mRNA_E-siliculosus-1a_F_contig1242.1516.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: A0A6H5JXA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA5_9PHAE) HSP 1 Score: 1088 bits (2815), Expect = 0.000e+0 Identity = 578/666 (86.79%), Postives = 598/666 (89.79%), Query Frame = 3
Query: 36 MQEFPLIRELDELFRQDPDIEELGIIFNVPPPPTPAGPPADAACTEETTPSSADVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERVRARHAGSIWHPLDVQEELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVAAPSSVAGPTAAXGRQPEEPPPSSSDNDRRGLYDWEAWGRAVTEWHDGCVREDDKAAAVEDSDEDLEEEHEDTTATEEADFEEAEGALPGAPSGGGPLATFLGQEVRFALKCATDKGAWQFDRQRRHALAYLAFLSYATDRVVLGSRHHQEQPRXXXXXXXRRSQNGNNITQQPVGATGFAGSCRDVAGHVGEAESTAGGCLTYCEVTGAPKLTFPLALLPSPEASVHAGEPEGDDSRN--GGGVAGRGSDGGACPSSGVVAIEESAPVRAALRALNMFVAGLAKADADDNAVGRDRCGGGGIAPYTIRL 2027
MQEFPLI+ELDELFRQDPDIEELGIIF+VPPPPTPAGPPADAAC+EETT SSADVAPEPQFILQEHKLGVSVHSIHPLINEAR AFPV RREYRRLRQAHSSRERMP EES KPK+GRGGALSD AVAAGTLLSVTRALLLVNADH SAWNTRKQLVVDGLCEGSSIPQE+KLLNLIFTKHAKSPNAWAHRRWCWRNNER RARHAGS WH LDVQEEL VCQRVAE+YPKNYYAWTQRSWVVLRA+GGARA+AGAGQE PG+D PTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPAS EMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQ RLV APSSV GPTAAX RGLYDWEAWGRAVTEW+DGCVREDDKAAAVEDSDEDLE+EHEDTTATEEADFEEAEGALPGAPSGGG LATFLGQE RFALKCATDKGAWQFDRQRRHALAYLAFLSYA DR+V GSRHH XXXXXXX GNNI QQPVGA GF GS R VAGHVGEAE TAGGCLTYCEVTGAPKLTFPLALLPSPEASV EGDD+R+ GG VAGRGS GGACPSSGVVA EESA VRA RALNMFV+GLAKADA+DNAVG++RCGGGGIAPYT+ +
Sbjct: 1 MQEFPLIQELDELFRQDPDIEELGIIFSVPPPPTPAGPPADAACSEETTLSSADVAPEPQFILQEHKLGVSVHSIHPLINEARGAFPVTRREYRRLRQAHSSRERMPSEESAKPKEGRGGALSDLAVAAGTLLSVTRALLLVNADHASAWNTRKQLVVDGLCEGSSIPQEVKLLNLIFTKHAKSPNAWAHRRWCWRNNERFRARHAGSTWHQLDVQEELNVCQRVAELYPKNYYAWTQRSWVVLRAVGGARAEAGAGQEGSPGKDTPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQVRLVTAPSSVTGPTAAXXXXXXXXXXXXXXXXHRGLYDWEAWGRAVTEWNDGCVREDDKAAAVEDSDEDLEQEHEDTTATEEADFEEAEGALPGAPSGGGLLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSYAIDRIVAGSRHHXXXXXXXXXXXXXXXX-GNNIIQQPVGAAGFGGSRRGVAGHVGEAEVTAGGCLTYCEVTGAPKLTFPLALLPSPEASVDERGREGDDTRSNVGGDVAGRGSGGGACPSSGVVAAEESAAVRA-FRALNMFVSGLAKADANDNAVGKNRCGGGGIAPYTMEV 664
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: D7G9E1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E1_ECTSI) HSP 1 Score: 981 bits (2537), Expect = 0.000e+0 Identity = 534/657 (81.28%), Postives = 550/657 (83.71%), Query Frame = 3
Query: 96 EELGIIFNVPPPPTPAGPPADAACTEETTPSSAD-VAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERVRARHAGSIWHPLDVQEELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVAAPSSVAGPTAAXGRQPEEPPPSSSDNDRRGLYDWEAWGRAVTEWHDGCVREDDKAAAVEDSDEDLEEEHEDTTATEEADFEEAEGALPGAPSGGGPLATFLGQEVRFALKCATDKGAWQFDRQRRHALAYLAFLSYATDRVVLGSRHHQEQPRXXXXXXXRRSQNGNNITQQPVGATGFAGSCRDVAGHVGEAESTAGG-CLTYCEVTGAPKLTFPLALLPSPEASVHAGEPEGDDSRNGGGVAGRGSDGGACPSSGVVAIEE-----------SAPVRAALRALNMFVAGLAKADADDNAVGRDRCGGGGIAPYTIRL 2027
EELGIIF+VPPPPTPAGPPADAAC EETTPSS D VAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLR+AHSS ERMP EES+KPK+GRGGALS AVAA TLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNER RARHA WHPLD QEELKVCQRVAE+YPKNYYAWTQRSWVVLRA+GGARADA AGQE LPGED PTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPAS EMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLV APSSVAGP A X SD DRRG YDWEAWGRAVTEWHDGCVREDD+AAA ED TTATEE DFEEAEGALPGAPSGGGPLATFLGQE RFALKCATDKGAWQFDRQRRHALAYLAFLS+ATDR+VLGS XXXXXXX TQ+P GATGFAGSC+DVAGHVGEAESTAGG CLTYCEVTGAPKL FPLALLPSPEAS HAG P G DSR GS GG SA VRA LRALN+FVA LAKADADD+AVG++RCGGGGIAPYTI +
Sbjct: 32 EELGIIFSVPPPPTPAGPPADAACPEETTPSSTDDVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRRAHSSLERMPSEESSKPKEGRGGALSGVAVAAATLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERFRARHADITWHPLDEQEELKVCQRVAELYPKNYYAWTQRSWVVLRAVGGARADASAGQEGLPGEDTPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVTAPSSVAGPAAXXXXXXXXXXXXXSDKDRRGSYDWEAWGRAVTEWHDGCVREDDRAAAAEDXXXXXXXXXXXTTATEETDFEEAEGALPGAPSGGGPLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSHATDRIVLGSHXXXXXXXXXXXXXXXXXXXXXXXTQRPAGATGFAGSCKDVAGHVGEAESTAGGGCLTYCEVTGAPKLKFPLALLPSPEASAHAGGPAGHDSR--------GSVGGXXXXXXXXXXXXXXXXXXXXXXXSAAVRA-LRALNLFVAALAKADADDHAVGKNRCGGGGIAPYTIHV 679
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: A0A7S4DGU3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGU3_HETAK) HSP 1 Score: 144 bits (363), Expect = 1.640e-33 Identity = 116/388 (29.90%), Postives = 176/388 (45.36%), Query Frame = 3
Query: 39 QEFPLIRELDELFRQDPDIEELGIIFNVPPPPTPAGPPADAACTEETTPSSADVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWC--------------------------WRNNERVRARHAGSIWHPLDVQE-ELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMAR-----LGLVDKERS------ANSKL-LRDYPGHESLWCYRRFV 1085
++FPL+ +L++LF DP I+E G+IF EE A FIL +HKLG+S+ + PL E+R AF + RR++ + + + G ++ + GR L+ +RALLL+N D +AWNTRK+L++ G + E+K L+L+FTK AK P++WAHR WC W+ + + + +++ + E C V + YP+NYYAW R+ LR + G R A A A++LE E+ RW+ HVSD+SAL +R A+ + A + R +G E A S L L ++PGHE W +RR V
Sbjct: 40 EKFPLLYKLNKLFEADPHIDEYGLIFG----------------EEEGMEGEAK-----GFILIDHKLGISMSILQPLYRESREAFCILRRQW-------NGGQPVGGRKTGLRRPGRM-----------ALVQSSRALLLLNPDQYTAWNTRKELILGGYLDAKD---ELKFLDLVFTKQAKKPSSWAHRSWCMDYIAKEELVKIDAVVEVGVPPEASAWQLQQDQEQKKEKMVAQLIEIADGEFSTCSLVCDRYPRNYYAWRHRA-AALRLVAGGRGQA----------------ADAKVLE-EMRATTRWMRRHVSDYSALTYRLGALVAVVQQTRAWDRLNRETYREVGGASCEHELLFGALARSSLWLDEFPGHEGFWLFRRSV 367
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: K3X844_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X844_GLOUD) HSP 1 Score: 137 bits (344), Expect = 6.950e-31 Identity = 111/364 (30.49%), Postives = 162/364 (44.51%), Query Frame = 3
Query: 51 LIRELDELFRQDPDIEELGIIFNVPPPPTPAGPPADAACTEETTPSSADVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERVRARHAGSIWHPLDVQ------------EELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMAR--LGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARL 1100
L L LF DP I+E+G++F + +ADV + F+L+ HKLGV+ + L +A F L + + + G E +P+ LL TRA+LL+NAD +AWNTRK+ V G + E++ +L+FT H KS + WA+RRW + AR S P D ++++VC+R+AE +NY+AW+ R WVV + D T L RE+E + W SH++DHS NHR++V + +S A LV E SK++ YP HE+LWC+RRFV Q L
Sbjct: 11 LYTRLCALFATDPLIDEIGLVFGI---------------------DAADVTVDNAFVLEAHKLGVAFAAGPTLFKQATTHFYALNPLLIALAKHETQSD---GIEVWRPQ----------------LLDSTRAILLINADFYTAWNTRKEFVRRGWLDALD---ELRFCDLVFTLHPKSIDTWAYRRW-------LAARVVVSFQQPQDDDLSGLEAFDAFYVQQIEVCERLAEQKARNYHAWSYRHWVVSQCA----------------HDDET------RLTRELERMRIWCESHITDHSGWNHRQHVVKLMLHVSKAKHHSVNDVRRLVVAEYELLSKIMALYPTHEALWCHRRFVVQLVL 302
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: A0A067CUI7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUI7_SAPPC) HSP 1 Score: 134 bits (336), Expect = 1.730e-30 Identity = 110/362 (30.39%), Postives = 162/362 (44.75%), Query Frame = 3
Query: 54 IRELDELFRQDPDIEELGIIFNVPPPPTPAGPPADAACTEETTPSSADVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARR--EYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERVRARHAGSIWHPLD---VQEELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVAAPSSVA 1124
+ EL LF DPDI+E+G+I+ PA+A F+L++HKLG+++ + L EA+ F ARR + R+R+A TR +LLV AD +AWN RKQL+V GL S+ EI +N++ + H+KS + WAHRRW V R + PL + +EL +C R+ E YP+NY+AW+ R V PAA L +E++ W HV+DHS NHR+ + + L + L++ E + ++ LLR +PG E+LWC+RR + A L AP A
Sbjct: 7 VAELSALFAADPDIDEIGLIY--------LEDPAEA------------------FVLKDHKLGIALDMLPALHREAKDVFFAARRSNDVDRIREA------------------------------------TRCMLLVCADFYTAWNARKQLLVQGLL---SLRDEITFINVVLSHHSKSIDTWAHRRW-------VLDRLVATT--PLTASFLSDELALCLRLTEQYPRNYHAWSYRYRVCCHLS----------------------PAA---LVQELDTNRAWCERHVADHSGWNHRQLLLARL---------LPSETLLEDEFAFHTPLLRLFPGREALWCHRRALLHAFLTTAPRPCA 260
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: A0A6A7GFL8_9CRUS (Protein prenyltransferase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GFL8_9CRUS) HSP 1 Score: 130 bits (327), Expect = 1.220e-28 Identity = 114/397 (28.72%), Postives = 171/397 (43.07%), Query Frame = 3
Query: 30 NDMQEFPLIRELDELFRQDPDIEELGIIFNVPPPPTPAGPPADAACTEETTPSSADVAPEPQFILQEHKLGVSVHSIHPLINEARAAFP--VARREYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERVRARHAGSIW------HPLDVQE---------ELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMARLGLVDKERSANSK----------------------------LLRDYPGHESLWCYRRFV 1085
+DM+ F + +L + DP I+ELG++ A + + S+AD P FI +EHKLG+S + L A F +A +++ L+ H+ E + K+ + TR +LL+NAD AWN RK L+ + EI+ +NL+F+KH KS AW+HRRW R + +R++ + H +V + E+++C +VAE+YPKNYYAWT R W+V E L++E+ V RW HVSDH +HR+ V S + + L D+ S+NS ++R YPGHESLWCYRRF+
Sbjct: 16 SDMRSF-VYEQLTKQLDDDPLIDELGLVVR-------ASELLFGGNDSKESDSAADDGKGPPFICREHKLGISSWCLPDLYRFATNLFLSLIANIDFKSLQCLHNV-------EISTVKE---------------IHDSTRIILLINADSYRAWNVRKFLIQAFRLKTDD---EIRFMNLVFSKHPKSGEAWSHRRWVLRQVKDFESRNSKQLSDVSSQPHSSNVDDFVRNDHFSTEIRICAQVAEIYPKNYYAWTHRQWLVKLFD-------------------------FEELKQELRRVSRWNDLHVSDHCGFHHRQFVLLCCLERSKLHSGIV-LKDFDEGNSSNSDQFHHEKLESSEDCEFCEIFREEFVYLSDMIRRYPGHESLWCYRRFL 353
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: A0A2P4XM05_9STRA (Rab-protein geranylgeranyltransferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XM05_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.560e-28 Identity = 100/352 (28.41%), Postives = 154/352 (43.75%), Query Frame = 3
Query: 51 LIRELDELFRQDPDIEELGIIFNVPPPPTPAGPPADAACTEETTPSSADVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERVRARHAGSIWHPLDVQEELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMARLG--LVDKERSANSKLLRDYPGHESLWCYRRFVCQARL 1100
L+ L+ LF+QDP I+E+G++F + S+D+ PE F L++HKLGV+ + PL AR F H + EE LS+ LL TRA+LL+NAD +AWNTRK V G + E++ NL+FT H KS + WA+RRW + + +++ Q++++VC R+ E P L+ +E+E +++W +HV+DHS NHR++ + LA +++ L L E S+++ YP HE+LWC+RRFV Q L
Sbjct: 10 LLTRLESLFQQDPLIDEVGLLFGI---------------------ESSDLTPETAFFLEDHKLGVAFAAGIPLFQAARTQF-------------HLLNALLLQEEDEIT-------LSEDNERRAQLLHCTRAILLINADFYTAWNTRKSFVTRGWLDAQD---EVRFTNLVFTLHPKSIDTWAYRRWLAAGLCISLSENELQVFY----QQQIEVCSRLTEQKPXXXXXXXXXXXXXXXXP-------------------------LNLILKELEDMEKWCRTHVTDHSGWNHRQHTLNELAKRYQMCGDVSNLSQNLTLAEYKFVSEVMAPYPTHEALWCHRRFVMQLLL 288
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: A0A0H5RQV7_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RQV7_9EUKA) HSP 1 Score: 127 bits (318), Expect = 4.570e-28 Identity = 103/341 (30.21%), Postives = 147/341 (43.11%), Query Frame = 3
Query: 51 LIRELDELFRQDPDIEELGIIFNVPPPPTPAGPPADAACTEETTPSSADVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERVRARHAGSIWHPLDVQEELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMARLGLVDKERSANSKLLRDYPGHESLWCY 1073
L+ +L + DPDI+ELG++ + AC E PE F + HKLG++ + PLI R A + R S P+ L++ TRA+LL+N DH SAW R+++V GL + E++ LNL+F+KH+KS AWA+RRW + R A L +Q ELK C R+ ++YP+NYYAW R W+ + AP A L ++ W+ H+SD+SA ++R V LA E + L E A L YPGHESLW +
Sbjct: 27 LLAQLTRIVDSDPDIDELGLVLS--------------ACAGEF--GLPATGPETPFFHENHKLGIAFWVV-PLI--MRTALELIR------------------SVSIGPE----------------LMNATRAVLLINPDHYSAWTQRRRMVESGLI---GLLAELRFLNLVFSKHSKSGEAWAYRRW-------LLCRSAAVFDSDL-IQSELKTCDRICDIYPRNYYAWCHRQWIT--------------------DQAPLA------LSARLQESRDWIAMHISDYSACHYRITVIQKLA-------ERGQF-LFRDEFDAAHYLCTTYPGHESLWYF 269
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: A0A1V9YKS2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKS2_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.820e-28 Identity = 90/306 (29.41%), Postives = 144/306 (47.06%), Query Frame = 3
Query: 204 PEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERVRARHAGSIWHPLDVQEELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVAAPSSV 1121
P F+L++HKLGV++ I L EA+ AF G ++ P++ +L +RA+LLV AD +AWN RKQL+ DG + +EI+ +N++ + H+KS + WAHRRW R+ A ++ PL +++EL +C R+ E YP+NY+AW+ R + GA L E++ W HV+DHS NHR+ + L ++P+ L+ E + ++ LLR +P E+LWC+RR + L P++
Sbjct: 17 PSEAFVLEDHKLGVALDMIPALHREAKEAF-------------------FSGRKTNDPQR---------------VLEASRAMLLVCADFYTAWNARKQLITDGYL---GLLEEIQFMNVVLSHHSKSIDTWAHRRWVL---TRLVAATPAAVLQPL-LEQELALCLRLTEQYPRNYHAWSYRYCICGHLPPGA-------------------------LLGELQQNRSWCERHVADHSGWNHRQLLLLRL--VNPS--------LLADEIAFHTPLLRMFPDREALWCHRRALLHGYLQTVPATA 246
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Match: A0A329SYY2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SYY2_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.240e-27 Identity = 93/316 (29.43%), Postives = 145/316 (45.89%), Query Frame = 3
Query: 189 SADVAPEPQFILQEHKLGVSVHSIHPLINEARAAF----PVARREYRRLRQAHSSRERMPGEESTKPKQGRGGALSDAAVAAGTLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRW-CWRNNERVRARHAGSIWHPLDVQEELKVCQRVAEVYPKNYYAWTQRSWVVLRAMGGARADAGAGQESLPGEDAPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASAEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVAAPSSV 1121
S+D+ PE F+L++HKLGV+ + PL AR F + ++E + Q+ ++ R LL TRA+LL++AD +AWNTRK V G + E++ NL+FT H KS + WA+RRW R E + + +++++VC R+AE P+NY V LP +L +E++ ++ W +HV+DHS NHR++ + L + E+ L LV E S ++ YP HE+LWC+RR+V Q L P +
Sbjct: 32 SSDLTPETAFVLEDHKLGVAFAAGIPLFQAARMQFHPLNALLQQEAAEITQSKDNQRRSQ------------------------LLHCTRAILLISADFYTAWNTRKSFVTRGWLDAQD---EVQFTNLVFTLHPKSIDTWAYRRWLAIRLCESLSGEELRVFY-----EQQIEVCSRLAEQKPRNYXXXXXXXXXV---------------SCLP----------MDLARKELQDMEHWCRTHVTDHSGWNHRQHTLNELMKKCRDAGEVD-LSLVLPEYKFVSDIMASYPTHEALWCHRRYVMQCFLNEVPRNA 289 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1242.1516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1242.1516.1 >prot_E-siliculosus-1a_F_contig1242.1516.1 ID=prot_E-siliculosus-1a_F_contig1242.1516.1|Name=mRNA_E-siliculosus-1a_F_contig1242.1516.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=665bp MQEFPLIRELDELFRQDPDIEELGIIFNVPPPPTPAGPPADAACTEETTPback to top mRNA from alignment at E-siliculosus-1a_F_contig1242:26071..31631+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1242.1516.1 ID=mRNA_E-siliculosus-1a_F_contig1242.1516.1|Name=mRNA_E-siliculosus-1a_F_contig1242.1516.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5561bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1242:26071..31631+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1242:26071..31631+ >mRNA_E-siliculosus-1a_F_contig1242.1516.1 ID=mRNA_E-siliculosus-1a_F_contig1242.1516.1|Name=mRNA_E-siliculosus-1a_F_contig1242.1516.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3990bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1242:26071..31631+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |