prot_E-siliculosus-1a_F_contig1337.2034.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1337.2034.1
Unique Nameprot_E-siliculosus-1a_F_contig1337.2034.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1299
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1337.2034.1 vs. uniprot
Match: A0A6H5KMM5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM5_9PHAE)

HSP 1 Score: 1540 bits (3987), Expect = 0.000e+0
Identity = 1012/1365 (74.14%), Postives = 1031/1365 (75.53%), Query Frame = 0
Query:   73 MASEEDKSHAPNDGGAPVLDTSWIDDSAVLAVASXXXXXXXXXXXXXXXXXXXXXRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXXXXXXXXXSAELTILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTPAARPSPLGTLNNNETKPSSSSAPKKKSEGKQEPLGQASSAAVARGRRIRRATFGGADARIHLEAENLAPVLPSKPPNPVPAAPAPTATRSPRAMDGEVVGAAEEHASGLSIAAGAAATGPGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSIVMPCEAQPLMDSDLGDGHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRRSTSTTNSQADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRRRLFRAFYGAAPGSQRARRVAARLFCLTGYVLSAVAPEDARVLCEAAGDSMEWGLEEDEPRLVSQPVRRESKEQKRGLVLRIK---PLFDLMDKASKDEKLKAESATGFVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRIREFAAARXXXXXXXXXXXXXXXS--ACPETAVDGMMPGVEKRVSSSVKGTAISVACTSPTRAEAARKSRRDGEGLVADPATDTLAAASGVTVGESHTEKESLPPGAAXXXXXXXXXXXXXXXXXXXXXXXAXXXXEARDDVSGGEEADVLAMTEGIAQEVSPEA--EPPRTTTPGEGGGVGATAAVATNAAAIETLVPSNEAAVVDGAGEEEAMPEAL-------------------------------------------------------------------------------------------------------------------------------------GRDGAPLAACGNRVGSVSERVEEAVSAYSPRRGGQTPRISAIGNPTSRNGGGSSARVLDPSSSPPGGSGASSPFVEQGQHEESLSGGTPGPGGTAWKASPFAVGGPFSAAAYGAGAPTVPPGGGVAVSPGQDDEEGAEEIAALEERLWAVVDAALREYHDGVALVRSRRNQHAVATAAAASDAEKNSSALSCVPGAGXXXXXXXAAQVGETAASMTSSGLGPEEEAYASGLPAKAAPAATTPLTDDVDRTRAVAATAAATVDIDGQPTPDSPLLPLLQLRLSEEEDDERFEYSLAWGXXXXXXXXXXXXXXS-QARGGKPRRRSLAKAFSSHKTRKEPRVPEGVGARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNACDTVMKPCQHSACGVCVDKLRGQAEQSGQALSCPWDRRGVDGICPLQE 1296
            MASEEDKS+APN GGAPVLDTSWIDDSAV+AVA                      RTLSPSIGKHNYMSNVDLNDPMKYPSLPSSG  XXXXX                   AE+TILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTT A+RPSPLGTLNNNETKPSSSSAPKKKSEGKQ+PLGQASSAAVARGRR RRATFGGADARI LEAENLAPVLPSKPPNPVPAA APTATRSPR MDGEVVGA EE ASGLS A  AAAT PGD        XXXXXXXXXXXXXXXXXXXX      RSIVMPCEAQPLMDSDLG+ HA         XXXXXXXXXXXXXXXXXXXXXXXXXXPS+ STSTTNS ADELPLSSINVVSCLSRPLAAQRGWPVGDEDTR+RLFRAFYGAAPGSQRARRVAARLFCLTGY LSAVAPEDARVLCEAAGDSMEWGLE DEPRLVSQPVRRESKEQKRGLVLRIK   PLFDLMDKASKDEKLKAESATG VSRKAAPDGFCYEDRETGEPVEPGAYK PYLRHVRDVRASR+REFAAA XXXXXXXXXXXXXXX   AC ETAVDGMMPGVEKR SSSVKGTAISVAC SPTRAEAA KSRR+GEGLVADPATD  AAAS VTVGE    KESLPPGAA                       A    EARDDVSGGEEADVL +TEG  QE SPEA  E PRT T GE   VG TAAVA NAAAIETLV SNEAAVVDGAGEE+AM EAL                                                                                                                                     GRDGAPLAACGNRV S+SERVEEAVSAYSPRRGGQTP ISA  NPTSRNGGGSS RVL P SSPPG  GASSPFVEQGQHEESL GGTPGPGGTAWKAS F VG PFSAAAYGAGAPTVPP GGVAVSPGQDDE GAEEIAALEERLWAVVDAALREYHDGVALVRSRRN HA ATA AAS+ E+NS+ALSCVP AG       AAQVGETAAS TSSGLG EEEAYASGLPAKAAP  TTPLT DVDRTRAVAA AAATV+ DGQPTPDSPLLPLLQLRLSEEEDDERFEYSLAWG    XXXXXXXXXX  +ARGGKPRRRSLAKAFSSHKTRKEP+V EG GAR AAQ AG ESEARGDGVGGGKTT LTC     NACDTVMKPCQHSAC VCVDKLR Q EQSGQALSCPWDRRGVD ICPLQE
Sbjct:    1 MASEEDKSNAPNGGGAPVLDTSWIDDSAVVAVA-YGGDSGGVTRGRGGGKRRTRRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGGDXXXXXNHQKSRSPSSHDQEFGGGLAEVTILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTLASRPSPLGTLNNNETKPSSSSAPKKKSEGKQDPLGQASSAAVARGRRSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAARAPTATRSPRTMDGEVVGAVEEQASGLSTAIAAAATRPGDGEETQKRVXXXXXXXXXXXXXXXXXXXX------RSIVMPCEAQPLMDSDLGEDHAEAETPNMPPXXXXXXXXXXXXXXXXXXXXXXXXXXPSQGSTSTTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEAAGDSMEWGLEGDEPRLVSQPVRRESKEQKRGLVLRIKVGDPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKVPYLRHVRDVRASRVREFAAAXXXXXXXXXXXXXXXXXXXACRETAVDGMMPGVEKRASSSVKGTAISVACISPTRAEAASKSRRNGEGLVADPATDAFAAASRVTVGELAAAKESLPPGAASWGVDNNGDTPSKKIDGGGAVV-AIGEGEARDDVSGGEEADVLTITEGTTQEASPEAAAETPRTVTSGERLYVGVTAAVAKNAAAIETLVSSNEAAVVDGAGEEKAMAEALVRGEVQEVEDLEVWKDMTAPVVAGGGVETIRESAAGEVNLDSSPSSHGTPEAVVPHPLSARLREPHGDSGLETAAIHPPFSHGVPETHGVFVPEESSASRVPETSTPRVLATHGVVSPTTTSSVNAGSSGDEQGRDGAPLAACGNRVDSISERVEEAVSAYSPRRGGQTPMISATANPTSRNGGGSSVRVLGPPSSPPGSGGASSPFVEQGQHEESLGGGTPGPGGTAWKASHFGVGSPFSAAAYGAGAPTVPPAGGVAVSPGQDDE-GAEEIAALEERLWAVVDAALREYHDGVALVRSRRNHHAFATAGAASETEENSTALSCVPDAGAAATPPPAAQVGETAASRTSSGLGLEEEAYASGLPAKAAPVDTTPLTGDVDRTRAVAAPAAATVEHDGQPTPDSPLLPLLQLRLSEEEDDERFEYSLAWGGAGAXXXXXXXXXXXXKARGGKPRRRSLAKAFSSHKTRKEPKVHEGAGARSAAQVAGIESEARGDGVGGGKTTRLTCXXXXXNACDTVMKPCQHSACSVCVDKLRSQGEQSGQALSCPWDRRGVDEICPLQE 1356          
BLAST of mRNA_E-siliculosus-1a_F_contig1337.2034.1 vs. uniprot
Match: D8LM31_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM31_ECTSI)

HSP 1 Score: 1272 bits (3291), Expect = 0.000e+0
Identity = 904/1230 (73.50%), Postives = 918/1230 (74.63%), Query Frame = 0
Query:   73 MASEEDKSHAPNDGGAPVLDTSWIDDSAVLAVASXXXXXXXXXXXXXXXXXXXXXRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXXXXXXXXXSAELTILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTPAARPSPLGTLNNNETKPSSSSAPKKKSEGKQEPLGQASSAAVARGRRIRRATFGGADARIHLEAENLAPVLPSKPPNPVPAAPAPTATRSPRAMDGEVVGAAEEHASGLSIAAGAAATGPGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSIVMPCEAQPLMDSDLGDGHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PSRRSTSTTNSQADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRRRLFRAFYGAAPGSQRARRVAARLFCLTGYVLSAVAPEDARVLCEAAGDSMEWGLEEDEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGFVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRIREFAAARXXXXXXXXXXXXXXXSACPETAVDGMMPGVEKRVSSSVKGTAISVACTSPTRAEAARKSRRDGEGLVADPATDTLAAASGVTVGESHTEKESLPPGAAXXXXXXXXXXXXXXXXXXXXXXXAXXXXEARDDVSGGEEADVLAMTEGIAQEVSPEA--EPPRTTTPGEGGGVGATAAVATNAAAIETLVPSNEAAVVDGAGEEEAMPEALGRDGAPLAACGNRVGSVSERVEEAVSAYSPRRGGQTPRISAIGNPTSRNGGGSSARVLDPSSSPPGGSGASSPFVEQGQHEESLSGGTPGPGGTAWKASPFAVGGPFSAAAYGAGAPTVPPGGGVAVSPGQDDEEGAEEIAALEERLWAVVDAALREYHDGVALVRSRRNQHAVATAAAASDAEKNSSALSCVPGAGXXXXXXXAAQVGETAASMTSSGLGPEEEAYASGLPAKAAPAATTPLTDDVDRTRAVAATAAATVDIDGQPTPDSPLLPLLQLRLSEEEDDERFEYSLAWGXXXXXXXXXXXXXXSQARGGKPRRRSLAKAFSSHKTRKEPRVPEGVGARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNACDTVMKPCQHSACGVCVDKLRGQAEQSGQALSCPWDRRGVDGICPLQEKN 1298
            MASEEDK HAPN GG  VLDTSWID+SAV+AV  XXXXXXXXXXXXXXXXXXX  RTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXXXXXXXXX  ELTILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTPA RPSPLGTLNNNETKPSSSSAPKKKSEGKQEP GQASSAAVARGR  RRATFGGADARI LEAENLAPVLPSKPPNPVPAAPAPTATRSPRAMDGEVVGAAEE ASGLS AA A  T PGD         XXXXXXXXXXXXXXXXXXX      RSIVMPCEAQPLMDSDLGDGHA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PSR +TSTTNS ADELPLSSINVVSCLSRPLAAQRGWPVGDEDTR+RLFRAFYGAAPGSQRARRVAARLFCLTGY LSAVAPEDARVLCE AGDSMEWGLE DEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATG VSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASR+REFAAARXXXXXXXXXXXXXXX ACPETAVDGMMPGVEK  SSSVKGTAISVACTSPTRAEAA KSRRDGEGLVADPATD   AASGVTV ES TEKESL PGAA                       A    EARDD SG EEADVLAMT+GI QE SPEA  E PRT TPGEGGGVG TAAVATNAA IETLVPS+EAAVVDGAG+EEAM EALGR                                           T++                                                                                                                                                              +VGE AASMTSSGLGP+E+AYASGLPAKAAPAATTPLTDDV RTRAVAA AAATVD DGQPTPDSPLLPLLQLRLSEEEDDERFEYSLAWG      XXXXXXXX QA GGK RRRSLAKAFSSHKTRKEP+  EGVGARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNACDTVMKPCQHSACGVCVDKLRGQAEQSGQALSCPWDRRGVD I PLQEKN
Sbjct:    1 MASEEDKRHAPNGGGTLVLDTSWIDNSAVVAVXXXXXXXXXXXXXXXXXXXXXR-RTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXELTILRPPPQRDTDAAVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTPAPRPSPLGTLNNNETKPSSSSAPKKKSEGKQEPRGQASSAAVARGRLSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAAPAPTATRSPRAMDGEVVGAAEEQASGLSTAAAAPVTRPGDGEETQERVPXXXXXXXXXXXXXXXXXXX------RSIVMPCEAQPLMDSDLGDGHAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSRGNTSTTNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEVAGDSMEWGLEGDEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAARXXXXXXXXXXXXXXX-ACPETAVDGMMPGVEKSASSSVKGTAISVACTSPTRAEAASKSRRDGEGLVADPATDAFPAASGVTVEESPTEKESLLPGAALGGGVDNNGDTPSKKIDGGGAVVAVEEGEARDDASGAEEADVLAMTDGITQETSPEAAAETPRTITPGEGGGVGTTAAVATNAAEIETLVPSDEAAVVDGAGQEEAMAEALGR-------------------------------------------TTK--------------------------------------------------------------------------------------------------------------------------------------------------------------KVGEIAASMTSSGLGPKEDAYASGLPAKAAPAATTPLTDDVGRTRAVAAPAAATVDTDGQPTPDSPLLPLLQLRLSEEEDDERFEYSLAWGAGAEAGXXXXXXXXXQA-GGKARRRSLAKAFSSHKTRKEPKAHEGVGARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNACDTVMKPCQHSACGVCVDKLRGQAEQSGQALSCPWDRRGVDEIRPLQEKN 1020          
BLAST of mRNA_E-siliculosus-1a_F_contig1337.2034.1 vs. uniprot
Match: A0A835Z9P5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P5_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.230e-14
Identity = 66/168 (39.29%), Postives = 92/168 (54.76%), Query Frame = 0
Query:  507 RRLFRAFYGAAPGSQRARRVAARLFCLTGYVLSAVAPEDARVLCEAAGD--------SMEWGLE--EDEP------RLVSQP--VRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGFVSRKAAPDG-FCYEDR-ETGEPVEPGAYKGPYLRHVRDVRASRI 654
            R L R +  A PG QRARR+AAR++CL+GY LSAVA  DA +LC A           +++W  +   D+P      RL + P  +R  S  QKR LVLR++P+ + M+ +   E+   E+ATG    +A  DG + Y D    G  V P  Y   YL+H+  VRA R+
Sbjct:  326 RALCREYAAATPGGQRARRIAARVYCLSGYPLSAVAATDAELLCAARXXXXXXXXXAALDWPTDPRRDDPAAPPLPRLDALPAAMRGASNAQKRALVLRLRPVLERMEASGSVERAALEAATGLACERA--DGMYRYRDGGRAGRIVAPALYAERYLQHLAAVRAERL 491          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1337.2034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KMM5_9PHAE0.000e+074.14RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LM31_ECTSI0.000e+073.50RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z9P5_9STRA1.230e-1439.29RING-type domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1224..1291
e-value: 2.4E-5
score: 25.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 1241..1285
score: 9.598
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1235..1289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1337contigE-siliculosus-1a_F_contig1337:12553..18143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1337.2034.1mRNA_E-siliculosus-1a_F_contig1337.2034.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1337 12553..18143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1337.2034.1 ID=prot_E-siliculosus-1a_F_contig1337.2034.1|Name=mRNA_E-siliculosus-1a_F_contig1337.2034.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1299bp
MRRDLRTGVAFLRQKTPRYSTVGHFHHNQCEERLRVSTGCLTPEVCKNST
GVSTQKLVPPVEEASHSQGYICMASEEDKSHAPNDGGAPVLDTSWIDDSA
VLAVASGGGSGGVARGRGGGGKRRTRRRTLSPSIGKHNYMSNVDLNDPMK
YPSLPSSGGDDGGSSNRQKSGSPSSHDQEIGGGSAELTILRPPPQRDTDA
AVTSPGADSAAAISVPASPSGSTASPDTDLPDPTAVADLFEAEEGTTPAA
RPSPLGTLNNNETKPSSSSAPKKKSEGKQEPLGQASSAAVARGRRIRRAT
FGGADARIHLEAENLAPVLPSKPPNPVPAAPAPTATRSPRAMDGEVVGAA
EEHASGLSIAAGAAATGPGDGEETQERVPPPPPPPPPPPPAAAIKKSRSR
SSRRRSIVMPCEAQPLMDSDLGDGHAEAETANMPPPPPVPPATGGYVTAT
AAAAPADGDGKPSRRSTSTTNSQADELPLSSINVVSCLSRPLAAQRGWPV
GDEDTRRRLFRAFYGAAPGSQRARRVAARLFCLTGYVLSAVAPEDARVLC
EAAGDSMEWGLEEDEPRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASK
DEKLKAESATGFVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVR
ASRIREFAAARRVVAAAAPAAVASSSSACPETAVDGMMPGVEKRVSSSVK
GTAISVACTSPTRAEAARKSRRDGEGLVADPATDTLAAASGVTVGESHTE
KESLPPGAASGGGVDNNGDTPSKKIDGGGAVVAIGGGEARDDVSGGEEAD
VLAMTEGIAQEVSPEAEPPRTTTPGEGGGVGATAAVATNAAAIETLVPSN
EAAVVDGAGEEEAMPEALGRDGAPLAACGNRVGSVSERVEEAVSAYSPRR
GGQTPRISAIGNPTSRNGGGSSARVLDPSSSPPGGSGASSPFVEQGQHEE
SLSGGTPGPGGTAWKASPFAVGGPFSAAAYGAGAPTVPPGGGVAVSPGQD
DEEGAEEIAALEERLWAVVDAALREYHDGVALVRSRRNQHAVATAAAASD
AEKNSSALSCVPGAGAATTPPPAAQVGETAASMTSSGLGPEEEAYASGLP
AKAAPAATTPLTDDVDRTRAVAATAAATVDIDGQPTPDSPLLPLLQLRLS
EEEDDERFEYSLAWGGAGAEAGGGGGGGSSQARGGKPRRRSLAKAFSSHK
TRKEPRVPEGVGARPAAQAAGNESEARGDGVGGGKTTTLTCRLCCRNACD
TVMKPCQHSACGVCVDKLRGQAEQSGQALSCPWDRRGVDGICPLQEKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD