prot_E-siliculosus-1a_F_contig1290.1773.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1290.1773.1
Unique Name	prot_E-siliculosus-1a_F_contig1290.1773.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	109

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: D8LU17_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU17_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 2.890e-21
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0

Query:    6 NLGMRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRKWHQRQPGHQPQ 56
            N GMRRSC EC R+K+KCDGLTPCSRCL+ G RCTY+KRKWHQRQPGH+ Q
Sbjct:   89 NAGMRRSCSECVRKKRKCDGLTPCSRCLKAGARCTYTKRKWHQRQPGHRQQ 139

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BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 3.070e-18
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0

Query:    3 IPNNLGMRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRKWHQRQPGHQPQ------PLAPSTWSCCHAVDGLI 73
            + NNLGMRRSC EC R+K+KCDG+ PCSRCL++GV+CTYSKRK HQ Q  HQ Q         PST    H+  G +
Sbjct:   12 VANNLGMRRSCCECGRKKRKCDGMAPCSRCLRSGVQCTYSKRKPHQPQTQHQHQRRPRGPACMPSTELLRHSSSGAL 88

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BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: D8LU21_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU21_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.430e-17
Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0

Query:    5 NNLGMRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRKWHQRQPG--HQPQPLAPS 61
            NNLGMR+SC  C R+K+KCDGL PCSRCL  GVRCTY KRK HQ QPG  HQ +P  P+
Sbjct:   14 NNLGMRKSCCACGRKKRKCDGLMPCSRCLGAGVRCTYRKRKPHQPQPGRQHQRRPRGPA 72

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BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 6.900e-17
Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 0

Query:    5 NNLGMRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRKWHQRQPG--HQPQPLAPS 61
            NNLGMR+SC  C R+K+KCDGL PCSRCL+ GVRCTYSKRK HQ Q G  HQ +P  P+
Sbjct:   14 NNLGMRKSCGACGRKKRKCDGLMPCSRCLRAGVRCTYSKRKPHQPQLGRQHQRRPRGPA 72

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BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: D8LU13_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 9.100e-15
Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 0

Query:    4 PNNLGMRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRKWHQRQPG---HQPQP 57
            P   GMRRSC EC R+KK CDG  PC RC++TG  CTYSKR+WH  QP    HQP+P
Sbjct:   18 PTLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGSNCTYSKRRWHLPQPHGQQHQPRP 74

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BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: A0A6H5JZG3_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG3_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.440e-12
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0

Query:    2 PIPNNLGMRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRKWHQRQPGHQ 54
            P P  LGMRRSC EC R+K+KCDGL PC RC+ +G RC Y KR+ H  +  H+
Sbjct:    7 PTPATLGMRRSCSECGRKKRKCDGLMPCRRCVDSGSRCVYEKRRCHLPRAHHE 59

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BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: D8LU27_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU27_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.010e-10
Identity = 39/72 (54.17%), Postives = 45/72 (62.50%), Query Frame = 0

Query:    9 MRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRK--WHQRQPGHQPQPLA--PSTWSCCHAVDGLIIQR 76
            MRRSC ECAR KKKCDGLTPCSRC+  GV+C Y KRK    Q Q   Q + LA   ST    H++ G  + R
Sbjct:   17 MRRSCCECARHKKKCDGLTPCSRCIGAGVQCIYIKRKSTHPQYQRKQQLRGLAGTQSTELQRHSLSGAFLAR 88

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BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 2.860e-10
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0

Query:    4 PNNLGMRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRKWHQRQPGHQPQ 56
            P   GMRRSC EC R+KK+CDG  PC RC+ +G +C Y  R+WH  +P HQ Q
Sbjct:   24 PTLPGMRRSCTECGRKKKRCDGQQPCRRCVGSGGQCAYIMRRWHLLKP-HQQQ 75

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: D8LU16_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU16_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.170e-8
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0

Query:    8 GMRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRK---------WHQRQP 51
            G+RRSC EC R+KK+CDG  PC RC+++G +CTYSKR+          H RQP
Sbjct:   27 GIRRSCSECGRKKKRCDGQRPCRRCVRSGSQCTYSKRRRRLLQTHKQTHLRQP 79

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Match: D8LCU9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU9_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 3.020e-8
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0

Query:    9 MRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRKWH---QRQPGHQPQ 56
            M RSC ECAR+KK CDG  PC RC+++G +CTYS+R+ +    R   HQPQ
Sbjct:    1 MCRSCSECARKKKSCDGKRPCGRCVRSGDQCTYSERRRYGERARMRQHQPQ 51

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1290.1773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
D8LU17_ECTSI	2.890e-21	78.43	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
A0A6H5JBJ1_9PHAE	3.070e-18	55.84	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
D8LU21_ECTSI	1.430e-17	67.80	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
A0A6H5K8E7_9PHAE	6.900e-17	67.80	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
D8LU13_ECTSI	9.100e-15	61.40	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
A0A6H5JZG3_9PHAE	1.440e-12	56.60	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
D8LU27_ECTSI	1.010e-10	54.17	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
A0A6H5JYW4_9PHAE	2.860e-10	54.72	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
D8LU16_ECTSI	1.170e-8	52.83	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
D8LCU9_ECTSI	3.020e-8	54.90	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	SMART	SM00066	gal4_2	coord: 7..50 e-value: 4.1E-9 score: 46.3
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PFAM	PF00172	Zn_clus	coord: 11..45 e-value: 9.1E-9 score: 35.3
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS00463	ZN2_CY6_FUNGAL_1	coord: 12..39
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS50048	ZN2_CY6_FUNGAL_2	coord: 12..41 score: 10.623
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	GENE3D	4.10.240.10		coord: 8..60 e-value: 1.4E-10 score: 42.9
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	SUPERFAMILY	57701	Zn2/Cys6 DNA-binding domain	coord: 9..48
None	No IPR available	PANTHER	PTHR47540:SF2		coord: 10..62
None	No IPR available	PANTHER	PTHR47540	FAMILY NOT NAMED	coord: 10..62

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1290	contig	E-siliculosus-1a_F_contig1290:30419..31533 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1290.1773.1	mRNA_E-siliculosus-1a_F_contig1290.1773.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1290 30372..33496 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1290.1773.1 ID=prot_E-siliculosus-1a_F_contig1290.1773.1|Name=mRNA_E-siliculosus-1a_F_contig1290.1773.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=109bp
MPIPNNLGMRRSCLECARRKKKCDGLTPCSRCLQTGVRCTYSKRKWHQRQ
PGHQPQPLAPSTWSCCHAVDGLIIQRIPNLRHATFEEVQIEHISGDWSGG
HGGERIPQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036864	Zn2-C6_fun-type_DNA-bd_sf
IPR001138	Zn2-C6_fun-type_DNA-bd