mRNA_E-siliculosus-1a_F_contig1302.1845.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1302.1845.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1302.1845.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 3.000e-86
Identity = 149/220 (67.73%), Postives = 160/220 (72.73%), Query Frame = 1

Query:    1 GAPLPLSCHTAASTESKAGGTAPNLRQRPIGRSGRPHTGLHRLLLSTDRPSQERLHCDRRRAVAMASTEGGSKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEVCTSNRVPAVQAFGWTWELPMNRVPQRAATELQPGPERRRQNGHSCAAGAGSVVWPENLKRLEYCSDIPMTTISW 660
            GAPL  SCHTA STES+AGGTAPNLRQRPIGRSGR    L     S        L   ++  VAMA+TEGG   LD  IV LNQACD QEKRWY STLELQLVSLELCGACR AQLLHV V EDTP TLWSS TS T PSQRSPEVCTSNRVPAVQA  WTW LPM+R+PQRAA E QP  ERR Q+GHS AA   SVVWPE+LKRL +   +P   + W
Sbjct:   17 GAPLSPSCHTATSTESEAGGTAPNLRQRPIGRSGRG-ASLPASRHSWTLARTPTLRSKKKIIVAMANTEGGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVFSRRMPGKAVWW 235

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 1.400e-58
Identity = 107/174 (61.49%), Postives = 126/174 (72.41%), Query Frame = 1

Query:  199 STEGGSKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEVCTSNRVPAVQAFGWTWELPMNRVPQRAATELQPGPERRRQNGHSCAAGAGSVVWPENLKRLEYCSDIPMTTISWPASLRQLCLFNSFNQAIADV 720
            +T+G SKCLDAF+V LNQACD QEKRWY STLELQLVSLE+CGACRR Q LHVRV   TP +LW    +HT  + RSP+VC S+RVP VQAFG TW LPM  + QR+ATE++ G   RR N HS AA   S VWP+ LKR+ + SD+ + T SWPASL+QL     FNQAI  V
Sbjct:    2 TTKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQAIVGV 175

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 6.630e-49
Identity = 97/167 (58.08%), Postives = 114/167 (68.26%), Query Frame = 1

Query:  208 GGSKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEVCTSNRVPAVQAFGWTWELPMNRVPQRAATELQPGPERRRQNGHSCAAGAGSVVWPEN-LKRLEYCSDIPMTTISWPASLRQLCLFNSFNQ 705
            G S+CL AFIV LNQ C+ QEKRWYASTLELQLVSLE CGACRR   LHVRVD  TP +LWS   SH    +RS E C SNRVPAVQA G TW L M  + Q +A EL+   + RR +G+S  A  GS+ W +  LKRL + SD+P +T SWPASL QL   + F+Q
Sbjct:   13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWPASLPQLLFGDRFDQ 179

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 7.340e-40
Identity = 85/168 (50.60%), Postives = 105/168 (62.50%), Query Frame = 1

Query:  208 GGSKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEVCTSNRVPAVQAFGWTWELPMNRVPQRAATELQPGPERRRQNGHSCAAGAGSVVWPENLKRLEYCSDIPMTTISWPASLRQLCLFNSFNQAI 711
            G S+CLDAFIV L QA D + KRWY STLELQLVSLE CGACR A    V++   TP +LWS   SH    +RS E C  +RVPAVQA GW W LPM  +  R+ATEL    E R+  G S A   G + W + L RL + S+  + ++SWPA L++L   + FNQ I
Sbjct:   25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPI 192

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.500e-33
Identity = 80/172 (46.51%), Postives = 101/172 (58.72%), Query Frame = 1

Query:  199 STEGGSKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEVCTSNRVPAVQAFGWTWELPMNRVPQRAATELQPGPERRRQNGHSCAAGAGSVVWPENLKRLEY-CSD--IPMTTISWPASLRQLCLFNSFNQ 705
            ++E   +CLDAF+V L+Q  +  EKRWY STL+LQL SLE CGACR   +LHV VD +TP TLWS G       Q +P   TS RVPAVQA G TW  P       A++EL    E  +     C A   SVVWP+ L+RL   C+   IP+  +SWP+SL+ L     F+Q
Sbjct:    2 TSEAQRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLG-------QANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 5.240e-33
Identity = 73/150 (48.67%), Postives = 91/150 (60.67%), Query Frame = 1

Query:  202 TEGGSKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEVCTSNRVPAVQAFGWTWELPMNRVPQRAATELQPGPERRRQNGHSCAAGAGSVVWPENLKRLEYCSD--IPM 645
            TEG ++  DAF + L+QAC+  EKRWY ST ELQL SL++C ACR    LHVRV   TP++LWS  T   +P+ +S +V   +RVP V+A   TW   M  + QRAA EL    ER    G  CAA  GSVVWP  L +L   +D  IPM
Sbjct:    3 TEGYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPM 152

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 7.140e-33
Identity = 78/153 (50.98%), Postives = 99/153 (64.71%), Query Frame = 1

Query:  205 EGGSKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEVCTSNRVPAVQAFGWTWELPMNRVPQRAATELQPGPERRRQNGHSCAAGAGS-VVWPENLKRLEYC--SDIPMTTI 654
            E  ++CLDAF++ L+QAC+  EKRWYASTLELQL SL+LC ACR   +LHV VD+ TP +LWSS T+ T P+ RS  +  S+RVP V+A   TW L M  + ++AA EL    ER    G SC +  GS VVWP  L +L     SDI M T+
Sbjct:    6 EWRTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGTV 158

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 7.550e-30
Identity = 77/168 (45.83%), Postives = 94/168 (55.95%), Query Frame = 1

Query:  208 GGSKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWS--SGTSHTIPSQRSPEVCTSNRVPAVQAFGWTWELPMNRVPQRAATELQPGPERRRQNGHSCAAGAGSVVWPENLKRLEYCSDIPMTTISWPASLRQLCLFNSFNQ 705
            G  +C+DAFIV LN+ CD  E+RWYASTLELQ VSLE C ACRR    H      + ST+    SG S               R P V+A+  TW L M+ + Q  A ELQ G + RR  GHS AA   S++W + LKRL    D P+ T SWPASL+QL     FN+
Sbjct:   15 GRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPTSH------STSTVGRLVSGVS---------------RAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVLELDTPVITASWPASLQQLSFGYKFNK 161

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 4.390e-23
Identity = 51/75 (68.00%), Postives = 56/75 (74.67%), Query Frame = 1

Query:  214 SKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEV 438
            SKCLDAF+V LNQ CD QEKRWYASTLELQLVSLE CGACR    LHVRVD  TP +LWS  T+     +RS +V
Sbjct:   39 SKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRSRKV 113

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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 7.740e-20
Identity = 66/173 (38.15%), Postives = 88/173 (50.87%), Query Frame = 1

Query:  214 SKCLDAFIVTLNQACDCQEKRWYASTLELQLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEVCTSNRVPAVQAFGWTWELPMN---RVPQRAATELQPGPERRRQNGHSCAAGAGSVVWPENLKRLEYCSDIPMTT----ISWPASLRQLCLFNSFNQAI 711
            S CL    V LN+ CD   K WY ST ELQL SLELC ACR  Q LH+ VD  TP  L ++  +   PS     +C   RVP ++A   TW +P     R    A  ++        + G +      ++VWP  LK +E+    P+      +SWPASLR++CL + FNQ I
Sbjct:  134 SSCLKTLTVALNETCD--GKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADA---PSPHPKRLC-GTRVPRLRARRATWNVPTASGMRTSIFATMDVD-----YLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKVCLGHDFNQPI 295

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1302.1845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FTK8_ECTSI	3.000e-86	67.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KNI6_9PHAE	1.400e-58	61.49	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KLV1_9PHAE	6.630e-49	58.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K8K9_9PHAE	7.340e-40	50.60	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L1V9_9PHAE	1.500e-33	46.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7F9_ECTSI	5.240e-33	48.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LIJ3_9PHAE	7.140e-33	50.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K2L2_9PHAE	7.550e-30	45.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G0Z9_ECTSI	4.390e-23	68.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KPY7_9PHAE	7.740e-20	38.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1302	contig	E-siliculosus-1a_F_contig1302:2003..9135 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	0
Stop	0
Cds size	1614
Model size	1614
Exons	3
Hectar predicted targeting category	other localisation

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1302.1845.1	prot_E-siliculosus-1a_F_contig1302.1845.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1302 2003..9135 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927825.705349-CDS-E-siliculosus-1a_F_contig1302:2002..2085	1622927825.705349-CDS-E-siliculosus-1a_F_contig1302:2002..2085	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1302 2003..2085 +
1696318696.3325543-CDS-E-siliculosus-1a_F_contig1302:2002..2085	1696318696.3325543-CDS-E-siliculosus-1a_F_contig1302:2002..2085	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1302 2003..2085 +
1622927825.7200658-CDS-E-siliculosus-1a_F_contig1302:5946..6071	1622927825.7200658-CDS-E-siliculosus-1a_F_contig1302:5946..6071	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1302 5947..6071 +
1696318696.340231-CDS-E-siliculosus-1a_F_contig1302:5946..6071	1696318696.340231-CDS-E-siliculosus-1a_F_contig1302:5946..6071	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1302 5947..6071 +
1622927825.7294457-CDS-E-siliculosus-1a_F_contig1302:7729..9135	1622927825.7294457-CDS-E-siliculosus-1a_F_contig1302:7729..9135	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1302 7730..9135 +
1696318696.3552167-CDS-E-siliculosus-1a_F_contig1302:7729..9135	1696318696.3552167-CDS-E-siliculosus-1a_F_contig1302:7729..9135	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1302 7730..9135 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1302:2003..9135+
coding sequence from alignment at E-siliculosus-1a_F_contig1302:2003..9135+

protein sequence of mRNA_E-siliculosus-1a_F_contig1302.1845.1

>prot_E-siliculosus-1a_F_contig1302.1845.1 ID=prot_E-siliculosus-1a_F_contig1302.1845.1|Name=mRNA_E-siliculosus-1a_F_contig1302.1845.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=538bp
GAPLPLSCHTAASTESKAGGTAPNLRQRPIGRSGRPHTGLHRLLLSTDRP
SQERLHCDRRRAVAMASTEGGSKCLDAFIVTLNQACDCQEKRWYASTLEL
QLVSLELCGACRRAQLLHVRVDEDTPSTLWSSGTSHTIPSQRSPEVCTSN
RVPAVQAFGWTWELPMNRVPQRAATELQPGPERRRQNGHSCAAGAGSVVW
PENLKRLEYCSDIPMTTISWPASLRQLCLFNSFNQAIADVAWPASLKQLS
FGEDFNQPIVGATWPTSLQQLHFGWFFDQPILGAAWPASLQQICFSGCFN
QPIVGATWPVSLKQLSFGYMFNQQVAEVVWPASLLQLSLGGKFNQPIVGA
TWPVSLLQLTFDQDFNQAIAEVEWPASLQELSFGSMFNQGIADVVWPASL
QQLSFGNSFNKPIARATWPASLKQLTFLVRFNQPIVGATWPASLKQLTFS
QHFNQPIVGVVWPASLQQLSFGWYFNQRIADVVWPASLQQLSIGNTFNKP
IVRATWPVSLKQLSFGHEFNQPIIDVVWPISLQELSFG

mRNA from alignment at E-siliculosus-1a_F_contig1302:2003..9135+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1302.1845.1 ID=mRNA_E-siliculosus-1a_F_contig1302.1845.1|Name=mRNA_E-siliculosus-1a_F_contig1302.1845.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7133bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1302:2003..9135+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCGCACCTTTGCCGCTTTCTTGCCACACAGCAGCGTCGACAGAGAGCAA
AGCGGGAGGGACGGCGCCTAATCTCCGACAAAGGTATGCTGGATGTTGGA
GTACTTGCACGCACAGTGAAACACAGGTGTTTGGTCCGATGGCATCCGAA
CGGTATCAGACAGTTTGCCGAGCGCATGCCCCACTTTCCACAAGACAGCC
AGCGAGATCACGAGCCGAATCAAACGAACACAGAGTAGTATTTTCTCTCT
ACACGAGGTCGGCACCGTGCAGCCGAACCCCGATTGTCTCTCGTATGCAT
ACTCAGCTCACGTTCCCATCTGGTTTAATGGGAATGACTTTATCGAGCCA
GAGAGAGAGCGAGGTCAAACCTGAATACTCTTGTTGGGTCCTGGGGGAAC
TGCGGTACTGCTGTGGGGTGGAGGGTGCGGTGAGCATCAAGAGCAGGTCG
GAAATTCCTGGGTGGTTCACGCAGTAAACCTCTCCGCGGAGCGTTCTTGT
TTTTGAAATTATAACGGAACGGTGTGGAGCGGTTTATCCGAGGGCAAACG
TCGCACGAAGCGGATTTTTGTTTTTTTTTTCATGGCACGGAGCGGTTTTT
CCGTAGTACGTTTTTCTCACGGCGCGGTTTACTCCGTAGCATAAAACCGC
GCGAAACCGTGGCCTTGAGGACGGTGCACCGTCAGAAAAAATCCATGGAA
ACCGCACGGACATCCTCACAAATGTACAAATCGACGGAGTACCTGCAATT
CCGTGAGAAACGTTGGGTTTGGTACACCGAAGATCGATTTTTCCGAACTG
TGTGCGGTGCGTGGGGGCAACCGGTGACAGCGTACGGGTCCTGGCCGCCA
GGACAGCCCAAACAGACCAAAAAGCTCTCAATAGACGGTTTCGGAAGTAT
TCTTGGCAAAAGTTCACTTTCACTTTTAACAGCACCGTTCCTGGGACCAG
TCCCGTTTTTTCCGAAGGTTTACTTTTAACGATGTGATGTCACGATGTCA
CCAGGAGGGAATCTCATCAGCACGGCCCGCGACCAAGTCACCATATCTCC
CTAACAGATGCTTGCATTCGGGTGGAACCTTCGACGCTGTGTGCTCCACA
GCTCTGAGGTACCTTGCCACCAACCGAGATGGGTCTGAGTGGAGCGCTGC
GAGCGTCTTGCGAGAGAGGACGCGACGTTTTTGAGCTGGAATGCATATGC
ACGCACCCAGACAGGGTGTGCGCACGCAGCAACAAACGCACGCAGCACGC
CCAAACGCTCGTCGCTCTCTCGTAACGCATCCCCCCAATCGTCAAGCCAG
AGCCAACAACGCACAAGGCAGCAAGATGCCCTAGGATTTGTTGTGGATCA
TGCTGCACTACATCGTTTTGGGCGATCGATGCGAGTATAGTATTAGGTGT
CCGGCCGCTGCTGCTGTGGGCGGGGGTGTGTATGTTCGAAAAAAATATGA
GCGAGCTGTGGCCCGACATCCAATTTGACAAGTCTAAACCTTCGTCAGCG
CCGAAGAAGGAGTCCTCCCACTGCTGGCAGTAAGCTCTACAACCGACCGC
GGGCATGCGTTGGCGGGGTGAGGTGTGCAACAGCACCCATCCTGGCGTGG
TGTTCACCAAAGCAGCTAAAAGCTAAAGGATGAAAAAACTTGAAAAAGTT
CAGTTTTAACAGACGCCAGCTGCCCTTCGTGCTAAAAAAGTCTTCCTAGG
GTCGAAAGTTCATTTTTATGGCGGCCAAAAACTGGCTCTTTTCTCTAAAA
AGTGAAAGTGAAATTTTCAAAACGTACATCCGAAACTCGCTAATAAACCA
ATTACTCAAGTGTTTCAGAAACGAATCGATCCCCACATCGATACCTACTC
GACGCATGCATTTCTGCAACACGTACAACAAAAGCAGATGATTCCTCACT
TGCCTCTCTTTGAAACAGGCCAGCACTTTGGTAGCACCAGGCGTCTCATG
TATTCAATCAAATATGCCCCTATTTCACTCAGTCGGATTCGACCTTGACA
ACCACTTGCCCTCCCGCACGAGCGGCTTGGACAGAGAGATGCAGCTTTCG
CCTTCCCAACAGACTGCGCTGCAAGCAGCTTCCCCACGCCATTGTCCAAC
TTCTTGATCTCGAGAAAAAGATGGGGTTAGCAAAACCACCAGGACCAGTG
CCAGCACAAGCACCACGAGGAGAGCGGTCGCTAGAAGGGCGGTCGCCGTG
TTCGGGTGTCGACTCCATCAGAGAGATGCTGACGTCCACACGACTGGTGT
GCACGTAGTGTGTGGGGGGTGGGGACTATCTGTGTGGTGCGTGGGCACGG
TTGATTATTGTGTGGCTGCTGTGAACATAGAAAATATCGTGCTCCGTGGG
CAATAACCGCGCCTCAGTGGTAAAACCGTGACTGTATTGCGTTTTTTATC
GCGGTTGTGTGACGGAGTAGCTCAACCCGCTCCGTGAAAAAACTGCTTGT
GTTTTCGGGAATCCCCACGGAGCAGAGCGGTTTATCCGAGGACCAATTTC
TCACGGCGCGGAGCTTTTTTCTTGTTCATGTCACGGAGCGGAGCGGTGTT
TCCTCAAGGGAAAATCTTACGGAGCAGAGCGCTCCGTGGAAAGAAAAGCA
CTCCGTGACCGACCCTGAGAAATTCAGCTCACCGCGGATTGTGTGTGTTG
AGTGTGCTCAGCCCCTGGCGATAAGAACCCCGACACCAACAGTTTGTGCA
CCAGAAGTGCGTTTCTATCGCACAGGGACTGGCCAACTTGGCTTGGTAGC
GGTACAATGTTGGACGATCCAAACGACCGGAAATGTCGTTACAACAAGGA
CCGGAAATCCTTCGCAGTCTAGCCGTCCGCCTCATTGGGGGGCGGCGGGC
CAATCATTTCCCCTCGTTTACTACTACTGTCGGTGTTTCTGTTTTTTTTT
CACTGGTTGAATTGTTACCCCTCTAGTTATTTTTCTTCTGTTTCGTTGGC
CTTCCAGGTCAATACATTGTAGTTTACAGTTACCCTCTTTATTGCCCTTC
TGCCTGCGACCACGTGGATCGCCTGCGACAAGTGGGAAATCGATACGGAC
AGGGGAAGGTACTTGGCGCAGAGGAGCTCGAACCGGTATTTAGTGTTAAC
ACAACAACAACAACAACAACAACAACAACAGCAACACGTTTAACACCTGA
CGCATGGCCAACGCGTGGACAGTGGTAACCAGTGGTGACAGCGTTTAGTT
CAACTGAACTTTCGCGTTTGCATCGCCCGGTGGAAACGAGAGGCCATCTA
ACAAAATAAGAAAAGCTCTTGGAGAACCAGCACGGTTGCCCGAGGCAAGC
TGAGATACCAATCACAGACCAGTGTGGTCAACTCTGGTTTCAAACTGCTG
CTAACCATCTGATGCAGCGATTGTTATTCCGTGCCCGGAAATTGCAGTAC
GCGCCAATAGCTGTGGAAAATCAATGGACAAGACACCGCGTAGTAAGCGC
CAAGATCAGATACTACTACTGATTGGTAGAAACCAAGTTGAATCCCGCCG
TCTTCTTCAATTGCAACGCACATTCCGCAGACACATTGTTGTTTTTGACC
ATGCAGTGTACCGTAGTTCCATTGCTTGCGAAAAAATTGGATCATTCACT
TAGGATACGATTTTACTGCTGTCTATGGTGCCCCCGCCGTACATTTATGT
CCGGAAGCACGCTTTGCCGTCGCGGCATCCATCACATCCTGTGAACCTTG
GCCTGTAGGCGACAAGTCCGGGCTCGCAAATACCTAGTGTCAACATCAGG
TCAAGCCTCAATCTCTTCTGTTGTCATGGCCGAGTATCGGCGATTGCATT
TGAGTTTGGAGTACAATCCTCGGCTGAGCGTGTATCCGTACCCATTCTAT
CCAATATTTCATGAAGAATTTGAGCCTTTGCCTTCTATCGAAATATTTCC
TAACTGCGAACCCGCATCGTGTGTATCATGTTCCTGGCCGGCAGACCCAT
TGGCAGATCCGGCCGACCTCACACGGGGCTTCACCGTCTGCTTCTGAGCA
CTGATCGACCCTCGCAAGAACGCCTACACTGCGATCGGAGAAGAGCAGTC
GCCATGGCTAGCACCGAAGGTGAGAGGGCTGGGTTCAGTTATGGCTGCGT
CGAAAAAAGTGGCACTATTACGTGGACCTACTTTTTGGGGAAATAGGTCT
TGGTTGTCTTGCCACAACCTCCATGATACAATATTAGGCCGTGTGCATAC
ATACTTCGTTCGGTGGCGAGGGGGGCTGGTTCTCCACCACAACGAAAGAG
CCGAAGCTACAAACGGCCGGCGCATTGCTACGTCGAAATCAAACCAGGTT
TCATAATCCCGCCCGTCGGCCGCCGGCCTTGCTGCGACAAGTCTATACCA
CACAAGCACATCATACCCGTTCGGTCTTGTCCGCCGAGACTTTTATTTGT
GGTCGGGAGAAAGGCGGGTATGATTGTGTACAGTGCCGGACCGCTGGAAA
GAAGGAACCTCGGAAACGTTGAGCCTCAGATTGATGAACACAAAGAAGGA
ACACGTCAGACGTATAGTCTATTTGCTGGACACGCACACGAAACAGTGGG
TAATGCAAGGTTTTCTTTAGAATTTGTCGACATGCACTGCTGGCTGGCAA
GAGGGAAATTTAGAGAAGTAGGAAGCACATGTAGCCAAACACGCTCAGTC
AAACCTATACAATGTTGACAGAACAAATATCATTTCACACTCTGCGGCAA
TCAAACGTGTTGAGCCTCGTCCGAAACGGTTGTCGCTTACGAGCGGACCG
GCATTGTAAGTCGAAACAAGCGCACCAGCGCATCGAGCTGGCAAGAAGCA
GTATAACGCAGGCGAGCTACATAGCAAGTGCGACCTCGCAAGGGCAGGGG
AACATGAGGGTGATCGTTAAGGATTCATATTCACTAAACATGTGTTGTGG
AAGGTGAAACTTTGCGGACGCCTGTAGCGAAATCAAGACGAGGCGCACTA
CAGTAGTTCCCCACCACAGAGGCACAATTGCTGCTTGAAAACGTGGCTCT
AGCCCGGGACAAAGTAACCCTACCCCCCGGCGACAAATGCGTGGAGATTA
ACGTCCTTGCATGCCCCGAAGAAATGGACGTGGGCACCAGTAAGGATCAG
CATCTCTTTGGTATTCGAGATACAGGTCATTGACGATGCAGGCAGACGAA
GTGATAGTGATGGGTTTGATGGCCACGTTGGGCCTGTGGACCTGTTGACC
CAGCGTTGCCGGGAACAGTGGCCAAGGGCGTGGTTGGCTTATACTGTAGT
TACCTCGCCTTCATGAGGGCGGTTTCAATCGAGTATGCTCCGCTTGCATG
CGAAAGGCCCACGTCGCGACTGCCGTAAGCAAAACAACCCAGATGCCTTC
ATCTTCTTTGAGTCTCGCAGCGGCTTTCAACGGAATGGTAGTTTGGCCAG
CCCCACCTATCGTGCGAAGGACCGGTGCGCGTCGTCGAGCTTGAACAGAA
GAGACAGTGGTCAATCACAGGGCACCTCGTGTGTGATTTTGCTTGAACAG
AAGAGACAGTGGTCAATCACAGGGCACCTCGTGTGTGATTTTACCAATGG
ATGCTGATTGTGGCGGTCCGTAGGCTGTGACCTTGTAACTATCAACTCGG
AGCACCCGAATCCCCTCCATACTTTCCTAGCCCCGCCTTCACCCATGCAG
GCGCGTAGCAAGTCCCGAGGCCCACAACACCATTAACTTCCGTTCCTCCT
GCATATATCTTGGGTCCACTGTCTCAGGAGGGAGCAAGTGCCTGGACGCA
TTTATTGTCACGTTGAACCAGGCTTGCGATTGCCAAGAGAAGCGTTGGTA
TGCATCTACGCTGGAGCTGCAGCTTGTTTCGCTGGAGCTTTGTGGGGCGT
GCAGACGTGCCCAGCTGTTGCACGTGCGAGTCGACGAAGACACACCATCT
ACCTTGTGGTCTTCTGGCACATCGCACACCATACCCAGCCAGCGCAGTCC
AGAGGTTTGCACCTCGAATCGCGTGCCGGCTGTGCAGGCTTTCGGTTGGA
CGTGGGAGCTTCCGATGAACCGCGTGCCGCAGAGGGCTGCAACTGAGCTG
CAACCAGGGCCCGAACGTCGGCGGCAAAATGGCCACTCATGTGCAGCAGG
CGCAGGGTCGGTGGTTTGGCCTGAAAATCTCAAACGGCTGGAATATTGTT
CGGACATACCGATGACGACAATATCGTGGCCTGCCTCCCTGCGGCAGCTA
TGTTTGTTTAACTCCTTCAACCAGGCCATCGCCGACGTCGCGTGGCCGGC
CTCCCTGAAGCAGCTGTCGTTTGGTGAAGACTTCAACCAGCCCATCGTCG
GAGCCACGTGGCCGACCTCCCTGCAGCAGCTACACTTCGGATGGTTCTTC
GACCAGCCCATCTTAGGAGCCGCGTGGCCGGCCTCCCTGCAGCAGATATG
TTTCAGTGGTTGCTTCAACCAACCTATCGTCGGAGCCACGTGGCCGGTCT
CCCTGAAGCAGCTATCATTTGGGTATATGTTCAACCAGCAGGTGGCCGAG
GTTGTGTGGCCAGCCTCCCTTCTGCAGCTATCCCTTGGGGGCAAATTCAA
CCAGCCTATCGTCGGAGCCACGTGGCCGGTCTCCCTGCTGCAGCTAACGT
TCGATCAAGACTTCAACCAGGCTATCGCCGAAGTCGAATGGCCGGCCTCC
CTTCAGGAGCTATCATTTGGATCTATGTTCAACCAGGGCATCGCCGACGT
CGTGTGGCCGGCCTCCCTTCAGCAGCTATCCTTTGGCAATTCATTCAACA
AACCTATCGCCAGGGCCACGTGGCCGGCCTCCCTGAAGCAGCTAACGTTT
TTGGTGAGGTTCAACCAGCCCATCGTCGGAGCCACGTGGCCGGCCTCCCT
GAAGCAGCTAACGTTTAGTCAACACTTCAACCAGCCTATCGTCGGAGTTG
TATGGCCGGCCTCCCTGCAGCAGCTATCCTTTGGTTGGTACTTCAATCAG
CGTATCGCCGACGTCGTGTGGCCGGCCTCCCTTCAGCAGCTATCCATTGG
CAATACATTCAACAAGCCTATCGTCAGGGCCACGTGGCCGGTCTCCCTGA
AGCAGCTATCGTTTGGACACGAATTCAACCAGCCCATCATAGACGTCGTT
TGGCCGATCTCGCTTCAGGAGCTATCCTTTGGC

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1302:2003..9135+

>mRNA_E-siliculosus-1a_F_contig1302.1845.1 ID=mRNA_E-siliculosus-1a_F_contig1302.1845.1|Name=mRNA_E-siliculosus-1a_F_contig1302.1845.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3228bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1302:2003..9135+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCGCACCTTTGCCGCTTTCTTGCCACACAGCAGCGTCGACAGAGAGCAA
AGCGGGAGGGACGGCGCCTAATCTCCGACAAAGGGCGCACCTTTGCCGCT
TTCTTGCCACACAGCAGCGTCGACAGAGAGCAAAGCGGGAGGGACGGCGC
CTAATCTCCGACAAAGACCCATTGGCAGATCCGGCCGACCTCACACGGGG
CTTCACCGTCTGCTTCTGAGCACTGATCGACCCTCGCAAGAACGCCTACA
CTGCGATCGGAGAAGAGCAGTCGCCATGGCTAGCACCGAAGACCCATTGG
CAGATCCGGCCGACCTCACACGGGGCTTCACCGTCTGCTTCTGAGCACTG
ATCGACCCTCGCAAGAACGCCTACACTGCGATCGGAGAAGAGCAGTCGCC
ATGGCTAGCACCGAAGGAGGGAGCAAGTGCCTGGACGCATTTATTGTCAC
GTTGAACCAGGCTTGCGATTGCCAAGAGAAGCGTTGGTATGCATCTACGC
TGGAGCTGCAGCTTGTTTCGCTGGAGCTTTGTGGGGCGTGCAGACGTGCC
CAGCTGTTGCACGTGCGAGTCGACGAAGACACACCATCTACCTTGTGGTC
TTCTGGCACATCGCACACCATACCCAGCCAGCGCAGTCCAGAGGTTTGCA
CCTCGAATCGCGTGCCGGCTGTGCAGGCTTTCGGTTGGACGTGGGAGCTT
CCGATGAACCGCGTGCCGCAGAGGGCTGCAACTGAGCTGCAACCAGGGCC
CGAACGTCGGCGGCAAAATGGCCACTCATGTGCAGCAGGCGCAGGGTCGG
TGGTTTGGCCTGAAAATCTCAAACGGCTGGAATATTGTTCGGACATACCG
ATGACGACAATATCGTGGCCTGCCTCCCTGCGGCAGCTATGTTTGTTTAA
CTCCTTCAACCAGGCCATCGCCGACGTCGCGTGGCCGGCCTCCCTGAAGC
AGCTGTCGTTTGGTGAAGACTTCAACCAGCCCATCGTCGGAGCCACGTGG
CCGACCTCCCTGCAGCAGCTACACTTCGGATGGTTCTTCGACCAGCCCAT
CTTAGGAGCCGCGTGGCCGGCCTCCCTGCAGCAGATATGTTTCAGTGGTT
GCTTCAACCAACCTATCGTCGGAGCCACGTGGCCGGTCTCCCTGAAGCAG
CTATCATTTGGGTATATGTTCAACCAGCAGGTGGCCGAGGTTGTGTGGCC
AGCCTCCCTTCTGCAGCTATCCCTTGGGGGCAAATTCAACCAGCCTATCG
TCGGAGCCACGTGGCCGGTCTCCCTGCTGCAGCTAACGTTCGATCAAGAC
TTCAACCAGGCTATCGCCGAAGTCGAATGGCCGGCCTCCCTTCAGGAGCT
ATCATTTGGATCTATGTTCAACCAGGGCATCGCCGACGTCGTGTGGCCGG
CCTCCCTTCAGCAGCTATCCTTTGGCAATTCATTCAACAAACCTATCGCC
AGGGCCACGTGGCCGGCCTCCCTGAAGCAGCTAACGTTTTTGGTGAGGTT
CAACCAGCCCATCGTCGGAGCCACGTGGCCGGCCTCCCTGAAGCAGCTAA
CGTTTAGTCAACACTTCAACCAGCCTATCGTCGGAGTTGTATGGCCGGCC
TCCCTGCAGCAGCTATCCTTTGGTTGGTACTTCAATCAGCGTATCGCCGA
CGTCGTGTGGCCGGCCTCCCTTCAGCAGCTATCCATTGGCAATACATTCA
ACAAGCCTATCGTCAGGGCCACGTGGCCGGTCTCCCTGAAGCAGCTATCG
TTTGGACACGAATTCAACCAGCCCATCATAGACGTCGTTTGGCCGATCTC
GCTTCAGGAGCTATCCTTTGGCGAGGGAGCAAGTGCCTGGACGCATTTAT
TGTCACGTTGAACCAGGCTTGCGATTGCCAAGAGAAGCGTTGGTATGCAT
CTACGCTGGAGCTGCAGCTTGTTTCGCTGGAGCTTTGTGGGGCGTGCAGA
CGTGCCCAGCTGTTGCACGTGCGAGTCGACGAAGACACACCATCTACCTT
GTGGTCTTCTGGCACATCGCACACCATACCCAGCCAGCGCAGTCCAGAGG
TTTGCACCTCGAATCGCGTGCCGGCTGTGCAGGCTTTCGGTTGGACGTGG
GAGCTTCCGATGAACCGCGTGCCGCAGAGGGCTGCAACTGAGCTGCAACC
AGGGCCCGAACGTCGGCGGCAAAATGGCCACTCATGTGCAGCAGGCGCAG
GGTCGGTGGTTTGGCCTGAAAATCTCAAACGGCTGGAATATTGTTCGGAC
ATACCGATGACGACAATATCGTGGCCTGCCTCCCTGCGGCAGCTATGTTT
GTTTAACTCCTTCAACCAGGCCATCGCCGACGTCGCGTGGCCGGCCTCCC
TGAAGCAGCTGTCGTTTGGTGAAGACTTCAACCAGCCCATCGTCGGAGCC
ACGTGGCCGACCTCCCTGCAGCAGCTACACTTCGGATGGTTCTTCGACCA
GCCCATCTTAGGAGCCGCGTGGCCGGCCTCCCTGCAGCAGATATGTTTCA
GTGGTTGCTTCAACCAACCTATCGTCGGAGCCACGTGGCCGGTCTCCCTG
AAGCAGCTATCATTTGGGTATATGTTCAACCAGCAGGTGGCCGAGGTTGT
GTGGCCAGCCTCCCTTCTGCAGCTATCCCTTGGGGGCAAATTCAACCAGC
CTATCGTCGGAGCCACGTGGCCGGTCTCCCTGCTGCAGCTAACGTTCGAT
CAAGACTTCAACCAGGCTATCGCCGAAGTCGAATGGCCGGCCTCCCTTCA
GGAGCTATCATTTGGATCTATGTTCAACCAGGGCATCGCCGACGTCGTGT
GGCCGGCCTCCCTTCAGCAGCTATCCTTTGGCAATTCATTCAACAAACCT
ATCGCCAGGGCCACGTGGCCGGCCTCCCTGAAGCAGCTAACGTTTTTGGT
GAGGTTCAACCAGCCCATCGTCGGAGCCACGTGGCCGGCCTCCCTGAAGC
AGCTAACGTTTAGTCAACACTTCAACCAGCCTATCGTCGGAGTTGTATGG
CCGGCCTCCCTGCAGCAGCTATCCTTTGGTTGGTACTTCAATCAGCGTAT
CGCCGACGTCGTGTGGCCGGCCTCCCTTCAGCAGCTATCCATTGGCAATA
CATTCAACAAGCCTATCGTCAGGGCCACGTGGCCGGTCTCCCTGAAGCAG
CTATCGTTTGGACACGAATTCAACCAGCCCATCATAGACGTCGTTTGGCC
GATCTCGCTTCAGGAGCTATCCTTTGGC