mRNA_E-siliculosus-1a_F_contig1248.1543.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 1214 bits (3140), Expect = 0.000e+0 Identity = 640/664 (96.39%), Postives = 651/664 (98.04%), Query Frame = 2
Query: 2555 LDLLASVERPGTTAAGAVSILALIGILVVSTGSVIRSNRGNGSSAXXXXXXXXXXXXXXXGLSGTVDALTPADGTAEGENPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFIHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQASGTLSTLHEEESDMSDEEEGGRRLVPMRNENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGRTGHELTDEEREARDYIRSYTRRQWCGTWCTMLRHNIFACARDTSEGVRKPRSTTAARSGPYPPLDRSNQAGGTEDGGGPPRRPSCNAVGTANTPVIVISDRKE 4546
+D++A VERPGTTAAGAVSILALIGILVVSTGSVIRSNRGNGS XXXXXXXXXXXXXXXGLSGTVD LTPADGTAEGENPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFF+HVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQ SGT STLHEEESDMSDEEEGGR LVPMR+ENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGG LSRF+SSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEW AFA VGV+IENSVVQLVLFCGLHS+MFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGT+RAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALG+TGHELTDEEREAR YIRSYTRRQWCGTWCTMLRHN+FACARDTSEGVRKPR TTAARSGPYPPLDRS QAGGTEDGGGPPRRPSCNAVGTANTPVIVISDRKE
Sbjct: 1104 VDIIAEVERPGTTAAGAVSILALIGILVVSTGSVIRSNRGNGSXXXXXXXXXXXXXXXXXGLSGTVDPLTPADGTAEGENPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTDEEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRKPRFTTAARSGPYPPLDRSKQAGGTEDGGGPPRRPSCNAVGTANTPVIVISDRKE 1767
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 1006 bits (2601), Expect = 0.000e+0 Identity = 556/761 (73.06%), Postives = 583/761 (76.61%), Query Frame = 2
Query: 2369 RASNSGSGCSIGPQLNNLPWNYPGTQRDIYTWG*HGACSGQ*ASDSCTC------------------------------------------------------------GHHR*SA*RHGCHLDLLASVERPGTTAAGAVSILALIGILVVSTGSVIRSNRGNGSSAXXXXXXXXXXXXXXXGLSG-TVDALTPADGTAEGENPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFIHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQASGTLSTLHEEESDMSDEEEGGRRLVPMRNENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGRTGHELTDEEREARDYIRSYTRRQWCGTWCTMLRHNIFACARDTSEGVRKPRSTTAARSGPYPPLDRSNQAGGTEDGG 4468
RASNSG GCSI P+LNN PWNYP TQ I T G + A+ + S +D++A VERPGTTAAGAV+ILALIGILV+STGSVIRSNRGN SSA +VDAL PADGTAE ENPP ASNRRPSATL FVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWW AEVGQNIASDE AFEAGASGI ALVFVGN+ALV GILLAIFFIHVAAVSGVEALWLTKK ARENLDAARRRGAPIGELQARLRG RIICRTNPDLADPSPF+RQAP ASGTLSTL+EEESDMSDEEEGGR VPMR+ENRL+PVATCREHSTSAWLHFPHVELVF FFAFEGAVASFASAIRN ECP+IFYTAIAAMVL PLLMFVTVFRTLLVRVRPNVLLIFKTYAE GT+GDAPSRAGGFLSRF+SSW ENYSLFSWADK QWET QTPDRQ+SREGDW RIGFEPVFV+YTKRGTWFIVISLVEW A ALVGV++ENS+VQLVLFCGL S++F ILMFLKPFANSV NNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLF DEEREARDYIRSYTRRQWCGTWCT+L HN+FACARDTSEGVRKPR TTAARSGPYPPLDRS QAGGTED G
Sbjct: 2 RASNSGFGCSIDPELNNFPWNYPDTQHYI-TSGAYTVAPEATAAPAAAILATVVXXXXXXXXXXXXXRVSTLPRELPTQSPGAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXDSERVTPAPVDIIAEVERPGTTAAGAVTILALIGILVISTGSVIRSNRGNDSSASCGSGSGDSFLGAPVAFRARSVDALAPADGTAERENPPPASNRRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESAFEAGASGIRALVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQARLRGVRIICRTNPDLADPSPFSRQAPHASGTLSTLNEEESDMSDEEEGGRGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLF----------------------------------DEEREARDYIRSYTRRQWCGTWCTVLGHNVFACARDTSEGVRKPRFTTAARSGPYPPLDRSKQAGGTEDNG 727
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 930 bits (2404), Expect = 4.770e-289 Identity = 484/655 (73.89%), Postives = 539/655 (82.29%), Query Frame = 2
Query: 2573 VERPGTTAAGAVSILALIGILVVSTGSVIRSNRGNGSSAXXXXXXXXXXXXXXXGLSGTVDALTPADGTAEGENPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFIHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQASGTLSTLHEEESDMSDEEEGGRRLVPMRNENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGRTGHELTDEEREARDYIRSYTRRQWCGTWCTMLRHNIFACARDTSEGVRKPRSTTAARSGPYPPLDRSNQAGGTEDGGGPPRRPSCNAVGTANTPVIVISD 4537
VE PGT AAGAVSI ALIGI+VVSTGS++RSN GNGS + GL T A+ P T EG++PP S+RRPSATLAFVLMTQLQFLA LSLVDYV+ + SWLADFV GLRWINLWWPA++G++IASD C FE GAS IGALVFVGNLALV+GILLAIFF+HVA VSG EALWLTKKRARENLD ARRR PI EL AR RGGRII +TNP L DPSPFA + P +L + S +DEEEGGR LVPM +ENRLSPVA CREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPE+FYTAIAAMVLYPLLMF TV RTL VRVRP+ LLIFKTY EDGTNG+ P+ GGFLSRF+SSWAENYSLFSWADKGQWETVQTP+R ++REGDWFRIGFEPVFVDYTKRGTWFIVISLVEW + ALVGV+I+NS VQL+LFCGL S MF IL+ LKPFANSVIN I AC+ AIDA+ G+ A +AL WEGT RA +N++V VLQ++SL ALVIPVYLDAVTIVMGAIR RIRKALG+TG +LT E EARDYIR++TRRQWCGTWC MLRHN+FACARDT +GVRKP TAARSGPYPPLD+S GTE GGPPRRPS NA+GT +TPV+V +
Sbjct: 1340 VESPGTIAAGAVSIFALIGIMVVSTGSIVRSNHGNGSVSSAGGAGGASADGSR-GLVDTAGAIAPVGETGEGDSPPRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNP-------SLVRDGSQRTDEEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRKPHLLTAARSGPYPPLDKSIGPDGTEGDGGPPRRPSFNAIGTVHTPVVVSGE 1986
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 910 bits (2351), Expect = 7.470e-282 Identity = 492/656 (75.00%), Postives = 545/656 (83.08%), Query Frame = 2
Query: 2573 VERPGTTAAGAVSILALIGILVVSTGSVIRSNRGNGSSAXXXXXXXXXXXXXXXGLSGTVDALTPADGTAEGENPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFIHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQASGTLSTLHEEESDMSDEEEGGRRLVPMRNENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGRTGHE-LTDEEREARDYIRSYTRRQWCGTWCTMLRHNIFACARDTSEGVRKPRSTTAARSGPYPPLDRSNQAGGTEDGGGPPRRPSCNAVGTANTPVIVISD 4537
VE PGTTAAGAVSI ALIGI+VVSTGS++RSN GNGS + XXXXXXXXXXXXX EG++P S+RRPSATLAFVLMTQLQFLA LSLVDYV+ + SWLADFV GLRWINLWWPAE+G++I SD C FE GAS IGALVFVGNLALV+GILLAIFF+HVA VSG EALWLTKKRARENLD ARRR PI EL AR RGGR+I RTNP L DPSPF + P +L + S +DEEEGGR LVPM +EN+LSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPE+FYTAIAAMVLYPLLMF TV RTL VRVRP+ LLIFKTY EDGTNG+AP+ GGFLS F+SSWAENYSLFSWADKGQWETVQTP+R ++REGDWFRIGFEPVFVDYTKRGTWFIVISLVEW + ALVGV+I+NS VQL+LFCGL S MF IL+ LKPFANSVIN I AC+ AIDA+S G+ A +AL WEGT RA +N++V VLQ++SL ALVIPVYLDAVTIVMGAIRNRIRKALG+TG + L E EARDYIR++TRRQWCGTWC MLRHN+FACARDT EGVRKP TAARSGPYPPLD+S GTE GGPPRRPS NA+GT +TPV+V +
Sbjct: 1299 VESPGTTAAGAVSIFALIGIMVVSTGSIVRSNHGNGSVSSAXXXXXXXXXXXXXXXXXXXXXXXXXX-XXEGDSPSRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNP-------SLVRDRSQRTDEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTGQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRKPHLLTAARSGPYPPLDKSIGPDGTEGDGGPPRRPSFNAIGTVHTPVVVSGE 1946
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 449 bits (1154), Expect = 5.550e-136 Identity = 266/568 (46.83%), Postives = 362/568 (63.73%), Query Frame = 2
Query: 2798 PHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASD-----------ECAFE-AGASGIGALVFVGNLALVIGILLAIFFIHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDL-ADPSPFARQAPQASGTLSTLHEEESDMS---DEEEGGRRLVPMRNENR--LSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAED---GTNGDAPSRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKAL-------GRTGHELTDEEREARDYIRSYTRRQWCGTWCTMLRHNIFACARDTSEGVRKPRSTTAARSGP 4417
PH S R PS T+A +L+TQ+QFLATLSLVD EDS L++ LRW+NLW P VG+ +S C E AS IGALVF+GN+ L +LL I IH+ VS VEA WL+K+RA E L A+RRG PI L AR R R+ +PD +DP A A G +S H + D EE G +P+R+ + + +A CR S+S WL+FPH+EL+FL FAFEGA+AS + +R CP +FY+A A++V+YP+LM + +RT VRV P+ L++FK E+ GT+G P FLS+ R+ E++S+F+WA+ G WETV+TPD + REGD FRIGFEP+FVD+TK+ +WF V L+E T A V++++SVVQL LFCGLHS+ F +L+ +PFANS+IN + AC+T IDA SM + A +A W+ T RA ++T+VVVLQL++L AL+IP+Y+DA T+++GAIR +IR GRT +E +E R +IR Y R W TWC ML N+ AC DT+ G R+ +T+AAR+GP
Sbjct: 41 PHVSVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGAR-RASRVA--HSPDAESDPDELAASASN-DGAMSREHAAADSVDVGVDFEEDG---IPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRS---FLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRT----EEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTRRV-NTSAARTGP 593
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 452 bits (1162), Expect = 7.980e-129 Identity = 280/629 (44.52%), Postives = 362/629 (57.55%), Query Frame = 2
Query: 2825 ATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNI--ASDE-----------------CAFEAGASGIGALVFVGNLALVIGILLAIFFIHVAAVSGVEALWLTKKRARENLDAARRRG-------------------APIGELQARLRGG-----------RIICRTNPDLADPSPFARQ----------APQAS------------GTLSTLHEEES----DMSD-EEEGGRRLVPM-RNENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAP-------SRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGRTG-HELTDEEREARDYIRSYTRRQWCGTWCTMLRHNIFACARDTSEGVRKPRSTTA-----------ARSGPYP 4423
A L V +TQLQFLATLSLVD EDS L F RW NLW PA + SDE C+++ G+G+LVF+GN LV G L+ IF +HV+ VSGVEA WL KKRA+E ARR G AP+ E AR GG R R +P L + + Q AP S G +++ D SD +EEGG L + R E+RLSPVA CREHS SAWLHFPHVELVFLFFA+EGAVAS SA+R + CP + A A+V YP+LMFV V RT VRVRPN L++F D GDA +R+ FLS+ R+ W E++SLF+WA+KG WET +T + REG WFRIGFEP+FVD+TK G WF+ +LVEW A +G +I+ SV+QL LFC LH++ F +L+ +PFANSVIN + A + IDA+ M + A SA WEGT A +++ V++LQL +L AL+IP+Y+D I++GAIR+R++K+ T H T+ E+E ++R + RR W TWCTML NIFACA DT EG+R P ++ A AR+GP+P
Sbjct: 758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREGIRPPGTSMAEDRLATSTARAARTGPFP 1386
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 387 bits (993), Expect = 5.620e-113 Identity = 254/640 (39.69%), Postives = 356/640 (55.62%), Query Frame = 2
Query: 2561 LLASVERPGTTAAGAVSILALIGILVVSTGSVIRSNRGNGSSAXXXXXXXXXXXXXXXGLSGTVDALTPADGTAEGENPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAE-----VGQNIASDE-------------CAFEAGASGIGALVFVGNLALVIGILLAIFFIHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPD---LADPSPFARQAPQASGTLSTLHEEESDM-SDEEEGGRRLVPMRNENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGRTGHELTDEEREARDYIRSYTRRQWCGTWCTMLRHNIFACARDTSEGVRKPRSTTAARSG 4414
L+A V+ +AA +S +++G++ + +V+ G SS+ GT A T ++ R PSAT+AFVL +Q+QFLATLS VD E+S +D LRW+NLW P+E + I SDE + S +G+L+F+GNLAL G+L+ IF HV S VEA W+ K+RAR+ + + RRG + E+ L G T D S Q+PQ + + D SDEEEGG R R N + V+ CRE S S WLH+PH+EL+FLFFAFEGAV S +A+R++ I Y A+A +VLYPLLM V V RT V V+P+ L++F + + PS LSR S ++SLFSWADKGQWETVQT + + R+ DWFRIGFEP+F D+T+ G+WFI+ +L+E A + V+++NS +Q +LFC +HS+ F +L+ KPFANSV+N + A V DA+ MG+ A +A + GT AA ++T+V+V+Q L + LVIP+Y+D + G IRNR G + +R R+ + T R W W M+ N+FAC RDT EG+R P T +AR G
Sbjct: 88 LVAEVQEVAVSAASVMSTASVVGVMTSTVVTVL----GGASSSMV--------------AGGTAQAAT------------QSTCRSPSATMAFVLTSQIQFLATLSFVDTTGAEESAFSDLTNNLRWVNLW-PSESFSEGIASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQPTMDDGSSAGSQSSGIMQSPQRMERQAVSPYDGGDSKSDEEEGGPRNT--RPGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPST----LSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNR----KGSVDERENEADRAEREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIRGP--THSARQG 684
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 390 bits (1002), Expect = 9.660e-106 Identity = 253/619 (40.87%), Postives = 357/619 (57.67%), Query Frame = 2
Query: 2804 ASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGAL------------------------------VFVGNLALVIGILLAIFFIHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLA-DPSPFARQAPQASGTLSTLHEEESDMSDEEEGGRRLVPMRNENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAP--SRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGRTGHELTDEEREARDYIRSYTRRQWCGTWCTMLRHNIFACARDTSEG-----------VRKPRSTTAARSGPYPPLDRSNQAGGTEDGGGPPRRPSCNAVGTANTPVIV 4528
+S RRPS T+A V + QLQFLATLSLV EDS L DF LRWINLW PA ++ E G A VFVGNL L + IL IF IH+ SG+EA WL K+ A +++ A+RRG P+ EL ARL +NP DP+ ++++ + + T S E E+D +D EEG V ++LS +A CRE S S WLHFPHVEL++L FAFEGAVA+ SAIR + + A+ A++ +P+LM V T ++R ++F A+D ++ + F S+ R E+YS+F+W++KG+WE+V TPD + R DWFRIGFEP+FVD+T G+WF V +L+E A A+VGV+++NSV+QL LF +++ F +L+ LKPFAN +IN + A V IDA M V A +A W GT+RA+ +++ VV++QLL+L A++IP+Y+D +++G+IR+++R + H DE R YIR Y W +CTM+R N+ A ++TS G VR +TTAAR+GPYPPLD + TE PRRP +GT +TP++V
Sbjct: 2179 SSIRRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARL--------SNPWAPFDPNSESQRSLRTAKT-SGDDEGEADDTDAEEGMPETV---GRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTLAAIIIPLYVDTAFMMVGSIRDKLR-GVREDDHIDADE----RKYIRRYIWGAWAPIFCTMIRKNVLAFLKETSAGYSPSVKVSASHVRALSTTTAARTGPYPPLDTFDFDKPTEFD---PRRP--RELGTVDTPIVV 2775
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 316 bits (810), Expect = 2.100e-90 Identity = 185/422 (43.84%), Postives = 251/422 (59.48%), Query Frame = 2
Query: 3314 ESDMSD-EEEGGRRLVPM-RNENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVE------------------WTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFAN--------------------SVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGRTGHELTDEEREARD-YIRSYTRRQWCGTWCTMLRHNIFACARDTSEGVRKPRSTTA-----------ARSGPYP 4423
++D SD +EEGG L + R E+RLS VA CREHS AWLHFPHVELVFLFFA+EGAVAS SA+R + C + A A+V YP+LMFV V RT VRVRPN ++F LS+ R+ W E++SLF+WA+KG WET +T + + REG WFRIGFEP+FVD+TK G WF+ +LVE W A +G +I+ SV+QL LFC LH++ F +L+ +PFAN SVIN + A + IDA+ M + A SA WEGT A ++++V++LQL + AL+IP+Y+D +++ AIR+R++K + E + D ++R + RR W TWCT+L NIFACA DTSEG+R P ++TA AR+GP+P
Sbjct: 137 DTDCSDYDEEGGGGLGTLTRAESRLSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF-------------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTEAEKVEDLFVRHFIRRSWPRTWCTILGKNIFACASDTSEGIRPPGTSTAEDRLAATTMRAARTGPFP 539
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 330 bits (845), Expect = 1.100e-87 Identity = 218/582 (37.46%), Postives = 308/582 (52.92%), Query Frame = 2
Query: 2813 RRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIAS-------------DECAFEAG-----------ASGIGALVFVGNLALVIGILLAIFFIHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQASGTLSTLHEEESDMSDEEEGGRRLVPMRNENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMV--------LYPLLMFVTVFRTLLVRVRPNVLLIFKTYAED-GTNGDAPSRAGGFLSRFRSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWTAFALVGVIIENSVVQLVLFCGLHSMMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGRTGHELTDEEREARDYIRSYTRRQWCGTWCTMLRHNIFACARDTSEGVRKPRSTT------AARSGPYPPLDRSN 4441
R PS+T+A VL +Q+QFLATLS VD E S L+ LRW+NLW + +AS D+ + E G S +G+ +F+GNLAL G + IF +H+ S VEA WL K+RAR + A G R I +P L + A + ++G + + +E+ ++ G + + V+ CRE S SAWLH+PH+ELVFLFFAFEGAV S SA+R++ +FY A+A + +L F+ VRVR + L++F + D G+ G + S+ + ++ SLF+WADKG W TVQT D R+ DWFRIGFEP++ D+T+ G+WF V +L+EW A + V+++NS VQ LFC LHSM F +L+ KPFANSV+N + A V DA+ MG+ A SA + T A ++ V+V Q L + LV+P+Y+D + +V GAIRNR R +R R++I T R W TW M+ N+FAC RDT EG+R P + A + GPYP N
Sbjct: 98 RNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLSTSGSSTAWSGTRAI--QSPQLMEHQ--ALPSWDSTGRNDSTNVQEAARTNTRAG----------SSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGSTGKST-----LYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVDTLLLVWGAIRNRRGPVKTRDNAA----QRAEREFINRRTLRLWGRTWFNMVGSNVFACVRDTREGIRDPTGSRRQDRLRAGQIGPYPEWSLKN 656 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1248.1543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1248.1543.1 >prot_E-siliculosus-1a_F_contig1248.1543.1 ID=prot_E-siliculosus-1a_F_contig1248.1543.1|Name=mRNA_E-siliculosus-1a_F_contig1248.1543.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=574bp MTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECback to top mRNA from alignment at E-siliculosus-1a_F_contig1248:10353..34389- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1248.1543.1 ID=mRNA_E-siliculosus-1a_F_contig1248.1543.1|Name=mRNA_E-siliculosus-1a_F_contig1248.1543.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=24037bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1248:10353..34389- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1248:10353..34389- >mRNA_E-siliculosus-1a_F_contig1248.1543.1 ID=mRNA_E-siliculosus-1a_F_contig1248.1543.1|Name=mRNA_E-siliculosus-1a_F_contig1248.1543.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3444bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1248:10353..34389- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |