mRNA_E-siliculosus-1a_F_contig12407.1512.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig12407.1512.1
Unique NamemRNA_E-siliculosus-1a_F_contig12407.1512.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: A0A141BSG9_9PHAE (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=56 Tax=Phaeophyceae TaxID=2870 RepID=A0A141BSG9_9PHAE)

HSP 1 Score: 537 bits (1383), Expect = 4.100e-192
Identity = 264/284 (92.96%), Postives = 275/284 (96.83%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKETENNVFEDA 852
            MKLAVYGKGGIGKSTTSCNISVALCRRGK VLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQG+GGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYD+ILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTH+LRLAGLIGNRTATRDLIDKYI+ V MPVLEVLPLIEDIRVSRVKGKTLFEMTE D+SL YIC+YYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPT+ +T  + F+D+
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKSVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDIILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTATRDLIDKYINVVTMPVLEVLPLIEDIRVSRVKGKTLFEMTEIDNSLSYICEYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTQDKTSLSEFDDS 284
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BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: A0A7S6U9V6_9STRA (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9V6_9STRA)

HSP 1 Score: 537 bits (1383), Expect = 4.100e-192
Identity = 264/291 (90.72%), Postives = 276/291 (94.85%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKE-----TENNVFEDAFD 858
            MKLAVYGKGGIGKSTTSCNISVALCRRGK+VLQIGCDPKHDSTFTLTGFLIPTIIDTLQ KDYHYED+WPEDVIYQG+GGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLI+TDNGFDALFAANRIAASVREKARTH+LRLAGLIGNRTA+RDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTE D SL Y+C+YYLNIADQLIANPEGV+PKEAADRELFSLLSDFYLNP E E     +E N+  + FD
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQTKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTASRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTESDDSLNYVCEYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPKEDENLLHTSETNILSEEFD 291
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BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: A0A8E5XRD2_9PHAE (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRD2_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 2.670e-189
Identity = 261/282 (92.55%), Postives = 274/282 (97.16%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKETENNVFE 846
            MKLAVYGKGGIGKSTTSCNISVAL RRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYED+WPEDVIYQG+G VDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTH+LRLAGLIGNRTATRDLIDKY+DAVPMPVLEVLPLIEDIRVSRVKGKTLFEM+E ++SL Y+C+YYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPT+ +  + +FE
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALSRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDVWPEDVIYQGYGDVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHSLRLAGLIGNRTATRDLIDKYVDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMSELNNSLTYVCEYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTDDDKNDQLFE 282
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BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: B7T1Z8_VAULI (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1Z8_VAULI)

HSP 1 Score: 527 bits (1358), Expect = 2.120e-188
Identity = 260/283 (91.87%), Postives = 270/283 (95.41%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKETENNVFED 849
            MKLAVYGKGGIGKSTTSCNISVAL RRGK++LQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYED+WPEDVIY+G+G VDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTH LRLAGLIGNRT+TRDLI+KYID VPMPVLEVLPLIEDIRVSRVKGKTLFEM EFD+SL Y+CDYYLNIADQLIANPEGV+PKEAADRELFSLLSDFYLNPT   TEN    D
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALSRRGKKILQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDVWPEDVIYKGYGAVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHTLRLAGLIGNRTSTRDLINKYIDTVPMPVLEVLPLIEDIRVSRVKGKTLFEMAEFDNSLEYVCDYYLNIADQLIANPEGVIPKEAADRELFSLLSDFYLNPT---TENQKIND 280
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BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: CHLL_PORPU (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=14 Tax=Bangiaceae TaxID=31345 RepID=CHLL_PORPU)

HSP 1 Score: 522 bits (1345), Expect = 2.030e-186
Identity = 254/286 (88.81%), Postives = 269/286 (94.06%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKETENNVFEDAFD 858
            MKLAVYGKGGIGKSTTSCNISVAL +RGK+VLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYED+WPEDVIY+G+GGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYD+ILFDVLGDVVCGGFAAPLNYADYCLI+TDNGFDALFAANRIAASVREKARTH+LRLAGL+GNRT  RDLIDKYID VPMPVLEVLPLIEDIRVSRVKGKTLFEM E D++L Y+CDYYLNIADQLIA PEGVVPKEAADRELFSLLSDFYLNP    T++   E+  D
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALSKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDVWPEDVIYKGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDIILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLVGNRTDKRDLIDKYIDCVPMPVLEVLPLIEDIRVSRVKGKTLFEMAESDTNLAYVCDYYLNIADQLIARPEGVVPKEAADRELFSLLSDFYLNPKSNTTKSTADEEELD 286
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BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: A0A0K2RWK0_9STRA (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A0K2RWK0_9STRA)

HSP 1 Score: 522 bits (1344), Expect = 3.110e-186
Identity = 252/277 (90.97%), Postives = 267/277 (96.39%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKETE 831
            MKLAVYGKGGIGKSTTSCNISVALCRRGK+VLQIGCDPKHDSTFTLTGFLIPTIIDTLQ+KDYHYED+WPEDVIYQG+GGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRI+ASVREKARTH+LRLAGLIGNRTATRDLIDKYI AVPMPVLEVLPLIEDIR+SRVKGKTLFEM + + SL Y+CDYYLNIADQLIA PEGV+PKE+ DRELFSLLSDFYLNP +  ++
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQSKDYHYEDVWPEDVIYQGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRISASVREKARTHSLRLAGLIGNRTATRDLIDKYITAVPMPVLEVLPLIEDIRISRVKGKTLFEMADIEPSLSYVCDYYLNIADQLIAEPEGVIPKESPDRELFSLLSDFYLNPDDNNSD 277
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BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: A0A1G4NWT5_9FLOR (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A1G4NWT5_9FLOR)

HSP 1 Score: 516 bits (1328), Expect = 7.630e-184
Identity = 250/276 (90.58%), Postives = 264/276 (95.65%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKET 828
            MKLAVYGKGGIGKSTTSCNISVAL +RGK+VLQIGCDPKHDSTFTLTGFLIPTIIDTLQ+KDYHYED+WPEDVIYQG+ GVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASV+EKARTH+LRLAGLIGNRTA RDLIDKYI++VPMPVLEVLPLIEDIR+SRVKGKTLFEM   D  L Y+CDYYLNIADQLIA PEG+VPKEAADRELFSLLSDFYLNP E ++
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALAKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQSKDYHYEDVWPEDVIYQGYAGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVKEKARTHSLRLAGLIGNRTAKRDLIDKYINSVPMPVLEVLPLIEDIRISRVKGKTLFEMASEDKELSYVCDYYLNIADQLIAKPEGIVPKEAADRELFSLLSDFYLNPAENDS 276
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: CHLL_NEOYE (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=10 Tax=Rhodophyta TaxID=2763 RepID=CHLL_NEOYE)

HSP 1 Score: 516 bits (1328), Expect = 7.920e-184
Identity = 250/286 (87.41%), Postives = 265/286 (92.66%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKETENNVFEDAFD 858
            MKLAVYGKGGIGKSTTSCNISVAL +RGK+VLQIGCDPKHDSTFTLTGFLIPTIIDTLQ+KDYHYED+WPEDVIY+G+GGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYD+ILFDVLGDVVCGGFAAPLNYADYCLI+TDNGFDALFAANRIAASVREKARTH+LRLAGL+GNRT  RDLIDKYID VPMPVLEVLPLIEDIRVSRVKGKTLFEM E D  L Y+CDYYLNIADQLI  PEGVVPKE+ DRELFSLLSDFYLNP  K  +  V ++  D
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALSKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQSKDYHYEDVWPEDVIYKGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDIILFDVLGDVVCGGFAAPLNYADYCLIITDNGFDALFAANRIAASVREKARTHSLRLAGLVGNRTDKRDLIDKYIDCVPMPVLEVLPLIEDIRVSRVKGKTLFEMAEIDKDLAYVCDYYLNIADQLITRPEGVVPKESPDRELFSLLSDFYLNPKSKVGQEKVDQEELD 286
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: A0A3G1I8T1_9FLOR (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=4 Tax=Batrachospermaceae TaxID=31371 RepID=A0A3G1I8T1_9FLOR)

HSP 1 Score: 516 bits (1328), Expect = 7.920e-184
Identity = 250/282 (88.65%), Postives = 269/282 (95.39%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKETENNVFE 846
            MKLAVYGKGGIGKSTTSCNISVAL +RGK+VLQIGCDPKHDSTFTLTGFLIPTIIDTLQ+KDYHYED+WPEDVIY+G+G VDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYD+ILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTH+L+LAGLIGNRT+ RDLIDKYID+VPMP+LEVLPLIEDIR+SRVKGKTLFEMTE D +L Y+CDYYLNIADQLIA PEG++PKE+ADRELFSLLSDFYLNP  K +EN   E
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALAKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQSKDYHYEDVWPEDVIYKGYGDVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDIILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHSLKLAGLIGNRTSKRDLIDKYIDSVPMPILEVLPLIEDIRISRVKGKTLFEMTEKDKNLTYVCDYYLNIADQLIAKPEGIIPKESADRELFSLLSDFYLNP--KTSENKKIE 280
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Match: A0A222AH84_9CRYP (Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=7 Tax=root TaxID=1 RepID=A0A222AH84_9CRYP)

HSP 1 Score: 514 bits (1325), Expect = 2.350e-183
Identity = 247/275 (89.82%), Postives = 267/275 (97.09%), Query Frame = 1 
Query:    1 MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVLEVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGVVPKEAADRELFSLLSDFYLNPTEKE 825
            MKLAVYGKGGIGKSTTSCNISVAL +RGK+VLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYED+WPEDVIY+G+ GVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFD+LFAANRI+ASVREK+RTH+LRLAGLIGNRTA RDLI+KY+DAVPMP+LEVLPLIEDIR+SRVKGKTLFEM+E D+SL Y+CDYYLNIADQ+IA PEGVVP EAADRELFSLLSDFYL P++K+
Sbjct:    1 MKLAVYGKGGIGKSTTSCNISVALAKRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQAKDYHYEDVWPEDVIYKGYAGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDSLFAANRISASVREKSRTHSLRLAGLIGNRTAKRDLIEKYVDAVPMPILEVLPLIEDIRISRVKGKTLFEMSELDTSLNYVCDYYLNIADQIIAKPEGVVPNEAADRELFSLLSDFYLTPSDKD 275
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12407.1512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A141BSG9_9PHAE4.100e-19292.96Light-independent protochlorophyllide reductase ir... [more]
A0A7S6U9V6_9STRA4.100e-19290.72Light-independent protochlorophyllide reductase ir... [more]
A0A8E5XRD2_9PHAE2.670e-18992.55Light-independent protochlorophyllide reductase ir... [more]
B7T1Z8_VAULI2.120e-18891.87Light-independent protochlorophyllide reductase ir... [more]
CHLL_PORPU2.030e-18688.81Light-independent protochlorophyllide reductase ir... [more]
A0A0K2RWK0_9STRA3.110e-18690.97Light-independent protochlorophyllide reductase ir... [more]
A0A1G4NWT5_9FLOR7.630e-18490.58Light-independent protochlorophyllide reductase ir... [more]
CHLL_NEOYE7.920e-18487.41Light-independent protochlorophyllide reductase ir... [more]
A0A3G1I8T1_9FLOR7.920e-18488.65Light-independent protochlorophyllide reductase ir... [more]
A0A222AH84_9CRYP2.350e-18389.82Light-independent protochlorophyllide reductase ir... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12407contigE-siliculosus-1a_F_contig12407:433..1302 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size870
Model size870
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.P
EC1.3.7.7
EggNOG OGs2QW4A@2759,COG1348@1
EggNOG free text desc.Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
KEGG ReactionR06282
KEGG koko:K04037
KEGG rclassRC01008
Preferred namechlL
Seed eggNOG ortholog2880.D1J7A6
Seed ortholog evalue1.1e-164
Seed ortholog score585.9
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927763.5090656-CDS-E-siliculosus-1a_F_contig12407:432..13021622927763.5090656-CDS-E-siliculosus-1a_F_contig12407:432..1302Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12407 433..1302 +
1696318670.5314934-CDS-E-siliculosus-1a_F_contig12407:432..13021696318670.5314934-CDS-E-siliculosus-1a_F_contig12407:432..1302Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12407 433..1302 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12407.1512.1prot_E-siliculosus-1a_F_contig12407.1512.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig12407 433..1302 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig12407.1512.1

>prot_E-siliculosus-1a_F_contig12407.1512.1 ID=prot_E-siliculosus-1a_F_contig12407.1512.1|Name=mRNA_E-siliculosus-1a_F_contig12407.1512.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=290bp
MKLAVYGKGGIGKSTTSCNISVALCRRGKRVLQIGCDPKHDSTFTLTGFL
IPTIIDTLQAKDYHYEDIWPEDVIYQGFGGVDCVEAGGPPAGAGCGGYVV
GETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGF
DALFAANRIAASVREKARTHALRLAGLIGNRTATRDLIDKYIDAVPMPVL
EVLPLIEDIRVSRVKGKTLFEMTEFDSSLCYICDYYLNIADQLIANPEGV
VPKEAADRELFSLLSDFYLNPTEKETENNVFEDAFDEIG*
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mRNA from alignment at E-siliculosus-1a_F_contig12407:433..1302+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig12407.1512.1 ID=mRNA_E-siliculosus-1a_F_contig12407.1512.1|Name=mRNA_E-siliculosus-1a_F_contig12407.1512.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=870bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12407:433..1302+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAATTAGCTGTTTATGGTAAAGGTGGGATTGGTAAGTCAACAACAAG
TTGTAACATTTCTGTTGCTTTATGTAGAAGAGGGAAACGTGTATTACAAA
TTGGTTGTGATCCAAAGCATGATAGTACATTCACCTTAACAGGTTTTTTA
ATTCCAACAATCATTGATACTCTACAAGCCAAAGATTATCATTATGAGGA
TATTTGGCCAGAAGATGTTATTTATCAAGGTTTTGGTGGTGTTGATTGTG
TTGAGGCAGGTGGTCCTCCGGCTGGAGCAGGTTGTGGTGGGTATGTTGTT
GGCGAAACAGTAAAACTTTTAAAAGAATTAAATGCATTTGATGAGTATGA
TGTTATTCTATTCGATGTTTTAGGAGATGTAGTTTGTGGTGGTTTTGCTG
CACCATTAAATTACGCAGATTATTGTTTAATTGTAACTGATAATGGTTTT
GATGCTTTATTTGCTGCTAACCGAATTGCTGCCTCTGTTCGCGAAAAAGC
AAGAACACACGCTTTAAGGCTTGCTGGACTGATAGGAAATCGAACAGCGA
CAAGAGATTTAATTGATAAATATATAGATGCTGTTCCAATGCCTGTTTTA
GAAGTTTTACCGCTAATCGAGGATATTAGAGTATCTCGTGTTAAAGGGAA
AACCTTGTTTGAAATGACAGAATTTGATAGTTCTTTATGTTATATTTGCG
ATTATTATCTTAATATAGCTGATCAACTAATAGCAAATCCTGAAGGAGTT
GTACCTAAAGAAGCAGCTGATAGAGAATTATTTAGTCTTCTTTCCGATTT
TTATTTAAATCCTACAGAAAAAGAAACTGAAAATAATGTATTTGAGGACG
CTTTTGATGAAATTGGGTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12407:433..1302+

>mRNA_E-siliculosus-1a_F_contig12407.1512.1 ID=mRNA_E-siliculosus-1a_F_contig12407.1512.1|Name=mRNA_E-siliculosus-1a_F_contig12407.1512.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1740bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12407:433..1302+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAATTAGCTGTTTATGGTAAAGGTGGGATTGGTAAGTCAACAACAAG
TTGTAACATTTCTGTTGCTTTATGTAGAAGAGGGAAACGTGTATTACAAA
TTGGTTGTGATCCAAAGCATGATAGTACATTCACCTTAACAGGTTTTTTA
ATTCCAACAATCATTGATACTCTACAAGCCAAAGATTATCATTATGAGGA
TATTTGGCCAGAAGATGTTATTTATCAAGGTTTTGGTGGTGTTGATTGTG
TTGAGGCAGGTGGTCCTCCGGCTGGAGCAGGTTGTGGTGGGTATGTTGTT
GGCGAAACAGTAAAACTTTTAAAAGAATTAAATGCATTTGATGAGTATGA
TGTTATTCTATTCGATGTTTTAGGAGATGTAGTTTGTGGTGGTTTTGCTG
CACCATTAAATTACGCAGATTATTGTTTAATTGTAACTGATAATGGTTTT
GATGCTTTATTTGCTGCTAACCGAATTGCTGCCTCTGTTCGCGAAAAAGC
AAGAACACACGCTTTAAGGCTTGCTGGACTGATAGGAAATCGAACAGCGA
CAAGAGATTTAATTGATAAATATATAGATGCTGTTCCAATGCCTGTTTTA
GAAGTTTTACCGCTAATCGAGGATATTAGAGTATCTCGTGTTAAAGGGAA
AACCTTGTTTGAAATGACAGAATTTGATAGTTCTTTATGTTATATTTGCG
ATTATTATCTTAATATAGCTGATCAACTAATAGCAAATCCTGAAGGAGTT
GTACCTAAAGAAGCAGCTGATAGAGAATTATTTAGTCTTCTTTCCGATTT
TTATTTAAATCCTACAGAAAAAGAAACTGAAAATAATGTATTTGAGGACG
CTTTTGATGAAATTGGGTAAATGAAATTAGCTGTTTATGGTAAAGGTGGG
ATTGGTAAGTCAACAACAAGTTGTAACATTTCTGTTGCTTTATGTAGAAG
AGGGAAACGTGTATTACAAATTGGTTGTGATCCAAAGCATGATAGTACAT
TCACCTTAACAGGTTTTTTAATTCCAACAATCATTGATACTCTACAAGCC
AAAGATTATCATTATGAGGATATTTGGCCAGAAGATGTTATTTATCAAGG
TTTTGGTGGTGTTGATTGTGTTGAGGCAGGTGGTCCTCCGGCTGGAGCAG
GTTGTGGTGGGTATGTTGTTGGCGAAACAGTAAAACTTTTAAAAGAATTA
AATGCATTTGATGAGTATGATGTTATTCTATTCGATGTTTTAGGAGATGT
AGTTTGTGGTGGTTTTGCTGCACCATTAAATTACGCAGATTATTGTTTAA
TTGTAACTGATAATGGTTTTGATGCTTTATTTGCTGCTAACCGAATTGCT
GCCTCTGTTCGCGAAAAAGCAAGAACACACGCTTTAAGGCTTGCTGGACT
GATAGGAAATCGAACAGCGACAAGAGATTTAATTGATAAATATATAGATG
CTGTTCCAATGCCTGTTTTAGAAGTTTTACCGCTAATCGAGGATATTAGA
GTATCTCGTGTTAAAGGGAAAACCTTGTTTGAAATGACAGAATTTGATAG
TTCTTTATGTTATATTTGCGATTATTATCTTAATATAGCTGATCAACTAA
TAGCAAATCCTGAAGGAGTTGTACCTAAAGAAGCAGCTGATAGAGAATTA
TTTAGTCTTCTTTCCGATTTTTATTTAAATCCTACAGAAAAAGAAACTGA
AAATAATGTATTTGAGGACGCTTTTGATGAAATTGGGTAA
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