mRNA_E-siliculosus-1a_F_contig12808.1724.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig12808.1724.1
Unique NamemRNA_E-siliculosus-1a_F_contig12808.1724.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A0F9Y8Z5_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9Y8Z5_9ZZZZ)

HSP 1 Score: 570 bits (1470), Expect = 1.030e-204
Identity = 289/312 (92.63%), Postives = 305/312 (97.76%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWKSA 936
            MPHAVILDA+SLGP+IDLTAI+ETVSHLEVF+QSST QALERLANADIAIVNKVVLDA+TL++LPKLRLICVLATGLNNIDLETAKD+NIEVKNVAAYGTASVSQHTLMLML LANRLPLYQRD+AAGEWQRS FFCLQDHPTLQLA KHLVMVGQGELGSEVARLAEAFG+RVTFAARPGNEAND+RASLDDLLPDAD+ISLHCPLSDATKHLINS+RLANAKPSLLL+NCARGGVIDE+AALEALRSGKLGGLGVDVLP EPPK GHPLLDAL EPLNLIVTPHNAWITPEARQNIV+LTAKNISEWKSA
Sbjct:    1 MPHAVILDAESLGPKIDLTAIEETVSHLEVFQQSSTDQALERLANADIAIVNKVVLDANTLQQLPKLRLICVLATGLNNIDLETAKDRNIEVKNVAAYGTASVSQHTLMLMLALANRLPLYQRDVAAGEWQRSAFFCLQDHPTLQLAGKHLVMVGQGELGSEVARLAEAFGMRVTFAARPGNEANDQRASLDDLLPDADVISLHCPLSDATKHLINSERLANAKPSLLLVNCARGGVIDELAALEALRSGKLGGLGVDVLPAEPPKDGHPLLDALSEPLNLIVTPHNAWITPEARQNIVALTAKNISEWKSA 312
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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A651DNS8_HALSX (D-2-hydroxyacid dehydrogenase n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651DNS8_HALSX)

HSP 1 Score: 542 bits (1397), Expect = 1.420e-193
Identity = 273/311 (87.78%), Postives = 295/311 (94.86%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWKS 933
            MPHAVILDAQSLGP+IDLTAIKE+VSHLEV+EQSST QALERLANADIAIVNKV+LDA+TL++LPKLRLICVLATGLNNIDL+ AK  NIEVKNV+AYGTASVSQHTLMLMLTLANRLPLYQRD+AAGEWQRS FFCLQDH TLQLA KHLVMVGQGELGSEVARLAEAFG+RVTFAARPGNEA DKRASLDDLLPDADIISLHCPL+++T+HLIN QRLANAKPSLLL+NCARG +IDE+AAL+ALRSGKLGGL VDVLP EPP  GHPLLDAL EPLNLIVTPHNAWITPEARQNIV+LTA NI++WKS
Sbjct:    1 MPHAVILDAQSLGPEIDLTAIKESVSHLEVYEQSSTGQALERLANADIAIVNKVILDAETLQQLPKLRLICVLATGLNNIDLDAAKANNIEVKNVSAYGTASVSQHTLMLMLTLANRLPLYQRDLAAGEWQRSPFFCLQDHVTLQLAGKHLVMVGQGELGSEVARLAEAFGMRVTFAARPGNEAQDKRASLDDLLPDADIISLHCPLNESTRHLINQQRLANAKPSLLLVNCARGSIIDEVAALDALRSGKLGGLAVDVLPAEPPTEGHPLLDALSEPLNLIVTPHNAWITPEARQNIVALTANNIAQWKS 311
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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A2A3XFW7_9GAMM (Glycerate dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A3XFW7_9GAMM)

HSP 1 Score: 538 bits (1386), Expect = 6.720e-192
Identity = 271/312 (86.86%), Postives = 293/312 (93.91%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWKSA 936
            MPHAVILDA+SLGPQIDL AI+E+VSHLEVFEQSST QA ERLA+ADIAIVNKVVLDA TL++LPKLRLICVLATGLNNIDLETAK  NIEVKNVAAYGTASVSQHTLMLML+LANRLPLYQRD+AAG+WQRSDFFCLQD+PTLQL+ KHLVMVGQGELGSEVARLAEAFG+ V+F ARPGNE NDKR SLDDLL DAD+ISLHCPLSDATKHLIN +RLA AKPSLLLINCARGG+IDE+AAL+ALRSGKLGGL VDVLP EPP+ GHPLLDAL EPLNLIVTPHNAW+TPEARQNIVSLTA NISEWK++
Sbjct:    1 MPHAVILDAKSLGPQIDLAAIRESVSHLEVFEQSSTQQAAERLADADIAIVNKVVLDAKTLQQLPKLRLICVLATGLNNIDLETAKANNIEVKNVAAYGTASVSQHTLMLMLSLANRLPLYQRDVAAGKWQRSDFFCLQDYPTLQLSGKHLVMVGQGELGSEVARLAEAFGMNVSFTARPGNETNDKRPSLDDLLDDADVISLHCPLSDATKHLINRERLAKAKPSLLLINCARGGMIDEVAALDALRSGKLGGLAVDVLPAEPPRNGHPLLDALAEPLNLIVTPHNAWVTPEARQNIVSLTANNISEWKTS 312
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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A365TT32_9GAMM (Glycerate dehydrogenase n=1 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A365TT32_9GAMM)

HSP 1 Score: 532 bits (1371), Expect = 1.250e-189
Identity = 269/312 (86.22%), Postives = 293/312 (93.91%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWKSA 936
            M HAVILDAQSLGP IDL+AI+E+V+HLEVFEQS+T QALERL  ADIAIVNKVVLDA+TL++LP L+LICVLATGLNNIDLETAK QNIEVKNVAAYGTASVSQHTLML+L LANRLP YQRD+AAGEWQRSDFFCLQD+PTLQL+DKHLVMVGQGELG+EVARLAEAFG+RVTFAARPGNEAND+R +LDDLL DAD+ISLHCPLS+ATKHLIN +RLA AKPSLLL+NCARGGVIDE+AALEALRSG+LGGLGVDVLP EPPK GHPLL+AL EPLNLIVTPHNAWITPEARQNIVSLTA NI  WKSA
Sbjct:    1 MSHAVILDAQSLGPGIDLSAIRESVTHLEVFEQSTTQQALERLTKADIAIVNKVVLDAETLQQLPNLKLICVLATGLNNIDLETAKAQNIEVKNVAAYGTASVSQHTLMLILALANRLPRYQRDVAAGEWQRSDFFCLQDYPTLQLSDKHLVMVGQGELGTEVARLAEAFGMRVTFAARPGNEANDQRPALDDLLADADVISLHCPLSNATKHLINRERLARAKPSLLLVNCARGGVIDEVAALEALRSGQLGGLGVDVLPAEPPKEGHPLLEALSEPLNLIVTPHNAWITPEARQNIVSLTATNIRAWKSA 312
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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A265E055_9GAMM (2-hydroxyacid dehydrogenase n=23 Tax=Halomonas TaxID=2745 RepID=A0A265E055_9GAMM)

HSP 1 Score: 531 bits (1369), Expect = 2.610e-189
Identity = 269/311 (86.50%), Postives = 293/311 (94.21%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWKS 933
            MPHAVILDAQSLGP+I+LTAIKE+VS+LEVFEQS+T QA ERLANADIAIVNKV+LDA+TL++LPKLRLICVLATGLNNIDLE+AK+ NIEVKNVAAYGTASVSQHTLMLML LANRLP YQRD+AAGEWQRS FFCLQD+PTLQL+ K LVMVGQGELG+EVARLAEAFG++VTFAARPGNEANDKR +LDDLLPDAD+ISLHCPLS+ATKHLIN +RLA AK SL+LINCARGGVIDE+AALEALRSGKLGGLGVDVLP EPP+  HPLLDALGEPLNLIVTPHNAWITPEARQNIV LTA NI EWKS
Sbjct:    1 MPHAVILDAQSLGPEINLTAIKESVSNLEVFEQSTTQQAQERLANADIAIVNKVMLDAETLQQLPKLRLICVLATGLNNIDLESAKEHNIEVKNVAAYGTASVSQHTLMLMLALANRLPQYQRDVAAGEWQRSAFFCLQDYPTLQLSGKQLVMVGQGELGTEVARLAEAFGMQVTFAARPGNEANDKRPALDDLLPDADVISLHCPLSEATKHLINRERLARAKNSLILINCARGGVIDEVAALEALRSGKLGGLGVDVLPAEPPRDSHPLLDALGEPLNLIVTPHNAWITPEARQNIVGLTANNILEWKS 311
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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A0D5M4M5_9GAMM (Glycerate dehydrogenase n=3 Tax=Halomonas TaxID=2745 RepID=A0A0D5M4M5_9GAMM)

HSP 1 Score: 531 bits (1368), Expect = 3.710e-189
Identity = 267/312 (85.58%), Postives = 292/312 (93.59%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWKSA 936
            MPHAVILDAQSLGP+I+L+AIKE+VSHLEVFEQS+T QALERL NADIAIVNKVVLDA+TL++LPKLRLICVLATGLNNIDL TAK+Q I VKNVAAYGTASVSQHTLMLML LANRLP YQRD+AAGEWQRS FFCLQD+PTLQL+ KHLVMVGQGELG+EVARLAEAFG++VTFAARPGNEAND+R +LD+LLPDAD+ISLHCPLSDATKHLIN +RL+  KPSLLL+NCARGGVIDEIAALEALR+GKLGGLGVDVLP EPP+ GHPLLDAL E LNLIVTPHNAWITPEARQNIVSLTA NI +WK A
Sbjct:    1 MPHAVILDAQSLGPEINLSAIKESVSHLEVFEQSTTQQALERLTNADIAIVNKVVLDAETLQQLPKLRLICVLATGLNNIDLNTAKEQGIAVKNVAAYGTASVSQHTLMLMLALANRLPRYQRDVAAGEWQRSAFFCLQDYPTLQLSGKHLVMVGQGELGTEVARLAEAFGMQVTFAARPGNEANDERPALDELLPDADVISLHCPLSDATKHLINQERLSRVKPSLLLVNCARGGVIDEIAALEALRNGKLGGLGVDVLPAEPPREGHPLLDALNESLNLIVTPHNAWITPEARQNIVSLTANNIRDWKDA 312
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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A101D4K2_9GAMM (Glycerate dehydrogenase n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A101D4K2_9GAMM)

HSP 1 Score: 527 bits (1358), Expect = 1.190e-187
Identity = 268/312 (85.90%), Postives = 289/312 (92.63%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWKSA 936
            MPHAVILDAQSLGP I++ AI+E+V+HLEVFEQS+T QALERLA+ADIAIVNKVVLDA+TL++LPKLRLICVLATGLNNID+E AK QNI VKNV AYGTASVSQHTLMLML LANRLPLYQRD+AAG+WQ S FFCLQDHPTLQLA K LVMVGQGELGSEVARLAEAFG+RVTFAARPGNEANDKR SLDDLLPDADIISLHCPLS+ATKHLIN +RLA AK SLLLINCARGG+IDE+AALEALR+GKLGGL VDVLP EPPK GHPLL+AL EPLNLI+TPHNAWITPEARQNIVSLTA NI  WKSA
Sbjct:    1 MPHAVILDAQSLGPDINVDAIRESVTHLEVFEQSTTQQALERLADADIAIVNKVVLDANTLQQLPKLRLICVLATGLNNIDIEAAKAQNIMVKNVTAYGTASVSQHTLMLMLALANRLPLYQRDVAAGKWQHSAFFCLQDHPTLQLAGKQLVMVGQGELGSEVARLAEAFGMRVTFAARPGNEANDKRPSLDDLLPDADIISLHCPLSEATKHLINRERLARAKASLLLINCARGGIIDEMAALEALRNGKLGGLAVDVLPTEPPKDGHPLLEALNEPLNLIITPHNAWITPEARQNIVSLTADNIRAWKSA 312
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A511UK17_9GAMM (Glycerate dehydrogenase n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511UK17_9GAMM)

HSP 1 Score: 523 bits (1348), Expect = 3.980e-186
Identity = 263/310 (84.84%), Postives = 287/310 (92.58%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWK 930
            MPHAVILDAQSLGP IDL AI+E+V+ L+VFEQS+T QALERLANADIAIVNKVVLDA+TLR+LPKLRLICVLATGLNNI LE AK+QNI+V NVAAYGTASVSQHTLML+L LANRLP YQRD+AAGEWQRS FFCLQD+PTLQLADKHLV+VGQGELG+EVARLAEAFG+RV+FAARPGNEANDKR +LDDLLP+ADIISLHCPL++ T HLIN QRLA  KPSLLL+NCARGG+IDEIAALEALR+GKLGGL VDVLP EPPK GHPLLDAL EPLNLIVTPHNAW+TPEARQNIVSLTA NI  WK
Sbjct:    1 MPHAVILDAQSLGPGIDLAAIRESVTRLDVFEQSTTQQALERLANADIAIVNKVVLDAETLRQLPKLRLICVLATGLNNIGLEAAKEQNIKVSNVAAYGTASVSQHTLMLILALANRLPRYQRDVAAGEWQRSAFFCLQDYPTLQLADKHLVVVGQGELGTEVARLAEAFGMRVSFAARPGNEANDKRPALDDLLPEADIISLHCPLNEDTHHLINQQRLAKVKPSLLLVNCARGGIIDEIAALEALRNGKLGGLAVDVLPTEPPKNGHPLLDALSEPLNLIVTPHNAWVTPEARQNIVSLTADNIDAWK 310
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A1A0FAC8_9GAMM (Glycerate dehydrogenase n=5 Tax=Halomonas TaxID=2745 RepID=A0A1A0FAC8_9GAMM)

HSP 1 Score: 505 bits (1300), Expect = 8.440e-179
Identity = 254/312 (81.41%), Postives = 284/312 (91.03%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWKSA 936
            MP+AVILDA+SLGPQIDLTAI++ VSHLEVF QS+T QA ERLA ADIAIVNKVVLDA+TL +LP L+LICVLATGLNNIDLETA  + I VKNVAAYGTASVSQHTLMLMLTLANRLPLYQRD+AAG WQ+SDFFCLQ +PT+QL+ KHLVMVGQGELGSEVARLAEA G+RVTFAARPGNEAND RASLDDLLP+AD+ISLHCPL+DAT+HLIN+ RLA AK SLLL+NCARGGVIDE AAL ALR G++GGL VDVLP+EPP+ GHPLLDAL E LNLIVTPHNAWITPEARQNIV LTA+NI +W+++
Sbjct:    1 MPNAVILDAESLGPQIDLTAIRQAVSHLEVFGQSTTQQARERLAKADIAIVNKVVLDAETLNQLPSLKLICVLATGLNNIDLETAHARGIAVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDVAAGAWQKSDFFCLQHYPTMQLSGKHLVMVGQGELGSEVARLAEALGMRVTFAARPGNEANDNRASLDDLLPEADVISLHCPLNDATRHLINASRLARAKSSLLLVNCARGGVIDEHAALSALRDGQIGGLAVDVLPNEPPREGHPLLDALDEALNLIVTPHNAWITPEARQNIVGLTAENIQQWQAS 312
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Match: A0A0P7Y1S8_9GAMM (Glycerate dehydrogenase n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A0P7Y1S8_9GAMM)

HSP 1 Score: 504 bits (1299), Expect = 1.200e-178
Identity = 253/312 (81.09%), Postives = 285/312 (91.35%), Query Frame = 1 
Query:    1 MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAIVNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGTASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKHLVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADIISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSGKLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVSLTAKNISEWKSA 936
            MP+AVILDA+SLGPQIDL AI+  VS+L++F QS+T QA ERLANADIAIVNKVVLDADTL++LP L+LICVLATGLNNIDL+ AK Q IEVKNV AYGTASVSQHTLMLMLTLANRLPLYQRD+AAG WQRSDFFCLQD+PTLQLA KHLVMVGQGELGSEVARLAEA G+RV+FAARPGNEAND+RASLD+LLPDAD+ISLHCPL+++TKHLIN+ RLA AK SLLLINCARGG+IDE AAL ALR+ ++GGL VDVLP EPP+ GHPLL AL EPLNLIVTPHNAWITPEARQN+VSLTA NI +W+++
Sbjct:    1 MPNAVILDAESLGPQIDLAAIRNEVSNLDIFGQSTTQQARERLANADIAIVNKVVLDADTLKQLPTLKLICVLATGLNNIDLDAAKQQGIEVKNVTAYGTASVSQHTLMLMLTLANRLPLYQRDVAAGAWQRSDFFCLQDYPTLQLASKHLVMVGQGELGSEVARLAEALGMRVSFAARPGNEANDQRASLDELLPDADVISLHCPLNESTKHLINAARLARAKSSLLLINCARGGIIDEEAALAALRNHQIGGLAVDVLPKEPPRDGHPLLTALNEPLNLIVTPHNAWITPEARQNVVSLTADNIRQWQAS 312
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12808.1724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F9Y8Z5_9ZZZZ1.030e-20492.63Uncharacterized protein n=1 Tax=marine sediment me... [more]
A0A651DNS8_HALSX1.420e-19387.78D-2-hydroxyacid dehydrogenase n=1 Tax=Halomonas sp... [more]
A0A2A3XFW7_9GAMM6.720e-19286.86Glycerate dehydrogenase n=2 Tax=Halomonas TaxID=27... [more]
A0A365TT32_9GAMM1.250e-18986.22Glycerate dehydrogenase n=1 Tax=Halomonas sulfidae... [more]
A0A265E055_9GAMM2.610e-18986.502-hydroxyacid dehydrogenase n=23 Tax=Halomonas Tax... [more]
A0A0D5M4M5_9GAMM3.710e-18985.58Glycerate dehydrogenase n=3 Tax=Halomonas TaxID=27... [more]
A0A101D4K2_9GAMM1.190e-18785.90Glycerate dehydrogenase n=1 Tax=Halomonas sp. 54_1... [more]
A0A511UK17_9GAMM3.980e-18684.84Glycerate dehydrogenase n=1 Tax=Halovibrio variabi... [more]
A0A1A0FAC8_9GAMM8.440e-17981.41Glycerate dehydrogenase n=5 Tax=Halomonas TaxID=27... [more]
A0A0P7Y1S8_9GAMM1.200e-17881.09Glycerate dehydrogenase n=2 Tax=unclassified Halom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12808contigE-siliculosus-1a_F_contig12808:5..943 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size939
Model size939
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.CH
EC1.1.1.29,1.1.1.399,1.1.1.95
EggNOG OGs1MU2D@1224,1RPM1@1236,1XH5M@135619,COG1052@1,COG1052@2
EggNOG free text desc.Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
KEGG ModuleM00020,M00346
KEGG Pathwayko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ReactionR00717,R01388,R01513
KEGG koko:K00018,ko:K00058
KEGG rclassRC00031,RC00042
Preferred namehprA
Seed eggNOG ortholog1380358.JADJ01000001_gene1052
Seed ortholog evalue2.3e-149
Seed ortholog score535.0
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927802.0524678-CDS-E-siliculosus-1a_F_contig12808:4..9431622927802.0524678-CDS-E-siliculosus-1a_F_contig12808:4..943Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12808 5..943 +
1696318685.897846-CDS-E-siliculosus-1a_F_contig12808:4..9431696318685.897846-CDS-E-siliculosus-1a_F_contig12808:4..943Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12808 5..943 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12808.1724.1prot_E-siliculosus-1a_F_contig12808.1724.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig12808 5..943 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig12808.1724.1

>prot_E-siliculosus-1a_F_contig12808.1724.1 ID=prot_E-siliculosus-1a_F_contig12808.1724.1|Name=mRNA_E-siliculosus-1a_F_contig12808.1724.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=313bp
MPHAVILDAQSLGPQIDLTAIKETVSHLEVFEQSSTHQALERLANADIAI
VNKVVLDADTLRKLPKLRLICVLATGLNNIDLETAKDQNIEVKNVAAYGT
ASVSQHTLMLMLTLANRLPLYQRDIAAGEWQRSDFFCLQDHPTLQLADKH
LVMVGQGELGSEVARLAEAFGIRVTFAARPGNEANDKRASLDDLLPDADI
ISLHCPLSDATKHLINSQRLANAKPSLLLINCARGGVIDEIAALEALRSG
KLGGLGVDVLPDEPPKGGHPLLDALGEPLNLIVTPHNAWITPEARQNIVS
LTAKNISEWKSA*
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mRNA from alignment at E-siliculosus-1a_F_contig12808:5..943+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig12808.1724.1 ID=mRNA_E-siliculosus-1a_F_contig12808.1724.1|Name=mRNA_E-siliculosus-1a_F_contig12808.1724.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=939bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12808:5..943+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCACATGCGGTGATACTGGATGCACAAAGTCTTGGACCCCAGATCGA
TTTAACGGCGATTAAGGAAACCGTTTCTCATCTTGAGGTGTTTGAACAGA
GCAGCACTCACCAAGCGTTGGAACGCCTTGCCAACGCTGACATTGCAATC
GTAAACAAGGTCGTGTTGGATGCTGACACGCTGCGAAAACTGCCCAAACT
GCGCTTGATTTGCGTGCTGGCAACTGGGCTCAATAATATTGATCTTGAGA
CGGCTAAAGATCAGAACATTGAGGTTAAAAATGTGGCGGCTTATGGTACG
GCCAGCGTATCACAGCACACCTTAATGCTGATGCTGACGCTGGCCAACCG
GCTGCCACTTTATCAGCGTGATATCGCTGCCGGTGAGTGGCAGCGCAGCG
ATTTTTTCTGTTTGCAGGATCACCCCACGCTGCAACTAGCGGACAAGCAC
TTGGTGATGGTTGGTCAAGGCGAGCTTGGTTCTGAGGTGGCCCGCCTAGC
AGAGGCCTTTGGGATACGCGTCACCTTCGCTGCTCGCCCTGGTAATGAAG
CCAATGACAAGAGAGCCTCGCTAGACGATTTATTGCCTGACGCCGATATT
ATTAGCCTGCACTGCCCACTTAGCGACGCCACAAAGCATTTAATTAATTC
TCAGCGCTTAGCCAACGCTAAGCCATCGCTTTTGCTGATCAACTGTGCAC
GAGGCGGCGTTATCGATGAGATCGCCGCGCTAGAGGCGCTCCGTAGCGGC
AAGCTGGGAGGTTTAGGGGTTGATGTACTACCCGATGAGCCGCCAAAAGG
TGGTCACCCTCTGCTAGATGCCCTTGGTGAGCCACTCAATTTAATTGTGA
CCCCTCATAATGCCTGGATCACGCCCGAAGCGCGCCAAAACATTGTCAGC
CTGACAGCTAAGAATATTAGCGAATGGAAATCGGCATAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12808:5..943+

>mRNA_E-siliculosus-1a_F_contig12808.1724.1 ID=mRNA_E-siliculosus-1a_F_contig12808.1724.1|Name=mRNA_E-siliculosus-1a_F_contig12808.1724.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1878bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12808:5..943+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCACATGCGGTGATACTGGATGCACAAAGTCTTGGACCCCAGATCGA
TTTAACGGCGATTAAGGAAACCGTTTCTCATCTTGAGGTGTTTGAACAGA
GCAGCACTCACCAAGCGTTGGAACGCCTTGCCAACGCTGACATTGCAATC
GTAAACAAGGTCGTGTTGGATGCTGACACGCTGCGAAAACTGCCCAAACT
GCGCTTGATTTGCGTGCTGGCAACTGGGCTCAATAATATTGATCTTGAGA
CGGCTAAAGATCAGAACATTGAGGTTAAAAATGTGGCGGCTTATGGTACG
GCCAGCGTATCACAGCACACCTTAATGCTGATGCTGACGCTGGCCAACCG
GCTGCCACTTTATCAGCGTGATATCGCTGCCGGTGAGTGGCAGCGCAGCG
ATTTTTTCTGTTTGCAGGATCACCCCACGCTGCAACTAGCGGACAAGCAC
TTGGTGATGGTTGGTCAAGGCGAGCTTGGTTCTGAGGTGGCCCGCCTAGC
AGAGGCCTTTGGGATACGCGTCACCTTCGCTGCTCGCCCTGGTAATGAAG
CCAATGACAAGAGAGCCTCGCTAGACGATTTATTGCCTGACGCCGATATT
ATTAGCCTGCACTGCCCACTTAGCGACGCCACAAAGCATTTAATTAATTC
TCAGCGCTTAGCCAACGCTAAGCCATCGCTTTTGCTGATCAACTGTGCAC
GAGGCGGCGTTATCGATGAGATCGCCGCGCTAGAGGCGCTCCGTAGCGGC
AAGCTGGGAGGTTTAGGGGTTGATGTACTACCCGATGAGCCGCCAAAAGG
TGGTCACCCTCTGCTAGATGCCCTTGGTGAGCCACTCAATTTAATTGTGA
CCCCTCATAATGCCTGGATCACGCCCGAAGCGCGCCAAAACATTGTCAGC
CTGACAGCTAAGAATATTAGCGAATGGAAATCGGCATAAATGCCACATGC
GGTGATACTGGATGCACAAAGTCTTGGACCCCAGATCGATTTAACGGCGA
TTAAGGAAACCGTTTCTCATCTTGAGGTGTTTGAACAGAGCAGCACTCAC
CAAGCGTTGGAACGCCTTGCCAACGCTGACATTGCAATCGTAAACAAGGT
CGTGTTGGATGCTGACACGCTGCGAAAACTGCCCAAACTGCGCTTGATTT
GCGTGCTGGCAACTGGGCTCAATAATATTGATCTTGAGACGGCTAAAGAT
CAGAACATTGAGGTTAAAAATGTGGCGGCTTATGGTACGGCCAGCGTATC
ACAGCACACCTTAATGCTGATGCTGACGCTGGCCAACCGGCTGCCACTTT
ATCAGCGTGATATCGCTGCCGGTGAGTGGCAGCGCAGCGATTTTTTCTGT
TTGCAGGATCACCCCACGCTGCAACTAGCGGACAAGCACTTGGTGATGGT
TGGTCAAGGCGAGCTTGGTTCTGAGGTGGCCCGCCTAGCAGAGGCCTTTG
GGATACGCGTCACCTTCGCTGCTCGCCCTGGTAATGAAGCCAATGACAAG
AGAGCCTCGCTAGACGATTTATTGCCTGACGCCGATATTATTAGCCTGCA
CTGCCCACTTAGCGACGCCACAAAGCATTTAATTAATTCTCAGCGCTTAG
CCAACGCTAAGCCATCGCTTTTGCTGATCAACTGTGCACGAGGCGGCGTT
ATCGATGAGATCGCCGCGCTAGAGGCGCTCCGTAGCGGCAAGCTGGGAGG
TTTAGGGGTTGATGTACTACCCGATGAGCCGCCAAAAGGTGGTCACCCTC
TGCTAGATGCCCTTGGTGAGCCACTCAATTTAATTGTGACCCCTCATAAT
GCCTGGATCACGCCCGAAGCGCGCCAAAACATTGTCAGCCTGACAGCTAA
GAATATTAGCGAATGGAAATCGGCATAA
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