prot_E-siliculosus-1a_F_contig1333.2016.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1333.2016.1
Unique Nameprot_E-siliculosus-1a_F_contig1333.2016.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length193
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: D7G674_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G674_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 3.910e-117
Identity = 167/188 (88.83%), Postives = 177/188 (94.15%), Query Frame = 0
Query:    6 GIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 193
            GIVTPQDNTIQLAVRESVSDQYSVLTASVFKGK+LG+VPFDN DTLMQELRNF+ VKGGATTPTRR AQVKGSSGGRQGQ+R+GGGGTGSGGTN FRSASPGR DGGYGGRRVMTV++++ EDECAEF+RVYDIH SPRTNSQ  DCPFF WFTSVEEKDRHRRAFGSRCL CGSEGHFVRDCDKGYI
Sbjct:   63 GIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKQLGLVPFDNIDTLMQELRNFEAVKGGATTPTRRSAQVKGSSGGRQGQKRDGGGGTGSGGTNTFRSASPGRLDGGYGGRRVMTVDEVDCEDECAEFQRVYDIHVSPRTNSQMKDCPFFAWFTSVEEKDRHRRAFGSRCLKCGSEGHFVRDCDKGYI 250          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5KBL4_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBL4_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.930e-109
Identity = 168/188 (89.36%), Postives = 173/188 (92.02%), Query Frame = 0
Query:    6 GIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 193
            G+VTPQDNTIQLAVRESVSDQYSVLTASVFKGKE GVVPFDN DTLM ELRNF+ VKGGATTPTR MAQVK SSG RQGQR  GGG TGSGGTN FRSASPGRSDGGYGGR VMTVEDM+YEDECAEFKRVYDIHA+PRTNSQA DCPFF WFTSVEEKDRHR+AFG RCLNCGSEGHFVRDCDKGYI
Sbjct:  321 GVVTPQDNTIQLAVRESVSDQYSVLTASVFKGKEKGVVPFDNIDTLMHELRNFEAVKGGATTPTRMMAQVKSSSGWRQGQRGCGGGRTGSGGTNTFRSASPGRSDGGYGGR-VMTVEDMDYEDECAEFKRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRQAFGLRCLNCGSEGHFVRDCDKGYI 507          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5KRF6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF6_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 1.070e-107
Identity = 166/193 (86.01%), Postives = 172/193 (89.12%), Query Frame = 0
Query:    6 GIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNA-----FRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 193
            G+VTPQDNTIQLAVRESVSDQYSVLTAS+FKGKEL VV FDN DTLM ELRNF+ VKGGATTPTRRMAQVK SSG RQGQR  GGG TGSGGTN       RSASPGRSDGGYGGR VMTVEDM+YEDECAEF+RVYDIHA+PRTNSQA DCPFF WFTSVEEKDRHRRAFG RCLNCGSEGHFVRDCDKGYI
Sbjct:  117 GVVTPQDNTIQLAVRESVSDQYSVLTASMFKGKELCVVAFDNIDTLMHELRNFEAVKGGATTPTRRMAQVKSSSGWRQGQRGGGGGRTGSGGTNTRVMTGXRSASPGRSDGGYGGR-VMTVEDMDYEDECAEFQRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRRAFGLRCLNCGSEGHFVRDCDKGYI 308          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5K0Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q4_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 1.520e-94
Identity = 149/187 (79.68%), Postives = 154/187 (82.35%), Query Frame = 0
Query:    7 IVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 193
            +VTPQDNTIQLAVRE VSDQYSVLTASV KGKELGVV FDN                    PTRRMAQVKGSSGGRQGQR +GGG TGSGG N FRSASPGRSDGGYGGRRVMTVEDM+YED+C EFKRVY IH+SPRTNSQ NDCPFF WFTSVEEKDRHRRAFGSRCLNCGSEG FVRDC KGYI
Sbjct:   87 LVTPQDNTIQLAVREIVSDQYSVLTASVCKGKELGVVQFDNX-------------------PTRRMAQVKGSSGGRQGQRCDGGGRTGSGGGNTFRSASPGRSDGGYGGRRVMTVEDMDYEDKCEEFKRVYGIHSSPRTNSQVNDCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGQFVRDCVKGYI 254          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5K255_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K255_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 9.600e-63
Identity = 122/187 (65.24%), Postives = 126/187 (67.38%), Query Frame = 0
Query:    7 IVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 193
            IVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELG              RNF  VKGG                                    FRSASPGRSDGGYGGR VMTVEDM+YEDECAEFKRVYDIHA+PRTNSQA DCPFF WFTSVEEKDRHRRAFG  CLNCGSEGHFVR   +G +
Sbjct:  516 IVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELG--------------RNFKAVKGGGKDSDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRSASPGRSDGGYGGR-VMTVEDMDYEDECAEFKRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRRAFGLTCLNCGSEGHFVRIVIRGTL 687          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5K8R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R6_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 9.810e-37
Identity = 75/90 (83.33%), Postives = 82/90 (91.11%), Query Frame = 0
Query:    6 GIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGS 95
            GIVTPQDNTIQLAV ESVSDQ SVLTA VF+GKELGVV FD+ DTLM E+R+F+ V+GGATTPTRRMAQVKGSSGGRQGQRR+GGG TGS
Sbjct:  232 GIVTPQDNTIQLAVGESVSDQDSVLTACVFRGKELGVVTFDHIDTLMHEVRSFEAVEGGATTPTRRMAQVKGSSGGRQGQRRDGGGRTGS 321          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5K1N6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N6_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 4.960e-25
Identity = 79/195 (40.51%), Postives = 107/195 (54.87%), Query Frame = 0
Query:    6 GIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSA-SPGRSDGGYG-----GRRVMTVEDMEYEDECAEFKRVYDIHAS-PRTNSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI 193
            G  + QDN +QLAVR+SV DQYS +   VFKG++L  VP+D+   LM  L         AT   R +  V+     R GQ    GGG  S GT ++ SA S GR    YG     G RVM + + E EDE  EFK+V+ +     +     +  PF+T F S +E+D  R+A+G +CLNCG + HFVR+C   +I
Sbjct:  617 GHESAQDNVLQLAVRDSVCDQYSNIAVDVFKGRDLMAVPYDSIRDLMDALEVLAWNTTEATAVKRNVISVQTK---RAGQ----GGGNASAGTTSYASAASAGRM---YGKQPSQGARVMNIHE-EMEDEEKEFKKVHYVATQWEKGKGDESYIPFYTRFDSRKEQDEARQAYGLKCLNCGDQSHFVRECTHPFI 800          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5KNG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 5.570e-19
Identity = 72/194 (37.11%), Postives = 102/194 (52.58%), Query Frame = 0
Query:   11 QDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDTLMQELRNFDVVKGGATTPT-------------RRMAQVKGSSGGRQGQRREGGGGTGSGGTNAFRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRT-NSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEG--HFVRDC 188
            +D T+Q+AV+  V+DQY+ LTA VF G+    +P+D+ ++LM+ L   D +    TT T             R  A +  SS GR G     GGG+ SG  +   S +P    G  G R VMTV   +Y+DE  EF +V  +    +      +D PF+  FT+ +E+DR RR FG +CLNCG E   H  R+C
Sbjct:  155 EDGTLQVAVKAGVTDQYATLTAPVFHGRNTQALPYDSLESLMEAL---DDMTDNTTTATASVRLRGVGSVLPRGQADMSVSSRGRYG-----GGGSFSGAKSG--SLTP---QGSAGARAVMTV--AQYDDESREFWQVSQVSRGNKGFGRNDDDPPFYVQFTNNKERDRARREFGPKCLNCGVEEPFHLAREC 333          
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Match: A0A6H5JHS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHS6_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.250e-6
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0
Query:  119 MTVEDMEYEDECAEFKRVYDIHASPRT-NSQANDCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEG--HFVRDC 188
            MTV   +Y+DE  EF +V  +    +      +D PF+  FT+ +E+DR RR FG +CLNCG E   H  R+C
Sbjct:    1 MTV--AQYDDESREFWQVSQVSRGNKGFGLNDDDPPFYVQFTNNQERDRARREFGPKCLNCGVEEPFHLAREC 71          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1333.2016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G674_ECTSI3.910e-11788.83CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBL4_9PHAE1.930e-10989.36CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KRF6_9PHAE1.070e-10786.01CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0Q4_9PHAE1.520e-9479.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K255_9PHAE9.600e-6365.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8R6_9PHAE9.810e-3783.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1N6_9PHAE4.960e-2540.51CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KNG1_9PHAE5.570e-1937.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHS6_9PHAE1.250e-641.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 174..190
e-value: 5.2E-4
score: 29.3
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 174..190
e-value: 1.2E-5
score: 25.1
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 174..190
score: 9.999
NoneNo IPR availableGENE3D4.10.60.10coord: 143..191
e-value: 1.2E-5
score: 27.2
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 163..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1333contigE-siliculosus-1a_F_contig1333:30375..30953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1333.2016.1mRNA_E-siliculosus-1a_F_contig1333.2016.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1333 30375..31857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1333.2016.1 ID=prot_E-siliculosus-1a_F_contig1333.2016.1|Name=mRNA_E-siliculosus-1a_F_contig1333.2016.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=193bp
MFGTWGIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGVVPFDNTDT
LMQELRNFDVVKGGATTPTRRMAQVKGSSGGRQGQRREGGGGTGSGGTNA
FRSASPGRSDGGYGGRRVMTVEDMEYEDECAEFKRVYDIHASPRTNSQAN
DCPFFTWFTSVEEKDRHRRAFGSRCLNCGSEGHFVRDCDKGYI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf
IPR001878Znf_CCHC