mRNA_E-siliculosus-1a_F_contig133.1991.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig133.1991.1 vs. uniprot
Match: D7FRI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI7_ECTSI) HSP 1 Score: 252 bits (643), Expect = 1.040e-74 Identity = 220/351 (62.68%), Postives = 226/351 (64.39%), Query Frame = 1
Query: 994 ISEVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASGSVTGFGPNMTTDGDDNTVAASYWSCQAPTGTSSSSFGYESSFDYDSCWLYFELNDEYTASYMMLYVHESNDATKEPIQFDVYGCTIDAFSCYNEYANELVGSSTTVPGTPLGEGERVNLIRPAVVSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSWRNGDDSDDDYVWANXXXXXXXXXXXXXXXXXXXXXXXXTASDRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAIGLPSSTADDADXXXXXXXXXXXEDFGNGALARGGVCSRQGLVGAVAVGAMFILFAANAM 2046
+S+VEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSAS SV GFGPNMTT YA+ELVGSSTTVPGTPLGEGERVNLIRP VSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSW NGDDSD XXXXXXXXXXXXXXXXXXXXXXXXTA+D G XXXXXXXXXXXXXXXXXXXXXXXXXX DDAD ++FGNGALARGGVCSRQGLVG VAVGAMFI FAANAM
Sbjct: 45 LSQVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASWSVAGFGPNMTT-----------------------------------------------------------------------------------YADELVGSSTTVPGTPLGEGERVNLIRPLTVSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSWMNGDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATDEAGGVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDADDAADI------DNFGNGALARGGVCSRQGLVGVVAVGAMFISFAANAM 306
BLAST of mRNA_E-siliculosus-1a_F_contig133.1991.1 vs. uniprot
Match: D7FRI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI8_ECTSI) HSP 1 Score: 167 bits (423), Expect = 6.470e-45 Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 1
Query: 232 FHESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVNMPPDTSGNYLYLLFDLTSDQTIDVSEVEIYLDVDDPEDVVVATLPTIST 501
FHESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVNMPPD SGNYL+LLFDLTSDQ IDVSEVEIYLDVDDP+DVVVATLPTIST
Sbjct: 61 FHESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVNMPPDASGNYLHLLFDLTSDQAIDVSEVEIYLDVDDPDDVVVATLPTIST 150
BLAST of mRNA_E-siliculosus-1a_F_contig133.1991.1 vs. uniprot
Match: A0A6H5L2E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E1_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.470e-37 Identity = 93/176 (52.84%), Postives = 98/176 (55.68%), Query Frame = 1
Query: 103 LTRDGEDNSVAESRWSCTLGTTTTCELQFEFDDYFDVSYLIIYF-------------------------------------------HESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVNMPPDTSGNYLYLLFDLTSDQTIDVSEVEIYLDVDDPEDVVVATLPTIST 501
LT+DG DNSVAESRWSCTLGT TTCELQ EFDD FDVSYL+I F HESDDATQLS SFDV+VGY TVHTDLTSPGTALGAGQRV EIYLDVDDP++VVVATLPTIST
Sbjct: 8 LTQDGADNSVAESRWSCTLGTATTCELQIEFDDCFDVSYLMISFKNTAGVGARPPTPCPVKTETVLRFAANETTRSVRLPSVDPLDFHESDDATQLSNSFDVQVGYGTVHTDLTSPGTALGAGQRV----------------------------EIYLDVDDPDNVVVATLPTIST 155 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig133.1991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig133.1991.1 >prot_E-siliculosus-1a_F_contig133.1991.1 ID=prot_E-siliculosus-1a_F_contig133.1991.1|Name=mRNA_E-siliculosus-1a_F_contig133.1991.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=683bp VEAANVTNVVVDATAWDLRLGSEGGCGLTGCDPRLTRDGEDNSVAESRWSback to top mRNA from alignment at E-siliculosus-1a_F_contig133:9692..15439+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig133.1991.1 ID=mRNA_E-siliculosus-1a_F_contig133.1991.1|Name=mRNA_E-siliculosus-1a_F_contig133.1991.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5748bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig133:9692..15439+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig133:9692..15439+ >mRNA_E-siliculosus-1a_F_contig133.1991.1 ID=mRNA_E-siliculosus-1a_F_contig133.1991.1|Name=mRNA_E-siliculosus-1a_F_contig133.1991.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4098bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig133:9692..15439+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |