGGAACTGGAGGGACAACGTGA
CCGCCAACACCGAGGACGCGCCCAAGAAGACCGCCGCCATCTACGCTGAC
GACGCGCTGTTCTGGGGAACGGTCTCAGAGGAGGTCCGCAACACGCCCGC
GCACGTCTACGACTACTTTGTAAGTGGGAGTTTTGAGTTTTTTTTGTGAG
CAGCAGTAGGAATAACCATTGCGTGAGTTGGTGTGCGTTGTCTGTGTTTG
TGCTGGATACATGTAGCGTCATGGCGTCGATCGTTTTCTTGACCCGGTGA
TAATTCCTTCAATATTTTGTTCGTTGGCGGCCGGCCACCTCGGACAGGCA
GAGGAATGTTTGGTTACTGCACCGCTCGCTGCTAGCACAGCCACCAATCT
ACATGTTGATCCTCGGTTCCAAAACCCACCAAAATTTCCCTTGACACACC
CGCACAAGATTGTGAAACTCACGCTCCACTACCCACCTCTCAACCTTGCT
TTCCCTCCACACAGGACTTCTTTGCCCGCATGCCCAAGCTCTCCATGGTC
GCGTACGACCCGGCGCCCCCGCGCATCCACGGGGACTTCGCCATCCACGC
GGGCGCCTACACGTTCGCCTGGGCGGGAGCTGACGGGGCCATGACCGAGA
CGCGGGCGCGCTTCACTTTTGCGTATCGAAGGGAGAACGGGAAGTGGGTG
ATGGTCGAGCACCACTCCTCCGCGATGCCCAAGGCGCCCCCGGGCCTCAA
GCCGGTGAGTTGTGGAGTATTTGCAGGGGCCGTACATAGTAGAAGATGTG
TTCCTATTTTTATTCTTGCTAATGTGTATGTACTTCGCATTATACCATAA
CGAATCCATAGCCCTCTGCGGTCTTTTTTTCGTCACCACGCCGTTCTCGT
GAGTGGTTTCTCTCGCGCCCGATCGCACCATCCACCCAAACCCAACCGAT
CCCGAACGCGATGCCGTTTCCTACGTCGCGCAGGCCCAGCACTAATATGC
CTCAGGAGATGAAGACGCAGACAGACGTGAGTTCCTAGTGTAGGCATGGA
TGCGTTGTCCTCTCATGTTTTGTCTCGGAATTTCTTCTTGGGAACCTCTT
CTTGTGCCGTAGTTTAGTCGAGTCTCGCAAACTACCAAAAACTTGAAGGC
CCAGTTAGGGAACCGTACATCGGTCATCTGTGGCACAACCCTTGACGCTT
GTTGCCCCAAAGGAGAGGTTCTCTGGAGGGGACACTACTGCTGCACATCC
GATATGTTTTGGTGTCTCGCCGCCAGCGTATGAAATTCTCGCAAAAATCA
AAATAAATCGAACGAAGAACGGCCTTAGATTATTTCCCTTGTTGCCGACG
GCGACTGGGCATTAGAATAACAACTGAATCTCCCTTCTCCCCGATTTCCC
CGTTCGTGTACAAATGTATTATGTTTTTCTCTTTGTTTTGTGCGTGTCGC
GGTCTCAACTCAACAGGCGTTCACCCCTTGCAAGCAAGCACCTGGTCGAT
TGCGAATGGCGAGCGGGCGGGCAGCAGGCACAGGAGCTACCTCGAATCTC
GCAGACTTCTTGTTGCCTCATCGATGATGATGCCGGTTTGGCGATAGCTC
GTATTTACAATATACATAAAAGCAGGTCTGGAGCACCTGAACCTCTTTTG
ATGCGGATTTAATTGGAGAATATTCAGCACAGTGGGCGCTTGCGCTGATG
TGTTTTGAGATGGAGGGAGGGGTTTTGGGGGGTGAAAAGGGGTACAGCTG
TTGGTATATTCCAAGCTAGCACTCTGGCGGTTGGTTCCCAAGGTATCACC
CGCTGGCACTTGGGGCGAAGTGTTGTTTTTGGGGTAGCATGCGACCCCGA
CAAAAGGCCATCGACTGAACATTGTTGAGGTGGCGTGGCGCGCACCCCGC
CCCAAAAACGGCAGCGTGGGCAGGGTGTTTCGGGGGGAGATCGCTGTTGT
ACAGGTTATTGGCCGTGAATTGGGCGTCCCTGGTCAATTGTGGCTGATTC
GAGATCGTACATCGTATCAAGTACAAGCTGGTGTGCCTTGAGATACTTGG
GGTACACATTTAGCCTCGTTGGATTCATGTGCATAGATGCAGGTAGAGTG
TGTTGAGACGGTGTGTGATGAGAGGTAGCACCGTGTGGGATGTTGCTTCC
TGATGACCAATTATTTTTTAGACTACTATCTTGGCTTTCGTGGAATAGCA
TGGCATGTTGCACGTACGTTTGACGTACAGAACTACAAGTGCAAACCTCC
TGCGTCCCGTGCCTAGATGCCTAGAGTGTGATCCTCTTGCCCGCTTGTCG
TGCATCTGCTGTTCACCTGGTAAAAAAATGCAGCAGTGTCTGCGGGAGAA
TGGAAGAAAAAGAGAGCCGCACGCTCAATCAACCATCCCGTGAGTAGTTT
TGGATCCAGCCAGTACCATCCTGAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1339:720..4594-

>mRNA_E-siliculosus-1a_F_contig1339.2040.1 ID=mRNA_E-siliculosus-1a_F_contig1339.2040.1|Name=mRNA_E-siliculosus-1a_F_contig1339.2040.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1308bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1339:720..4594- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGAACTTTGGAAAGATGCCCGCGGGAAGGACGGCGTCCAGGCTGGC
AAGGGTCGTCGGCAAGAGCGAGTCCAGCATCCAGAGCAGCGTCCGGGCCG
CCGGCTCGATGAACGCTCTGCTGTCGACGAGGTCTGGCCTCACCGTCACC
CAGGCGGCGACCAGGCTTGCCGCCGTGAAGCTCCCGGTTAGGCACATGTC
TGGACAGATGATGAACTTTGGAAAGATGCCCGCGGGAAGGACGGCGTCCA
GGCTGGCAAGGGTCGTCGGCAAGAGCGAGTCCAGCATCCAGAGCAGCGTC
CGGGCCGCCGGCTCGATGAACGCTCTGCTGTCGACGAGGTCTGGCCTCAC
CGTCACCCAGGCGGCGACCAGGCTTGCCGCCGTGAAGCTCCCGGTTAGGC
ACATGTCTGGACAGGCCGACTACGCGGCCAACTACACCGCCGGCCGACTA
CGCGGCCAACTACACCGCCGACCAGAAGGCCGTCGACGCCGCGACTAGGA
ACTGGAGGGACAACGTGACCGCCAACACCGAGGACGCGCCCAAGAAGACC
GCCGCCATCTACGCTGACGACGCGCTGTTCTGGGGAACGGTCTCAGAGGA
GGTCCGCAACACGCCCGCGCACGTCTACGACTACTTTACCAGAAGGCCGT
CGACGCCGCGACTAGGAACTGGAGGGACAACGTGACCGCCAACACCGAGG
ACGCGCCCAAGAAGACCGCCGCCATCTACGCTGACGACGCGCTGTTCTGG
GGAACGGTCTCAGAGGAGGTCCGCAACACGCCCGCGCACGTCTACGACTA
CTTTGACTTCTTTGCCCGCATGCCCAAGCTCTCCATGGTCGCGTACGACC
CGGCGCCCCCGCGCATCCACGGGGACTTCGCCATCCACGCGGGCGCCTAC
ACGTTCGCCTGGGCGGGAGCTGACGGGGCCATGACCGAGACGCGGGCGCG
CTTCACTTTTGCGTATCGAAGGGAGAACGGGAAGTGGGTGATGGTCGAGC
ACCACTCCTCCGCGATGCCCAAGGCGCCCCCGGGCCTCAAGCCGGACTTC
TTTGCCCGCATGCCCAAGCTCTCCATGGTCGCGTACGACCCGGCGCCCCC
GCGCATCCACGGGGACTTCGCCATCCACGCGGGCGCCTACACGTTCGCCT
GGGCGGGAGCTGACGGGGCCATGACCGAGACGCGGGCGCGCTTCACTTTT
GCGTATCGAAGGGAGAACGGGAAGTGGGTGATGGTCGAGCACCACTCCTC
CGCGATGCCCAAGGCGCCCCCGGGCCTCAAGCCGGCCCAGCACTAAGCCC
AGCACTAA
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